RNA–Protein interactions for RNA: ENST00000231130.3

PCDHB3-201, Transcript of protocadherin beta 3, humanhuman

APPRIS P1 BASIC

Gene PCDHB3, Length 3,355 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB3-201ENST00000231130 ATAD3AQ9NVI7 634 aa14.49□□□□□ -0.09
PCDHB3-201ENST00000231130 ASNSD1Q9NWL6 643 aa14.49□□□□□ -0.09
PCDHB3-201ENST00000231130 ARHGAP26Q9UNA1 814 aa14.49□□□□□ -0.09
PCDHB3-201ENST00000231130 SNNO75324 88 aaPredicted RBP14.48□□□□□ -0.09
PCDHB3-201ENST00000231130 SPAG6O75602 509 aa14.48□□□□□ -0.09
PCDHB3-201ENST00000231130 LSM8O95777 96 aaKnown RBP14.48□□□□□ -0.09
PCDHB3-201ENST00000231130 FGF3P11487 239 aaPredicted RBP14.48□□□□□ -0.09
PCDHB3-201ENST00000231130 UGT1A6P19224 532 aa14.48□□□□□ -0.09
PCDHB3-201ENST00000231130 UGT1A1P22309 533 aa14.48□□□□□ -0.09
PCDHB3-201ENST00000231130 UGT1A4P22310 534 aa14.48□□□□□ -0.09
PCDHB3-201ENST00000231130 EPHA3P29320 983 aa14.48□□□□□ -0.09
PCDHB3-201ENST00000231130 CRHR1P34998 444 aa14.48□□□□□ -0.09
PCDHB3-201ENST00000231130 UGT1A3P35503 534 aa14.48□□□□□ -0.09
PCDHB3-201ENST00000231130 UGT1A5P35504 534 aa14.48□□□□□ -0.09
PCDHB3-201ENST00000231130 TUFMP49411 452 aaKnown RBP14.48□□□□□ -0.09
PCDHB3-201ENST00000231130 NEK2P51955 445 aa14.48□□□□□ -0.09
PCDHB3-201ENST00000231130 GBE1Q04446 702 aa14.48□□□□□ -0.09
PCDHB3-201ENST00000231130 TFDP2Q14188 446 aa14.48□□□□□ -0.09
PCDHB3-201ENST00000231130 NR1D2Q14995 579 aa14.48□□□□□ -0.09
PCDHB3-201ENST00000231130 DCDC5Q6ZRR9 648 aa14.48□□□□□ -0.09
PCDHB3-201ENST00000231130 ADGRG6Q86SQ4 1221 aa14.48□□□□□ -0.09
PCDHB3-201ENST00000231130 TMEM174Q8WUU8 243 aa14.48□□□□□ -0.09
PCDHB3-201ENST00000231130 KCNN1Q92952 543 aa14.48□□□□□ -0.09
PCDHB3-201ENST00000231130 ARPC5LQ9BPX5 153 aa14.48□□□□□ -0.09
PCDHB3-201ENST00000231130 COG4Q9H9E3 785 aa14.48□□□□□ -0.09
PCDHB3-201ENST00000231130 FAM49BQ9NUQ9 324 aa14.48□□□□□ -0.09
PCDHB3-201ENST00000231130 GID8Q9NWU2 228 aa14.48□□□□□ -0.09
PCDHB3-201ENST00000231130 SSX2IPQ9Y2D8 614 aa14.48□□□□□ -0.09
PCDHB3-201ENST00000231130 GOLGA8TH3BQL2 631 aa14.48□□□□□ -0.09
PCDHB3-201ENST00000231130 INO80B-WBP1J3KQ70 363 aa14.48□□□□□ -0.09
PCDHB3-201ENST00000231130 APOL1O14791 398 aa14.48□□□□□ -0.09
PCDHB3-201ENST00000231130 CHADO15335 359 aa14.48□□□□□ -0.09
PCDHB3-201ENST00000231130 CNOT3O75175 753 aaKnown RBP14.48□□□□□ -0.09
PCDHB3-201ENST00000231130 USP12O75317 370 aa14.48□□□□□ -0.09
PCDHB3-201ENST00000231130 TKTP29401 623 aaKnown RBP14.48□□□□□ -0.09
PCDHB3-201ENST00000231130 CCND2P30279 289 aa14.48□□□□□ -0.09
PCDHB3-201ENST00000231130 CDKL1Q00532 357 aa14.48□□□□□ -0.09
PCDHB3-201ENST00000231130 Q3C1V9 767 aa14.48□□□□□ -0.09
PCDHB3-201ENST00000231130 PERM1Q5SV97 790 aa14.48□□□□□ -0.09
PCDHB3-201ENST00000231130 MBLAC2Q68D91 279 aa14.48□□□□□ -0.09
PCDHB3-201ENST00000231130 SNRNP48Q6IEG0 339 aaKnown RBP14.48□□□□□ -0.09
PCDHB3-201ENST00000231130 OR52B2Q96RD2 323 aa14.48□□□□□ -0.09
PCDHB3-201ENST00000231130 TMEM79Q9BSE2 394 aa14.48□□□□□ -0.09
PCDHB3-201ENST00000231130 INO80BQ9C086 356 aaPredicted RBP14.48□□□□□ -0.09
PCDHB3-201ENST00000231130 TPK1Q9H3S4 243 aa14.48□□□□□ -0.09
PCDHB3-201ENST00000231130 PPME1Q9Y570 386 aa14.48□□□□□ -0.09
PCDHB3-201ENST00000231130 EIF3FO00303 357 aaPredicted RBP14.48□□□□□ -0.09
PCDHB3-201ENST00000231130 NR4A1P22736 598 aa14.48□□□□□ -0.09
PCDHB3-201ENST00000231130 CDK9P50750 372 aaKnown RBP14.48□□□□□ -0.09
PCDHB3-201ENST00000231130 ZNF132P52740 706 aa14.48□□□□□ -0.09
PCDHB3-201ENST00000231130 BNIP3Q12983 259 aa14.48□□□□□ -0.09
PCDHB3-201ENST00000231130 DLG2Q15700 870 aa14.48□□□□□ -0.09
PCDHB3-201ENST00000231130 CARTPTQ16568 116 aa14.48□□□□□ -0.09
PCDHB3-201ENST00000231130 TMEM198Q66K66 360 aa14.48□□□□□ -0.09
PCDHB3-201ENST00000231130 RNF149Q8NC42 400 aa14.48□□□□□ -0.09
PCDHB3-201ENST00000231130 NLRP4Q96MN2 994 aa14.48□□□□□ -0.09
PCDHB3-201ENST00000231130 RNF157Q96PX1 679 aa14.48□□□□□ -0.09
PCDHB3-201ENST00000231130 CAB39LQ9H9S4 337 aa14.48□□□□□ -0.09
PCDHB3-201ENST00000231130 PALMDQ9NP74 551 aa14.48□□□□□ -0.09
PCDHB3-201ENST00000231130 GMNNO75496 209 aa14.47□□□□□ -0.09
PCDHB3-201ENST00000231130 ALDOAP04075 364 aaKnown RBP14.47□□□□□ -0.09
PCDHB3-201ENST00000231130 ASNSP08243 561 aa14.47□□□□□ -0.09
PCDHB3-201ENST00000231130 MCF2P10911 925 aa14.47□□□□□ -0.09
PCDHB3-201ENST00000231130 XRCC1P18887 633 aaPredicted RBP14.47□□□□□ -0.09
PCDHB3-201ENST00000231130 XKR3Q5GH77 459 aa14.47□□□□□ -0.09
PCDHB3-201ENST00000231130 ZNF667Q5HYK9 610 aa14.47□□□□□ -0.09
PCDHB3-201ENST00000231130 NIPA1Q7RTP0 329 aa14.47□□□□□ -0.09
PCDHB3-201ENST00000231130 TMEM192Q8IY95 271 aa14.47□□□□□ -0.09
PCDHB3-201ENST00000231130 C12orf29Q8N999 325 aa14.47□□□□□ -0.09
PCDHB3-201ENST00000231130 CMASQ8NFW8 434 aaPredicted RBP14.47□□□□□ -0.09
PCDHB3-201ENST00000231130 BORCS5Q969J3 196 aa14.47□□□□□ -0.09
PCDHB3-201ENST00000231130 CEP44Q9C0F1 390 aa14.47□□□□□ -0.09
PCDHB3-201ENST00000231130 XPNPEP3Q9NQH7 507 aa14.47□□□□□ -0.09
PCDHB3-201ENST00000231130 PSMD13Q9UNM6 376 aa14.47□□□□□ -0.09
PCDHB3-201ENST00000231130 IQCA1LA6NCM1 817 aa14.47□□□□□ -0.09
PCDHB3-201ENST00000231130 YDJCA8MPS7 323 aa14.47□□□□□ -0.09
PCDHB3-201ENST00000231130 CCNT2O60583 730 aaKnown RBP14.47□□□□□ -0.09
PCDHB3-201ENST00000231130 TCF7P36402 384 aaPredicted RBP14.47□□□□□ -0.09
PCDHB3-201ENST00000231130 TUBB3Q13509 450 aa14.47□□□□□ -0.09
PCDHB3-201ENST00000231130 TBCCQ15814 346 aa14.47□□□□□ -0.09
PCDHB3-201ENST00000231130 GPR107Q5VW38 600 aa14.47□□□□□ -0.09
PCDHB3-201ENST00000231130 BHLHE22Q8NFJ8 381 aaPredicted RBP14.47□□□□□ -0.09
PCDHB3-201ENST00000231130 MAPK15Q8TD08 544 aa14.47□□□□□ -0.09
PCDHB3-201ENST00000231130 EBNA1BP2Q99848 306 aaKnown RBP14.47□□□□□ -0.09
PCDHB3-201ENST00000231130 NEURL2Q9BR09 285 aa14.47□□□□□ -0.09
PCDHB3-201ENST00000231130 CENPOQ9BU64 300 aa14.47□□□□□ -0.09
PCDHB3-201ENST00000231130 C1orf21Q9H246 121 aa14.47□□□□□ -0.09
PCDHB3-201ENST00000231130 RPAP3Q9H6T3 665 aaPredicted RBP14.47□□□□□ -0.09
PCDHB3-201ENST00000231130 ZNF302Q9NR11 478 aa14.47□□□□□ -0.09
PCDHB3-201ENST00000231130 RNF19AQ9NV58 838 aa14.47□□□□□ -0.09
PCDHB3-201ENST00000231130 MFHAS1Q9Y4C4 1052 aa14.47□□□□□ -0.09
PCDHB3-201ENST00000231130 MICAL2O94851 1124 aa14.47□□□□□ -0.09
PCDHB3-201ENST00000231130 MGAT1P26572 445 aa14.47□□□□□ -0.09
PCDHB3-201ENST00000231130 PTPN7P35236 360 aa14.47□□□□□ -0.09
PCDHB3-201ENST00000231130 GLRBP48167 497 aa14.47□□□□□ -0.09
PCDHB3-201ENST00000231130 THOP1P52888 689 aa14.47□□□□□ -0.09
PCDHB3-201ENST00000231130 CLDN10P78369 228 aa14.47□□□□□ -0.09
PCDHB3-201ENST00000231130 GNA12Q03113 381 aa14.47□□□□□ -0.09
PCDHB3-201ENST00000231130 SCUBE3Q8IX30 993 aa14.47□□□□□ -0.09
PCDHB3-201ENST00000231130 MYO1HQ8N1T3 1032 aa14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms