RNA–Protein interactions for RNA: ENST00000229265.10

CDCA3-201, Transcript of cell division cycle associated 3, humanhuman

TSL 2 BASIC

Gene CDCA3, Length 1,047 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-201ENST00000229265 RBL1P28749 1068 aa10.98□□□□□ -0.65
CDCA3-201ENST00000229265 SERPINB6P35237 376 aa10.98□□□□□ -0.65
CDCA3-201ENST00000229265 GEMIN4P57678 1058 aaKnown RBP10.98□□□□□ -0.65
CDCA3-201ENST00000229265 COG7P83436 770 aa10.98□□□□□ -0.65
CDCA3-201ENST00000229265 PDIA2Q13087 525 aaKnown RBP10.98□□□□□ -0.65
CDCA3-201ENST00000229265 MMRN1Q13201 1228 aa10.98□□□□□ -0.65
CDCA3-201ENST00000229265 SEMA5AQ13591 1074 aa10.98□□□□□ -0.65
CDCA3-201ENST00000229265 CBX2Q14781 532 aaPredicted RBP10.98□□□□□ -0.65
CDCA3-201ENST00000229265 PPP6R3Q5H9R7 873 aaPredicted RBP10.98□□□□□ -0.65
CDCA3-201ENST00000229265 RARS2Q5T160 578 aaKnown RBP10.98□□□□□ -0.65
CDCA3-201ENST00000229265 IER5LQ5T953 404 aa10.98□□□□□ -0.65
CDCA3-201ENST00000229265 BSPRYQ5W0U4 402 aa10.98□□□□□ -0.65
CDCA3-201ENST00000229265 ADGRD1Q6QNK2 874 aa10.98□□□□□ -0.65
CDCA3-201ENST00000229265 C3orf62Q6ZUJ4 267 aa10.98□□□□□ -0.65
CDCA3-201ENST00000229265 HFE2Q6ZVN8 426 aa10.98□□□□□ -0.65
CDCA3-201ENST00000229265 YTHDF3Q7Z739 585 aaKnown RBP10.98□□□□□ -0.65
CDCA3-201ENST00000229265 GLIS1Q8NBF1 620 aa10.98□□□□□ -0.65
CDCA3-201ENST00000229265 CLEC4CQ8WTT0 213 aa10.98□□□□□ -0.65
CDCA3-201ENST00000229265 RNF139Q8WU17 664 aa10.98□□□□□ -0.65
CDCA3-201ENST00000229265 HTR3CQ8WXA8 447 aa10.98□□□□□ -0.65
CDCA3-201ENST00000229265 SGSM3Q96HU1 749 aa10.98□□□□□ -0.65
CDCA3-201ENST00000229265 QKIQ96PU8 341 aaKnown RBP eCLIP10.98□□□□□ -0.65
CDCA3-201ENST00000229265 KCTD15Q96SI1 283 aaPredicted RBP10.98□□□□□ -0.65
CDCA3-201ENST00000229265 KCNK16Q96T55 309 aa10.98□□□□□ -0.65
CDCA3-201ENST00000229265 CYTH2Q99418 400 aa10.98□□□□□ -0.65
CDCA3-201ENST00000229265 PHOX2BQ99453 314 aa10.98□□□□□ -0.65
CDCA3-201ENST00000229265 EPAS1Q99814 870 aa10.98□□□□□ -0.65
CDCA3-201ENST00000229265 LPIN3Q9BQK8 851 aa10.98□□□□□ -0.65
CDCA3-201ENST00000229265 WDR6Q9NNW5 1121 aaKnown RBP10.98□□□□□ -0.65
CDCA3-201ENST00000229265 ETNK2Q9NVF9 386 aa10.98□□□□□ -0.65
CDCA3-201ENST00000229265 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP10.98□□□□□ -0.65
CDCA3-201ENST00000229265 SAE1Q9UBE0 346 aaPredicted RBP10.98□□□□□ -0.65
CDCA3-201ENST00000229265 STK39Q9UEW8 545 aa10.98□□□□□ -0.65
CDCA3-201ENST00000229265 XPO7Q9UIA9 1087 aaKnown RBP10.98□□□□□ -0.65
CDCA3-201ENST00000229265 SMG5Q9UPR3 1016 aaKnown RBP10.98□□□□□ -0.65
CDCA3-201ENST00000229265 TEX264Q9Y6I9 313 aa10.98□□□□□ -0.65
CDCA3-201ENST00000229265 USP34Q70CQ2 3546 aa10.97□□□□□ -0.65
CDCA3-201ENST00000229265 FAM92AA1XBS5 289 aa10.97□□□□□ -0.65
CDCA3-201ENST00000229265 YJEFN3A6XGL0 299 aa10.97□□□□□ -0.65
CDCA3-201ENST00000229265 E7ENQ6 273 aa10.97□□□□□ -0.65
CDCA3-201ENST00000229265 TEX28O15482 410 aa10.97□□□□□ -0.65
CDCA3-201ENST00000229265 PRPF4O43172 522 aaKnown RBP eCLIP10.97□□□□□ -0.65
CDCA3-201ENST00000229265 RTN3O95197 1032 aaPredicted RBP10.97□□□□□ -0.65
CDCA3-201ENST00000229265 ACSL3O95573 720 aa10.97□□□□□ -0.65
CDCA3-201ENST00000229265 IGLV3-25P01717 112 aa10.97□□□□□ -0.65
CDCA3-201ENST00000229265 ETS1P14921 441 aa10.97□□□□□ -0.65
CDCA3-201ENST00000229265 BDNFP23560 247 aa10.97□□□□□ -0.65
CDCA3-201ENST00000229265 OR1G1P47890 313 aa10.97□□□□□ -0.65
CDCA3-201ENST00000229265 VPS41P49754 854 aa10.97□□□□□ -0.65
CDCA3-201ENST00000229265 CLCN4P51793 760 aa10.97□□□□□ -0.65
CDCA3-201ENST00000229265 KPNA1P52294 538 aaPredicted RBP10.97□□□□□ -0.65
CDCA3-201ENST00000229265 GDF10P55107 478 aa10.97□□□□□ -0.65
CDCA3-201ENST00000229265 DNAJC3Q13217 504 aa10.97□□□□□ -0.65
CDCA3-201ENST00000229265 DPYSQ14117 519 aa10.97□□□□□ -0.65
CDCA3-201ENST00000229265 FRG1Q14331 258 aaKnown RBP10.97□□□□□ -0.65
CDCA3-201ENST00000229265 CA9Q16790 459 aa10.97□□□□□ -0.65
CDCA3-201ENST00000229265 SYPL2Q5VXT5 272 aa10.97□□□□□ -0.65
CDCA3-201ENST00000229265 NCBP2-AS2Q69YL0 99 aa10.97□□□□□ -0.65
CDCA3-201ENST00000229265 C1orf228Q6PIY5 440 aa10.97□□□□□ -0.65
CDCA3-201ENST00000229265 TMC5Q6UXY8 1006 aa10.97□□□□□ -0.65
CDCA3-201ENST00000229265 BHLHA9Q7RTU4 235 aa10.97□□□□□ -0.65
CDCA3-201ENST00000229265 ZC3H18Q86VM9 953 aaKnown RBP10.97□□□□□ -0.65
CDCA3-201ENST00000229265 GPR65Q8IYL9 337 aa10.97□□□□□ -0.65
CDCA3-201ENST00000229265 ZBED8Q8IZ13 594 aa10.97□□□□□ -0.65
CDCA3-201ENST00000229265 NUP93Q8N1F7 819 aa10.97□□□□□ -0.65
CDCA3-201ENST00000229265 SH2D3CQ8N5H7 860 aa10.97□□□□□ -0.65
CDCA3-201ENST00000229265 SPPL2BQ8TCT7 592 aa10.97□□□□□ -0.65
CDCA3-201ENST00000229265 FATE1Q969F0 183 aa10.97□□□□□ -0.65
CDCA3-201ENST00000229265 MYLPFQ96A32 169 aa10.97□□□□□ -0.65
CDCA3-201ENST00000229265 ZNF707Q96C28 371 aaPredicted RBP10.97□□□□□ -0.65
CDCA3-201ENST00000229265 ACSF2Q96CM8 615 aaPredicted RBP10.97□□□□□ -0.65
CDCA3-201ENST00000229265 GRAMD1AQ96CP6 724 aa10.97□□□□□ -0.65
CDCA3-201ENST00000229265 SPATA17Q96L03 361 aa10.97□□□□□ -0.65
CDCA3-201ENST00000229265 TSGA13Q96PP4 275 aa10.97□□□□□ -0.65
CDCA3-201ENST00000229265 CCT8L2Q96SF2 557 aa10.97□□□□□ -0.65
CDCA3-201ENST00000229265 DHRS4Q9BTZ2 278 aa10.97□□□□□ -0.65
CDCA3-201ENST00000229265 ACSS3Q9H6R3 686 aa10.97□□□□□ -0.65
CDCA3-201ENST00000229265 RAB6BQ9NRW1 208 aa10.97□□□□□ -0.65
CDCA3-201ENST00000229265 OLA1Q9NTK5 396 aaKnown RBP10.97□□□□□ -0.65
CDCA3-201ENST00000229265 INTS9Q9NV88 658 aaKnown RBP10.97□□□□□ -0.65
CDCA3-201ENST00000229265 ARHGEF38Q9NXL2 777 aa10.97□□□□□ -0.65
CDCA3-201ENST00000229265 DTLQ9NZJ0 730 aa10.97□□□□□ -0.65
CDCA3-201ENST00000229265 IGSF9Q9P2J2 1179 aa10.97□□□□□ -0.65
CDCA3-201ENST00000229265 RABGEF1Q9UJ41 708 aa10.97□□□□□ -0.65
CDCA3-201ENST00000229265 ZNF180Q9UJW8 692 aa10.97□□□□□ -0.65
CDCA3-201ENST00000229265 MAFFQ9ULX9 164 aa10.97□□□□□ -0.65
CDCA3-201ENST00000229265 SCML2Q9UQR0 700 aa10.97□□□□□ -0.65
CDCA3-201ENST00000229265 PCDHB5Q9Y5E4 795 aa10.97□□□□□ -0.65
CDCA3-201ENST00000229265 HEY1Q9Y5J3 304 aa10.97□□□□□ -0.65
CDCA3-201ENST00000229265 CLUHO75153 1309 aa10.97□□□□□ -0.65
CDCA3-201ENST00000229265 SCN1AP35498 2009 aa10.96□□□□□ -0.65
CDCA3-201ENST00000229265 ATXN2Q99700 1313 aaKnown RBP10.96□□□□□ -0.65
CDCA3-201ENST00000229265 A0A0A0MRY4 1105 aa10.96□□□□□ -0.65
CDCA3-201ENST00000229265 EXOC1LA0A1B0GW35 172 aa10.96□□□□□ -0.65
CDCA3-201ENST00000229265 WASH4PA8MWX3 477 aa10.96□□□□□ -0.65
CDCA3-201ENST00000229265 EEF2KO00418 725 aaKnown RBP10.96□□□□□ -0.65
CDCA3-201ENST00000229265 DCLK1O15075 740 aa10.96□□□□□ -0.65
CDCA3-201ENST00000229265 FGF10O15520 208 aaPredicted RBP10.96□□□□□ -0.65
CDCA3-201ENST00000229265 HCRTO43612 131 aa10.96□□□□□ -0.65
CDCA3-201ENST00000229265 USP17L7P0C7H9 530 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms