RNA–Protein interactions for RNA: ENST00000229829.6

HLA-DOA-201, Transcript of major histocompatibility complex, class II, DO alpha, humanhuman

APPRIS P1 BASIC

Gene HLA-DOA, Length 3,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOA-201ENST00000229829 TM7SF2O76062 418 aa9.64□□□□□ -0.87
HLA-DOA-201ENST00000229829 IL18RAPO95256 599 aa9.64□□□□□ -0.87
HLA-DOA-201ENST00000229829 VTNP04004 478 aa9.64□□□□□ -0.87
HLA-DOA-201ENST00000229829 UQCRBP14927 111 aa9.64□□□□□ -0.87
HLA-DOA-201ENST00000229829 VARSP26640 1264 aaKnown RBP9.64□□□□□ -0.87
HLA-DOA-201ENST00000229829 ENTPD1P49961 510 aa9.64□□□□□ -0.87
HLA-DOA-201ENST00000229829 STX3Q13277 289 aa9.64□□□□□ -0.87
HLA-DOA-201ENST00000229829 ITGA7Q13683 1181 aa9.64□□□□□ -0.87
HLA-DOA-201ENST00000229829 FASTKD1Q53R41 847 aaKnown RBP9.64□□□□□ -0.87
HLA-DOA-201ENST00000229829 BOLA3Q53S33 107 aa9.64□□□□□ -0.87
HLA-DOA-201ENST00000229829 RALGPS1Q5JS13 557 aa9.64□□□□□ -0.87
HLA-DOA-201ENST00000229829 LGSNQ5TDP6 509 aa9.64□□□□□ -0.87
HLA-DOA-201ENST00000229829 FAM91A1Q658Y4 838 aa9.64□□□□□ -0.87
HLA-DOA-201ENST00000229829 C16orf87Q6PH81 154 aa9.64□□□□□ -0.87
HLA-DOA-201ENST00000229829 KCNT2Q6UVM3 1135 aa9.64□□□□□ -0.87
HLA-DOA-201ENST00000229829 DHDDSQ86SQ9 333 aa9.64□□□□□ -0.87
HLA-DOA-201ENST00000229829 RSPH3Q86UC2 560 aa9.64□□□□□ -0.87
HLA-DOA-201ENST00000229829 DNAJC5GQ8N7S2 189 aa9.64□□□□□ -0.87
HLA-DOA-201ENST00000229829 DEPDC1BQ8WUY9 529 aa9.64□□□□□ -0.87
HLA-DOA-201ENST00000229829 CASP10Q92851 521 aa9.64□□□□□ -0.87
HLA-DOA-201ENST00000229829 MRPL45Q9BRJ2 306 aaKnown RBP9.64□□□□□ -0.87
HLA-DOA-201ENST00000229829 SPATC1LQ9H0A9 340 aa9.64□□□□□ -0.87
HLA-DOA-201ENST00000229829 WWP1Q9H0M0 922 aa9.64□□□□□ -0.87
HLA-DOA-201ENST00000229829 DHX35Q9H5Z1 703 aaKnown RBP9.64□□□□□ -0.87
HLA-DOA-201ENST00000229829 TRNAU1APQ9NX07 287 aaKnown RBP9.64□□□□□ -0.87
HLA-DOA-201ENST00000229829 PTTG2Q9NZH5 202 aa9.64□□□□□ -0.87
HLA-DOA-201ENST00000229829 TAGLN3Q9UI15 199 aa9.64□□□□□ -0.87
HLA-DOA-201ENST00000229829 EMCNQ9ULC0 261 aa9.64□□□□□ -0.87
HLA-DOA-201ENST00000229829 PSAT1Q9Y617 370 aa9.64□□□□□ -0.87
HLA-DOA-201ENST00000229829 POLR2AP24928 1970 aaKnown RBP9.64□□□□□ -0.87
HLA-DOA-201ENST00000229829 MAGEC1O60732 1142 aa9.63□□□□□ -0.87
HLA-DOA-201ENST00000229829 TRMUO75648 421 aaKnown RBP9.63□□□□□ -0.87
HLA-DOA-201ENST00000229829 TGFB3P10600 412 aa9.63□□□□□ -0.87
HLA-DOA-201ENST00000229829 NCF2P19878 526 aaPredicted RBP9.63□□□□□ -0.87
HLA-DOA-201ENST00000229829 SDC4P31431 198 aa9.63□□□□□ -0.87
HLA-DOA-201ENST00000229829 ARRB2P32121 409 aa9.63□□□□□ -0.87
HLA-DOA-201ENST00000229829 CRHR1P34998 444 aa9.63□□□□□ -0.87
HLA-DOA-201ENST00000229829 HALP42357 657 aa9.63□□□□□ -0.87
HLA-DOA-201ENST00000229829 MAGEA3P43357 314 aa9.63□□□□□ -0.87
HLA-DOA-201ENST00000229829 RPL5P46777 297 aaKnown RBP9.63□□□□□ -0.87
HLA-DOA-201ENST00000229829 KPNA1P52294 538 aaPredicted RBP9.63□□□□□ -0.87
HLA-DOA-201ENST00000229829 OXCT1P55809 520 aa9.63□□□□□ -0.87
HLA-DOA-201ENST00000229829 AMHR2Q16671 573 aa9.63□□□□□ -0.87
HLA-DOA-201ENST00000229829 PPM1JQ5JR12 505 aa9.63□□□□□ -0.87
HLA-DOA-201ENST00000229829 CELF3Q5SZQ8 465 aaKnown RBP9.63□□□□□ -0.87
HLA-DOA-201ENST00000229829 VWA5B1Q5TIE3 1220 aa9.63□□□□□ -0.87
HLA-DOA-201ENST00000229829 BSPRYQ5W0U4 402 aa9.63□□□□□ -0.87
HLA-DOA-201ENST00000229829 CASC4Q6P4E1 433 aa9.63□□□□□ -0.87
HLA-DOA-201ENST00000229829 LCLAT1Q6UWP7 414 aa9.63□□□□□ -0.87
HLA-DOA-201ENST00000229829 DENND5BQ6ZUT9 1274 aa9.63□□□□□ -0.87
HLA-DOA-201ENST00000229829 SLC7A5P1Q8MH63 180 aa9.63□□□□□ -0.87
HLA-DOA-201ENST00000229829 PYROXD2Q8N2H3 581 aa9.63□□□□□ -0.87
HLA-DOA-201ENST00000229829 TMCO5AQ8N6Q1 288 aa9.63□□□□□ -0.87
HLA-DOA-201ENST00000229829 ZFP28Q8NHY6 868 aa9.63□□□□□ -0.87
HLA-DOA-201ENST00000229829 ZMAT2Q96NC0 199 aaKnown RBP9.63□□□□□ -0.87
HLA-DOA-201ENST00000229829 NACA2Q9H009 215 aa9.63□□□□□ -0.87
HLA-DOA-201ENST00000229829 PDZD7Q9H5P4 517 aa9.63□□□□□ -0.87
HLA-DOA-201ENST00000229829 CAAP1Q9H8G2 361 aa9.63□□□□□ -0.87
HLA-DOA-201ENST00000229829 DNAJC16Q9Y2G8 782 aa9.63□□□□□ -0.87
HLA-DOA-201ENST00000229829 TRIM17Q9Y577 477 aa9.63□□□□□ -0.87
HLA-DOA-201ENST00000229829 SDR42E2A6NKP2 422 aa9.63□□□□□ -0.87
HLA-DOA-201ENST00000229829 ALDOAP04075 364 aaKnown RBP9.63□□□□□ -0.87
HLA-DOA-201ENST00000229829 SRGAP2BP0DMP2 458 aa9.63□□□□□ -0.87
HLA-DOA-201ENST00000229829 ARF4P18085 180 aaPredicted RBP9.63□□□□□ -0.87
HLA-DOA-201ENST00000229829 TGM2P21980 687 aa9.63□□□□□ -0.87
HLA-DOA-201ENST00000229829 GK3PQ14409 553 aa9.63□□□□□ -0.87
HLA-DOA-201ENST00000229829 PDK2Q15119 407 aa9.63□□□□□ -0.87
HLA-DOA-201ENST00000229829 TRMT5Q32P41 509 aaKnown RBP9.63□□□□□ -0.87
HLA-DOA-201ENST00000229829 CES3Q6UWW8 571 aa9.63□□□□□ -0.87
HLA-DOA-201ENST00000229829 RIOX2Q8IUF8 465 aa9.63□□□□□ -0.87
HLA-DOA-201ENST00000229829 OXCT2Q9BYC2 517 aaPredicted RBP9.63□□□□□ -0.87
HLA-DOA-201ENST00000229829 XAB2Q9HCS7 855 aaKnown RBP9.63□□□□□ -0.87
HLA-DOA-201ENST00000229829 INIPQ9NRY2 104 aa9.63□□□□□ -0.87
HLA-DOA-201ENST00000229829 ZNF358Q9NW07 568 aa9.63□□□□□ -0.87
HLA-DOA-201ENST00000229829 GGA3Q9NZ52 723 aa9.63□□□□□ -0.87
HLA-DOA-201ENST00000229829 WDR37Q9Y2I8 494 aa9.63□□□□□ -0.87
HLA-DOA-201ENST00000229829 GMEB1Q9Y692 573 aa9.63□□□□□ -0.87
HLA-DOA-201ENST00000229829 A0A088AWK7 358 aa9.63□□□□□ -0.87
HLA-DOA-201ENST00000229829 CARNS1A5YM72 827 aa9.63□□□□□ -0.87
HLA-DOA-201ENST00000229829 TMEM247A6NEH6 219 aa9.63□□□□□ -0.87
HLA-DOA-201ENST00000229829 A8MXQ7 604 aa9.63□□□□□ -0.87
HLA-DOA-201ENST00000229829 RPS12P25398 132 aaKnown RBP9.63□□□□□ -0.87
HLA-DOA-201ENST00000229829 L1CAMP32004 1257 aa9.63□□□□□ -0.87
HLA-DOA-201ENST00000229829 CPOXP36551 454 aa9.63□□□□□ -0.87
HLA-DOA-201ENST00000229829 PHKA2P46019 1235 aa9.63□□□□□ -0.87
HLA-DOA-201ENST00000229829 ACTR3P61158 418 aa9.63□□□□□ -0.87
HLA-DOA-201ENST00000229829 PDE1BQ01064 536 aa9.63□□□□□ -0.87
HLA-DOA-201ENST00000229829 TUBB3Q13509 450 aa9.63□□□□□ -0.87
HLA-DOA-201ENST00000229829 OLIG2Q13516 323 aa9.63□□□□□ -0.87
HLA-DOA-201ENST00000229829 N4BP2L1Q5TBK1 243 aaPredicted RBP9.63□□□□□ -0.87
HLA-DOA-201ENST00000229829 MAVSQ7Z434 540 aa9.63□□□□□ -0.87
HLA-DOA-201ENST00000229829 LZICQ8WZA0 190 aa9.63□□□□□ -0.87
HLA-DOA-201ENST00000229829 SPATA17Q96L03 361 aa9.63□□□□□ -0.87
HLA-DOA-201ENST00000229829 LGMNQ99538 433 aa9.63□□□□□ -0.87
HLA-DOA-201ENST00000229829 CCT7Q99832 543 aa9.63□□□□□ -0.87
HLA-DOA-201ENST00000229829 NT5C1AQ9BXI3 368 aa9.63□□□□□ -0.87
HLA-DOA-201ENST00000229829 TMPRSS4Q9NRS4 437 aa9.63□□□□□ -0.87
HLA-DOA-201ENST00000229829 PNPOQ9NVS9 261 aa9.63□□□□□ -0.87
HLA-DOA-201ENST00000229829 DPP3Q9NY33 737 aa9.63□□□□□ -0.87
HLA-DOA-201ENST00000229829 INPP5FQ9Y2H2 1132 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms