RNA–Protein interactions for RNA: ENST00000228918.8

LTBR-201, Transcript of lymphotoxin beta receptor, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LTBR, Length 2,260 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-201ENST00000228918 APPL2Q8NEU8 664 aa16.68■□□□□ 0.26
LTBR-201ENST00000228918 GATA6Q92908 595 aa16.68■□□□□ 0.26
LTBR-201ENST00000228918 FCRL3Q96P31 734 aaPredicted RBP16.68■□□□□ 0.26
LTBR-201ENST00000228918 DDX43Q9NXZ2 648 aaKnown RBP16.68■□□□□ 0.26
LTBR-201ENST00000228918 CPSF2Q9P2I0 782 aaKnown RBP16.68■□□□□ 0.26
LTBR-201ENST00000228918 SCOCQ9UIL1 159 aa16.68■□□□□ 0.26
LTBR-201ENST00000228918 PPM1HQ9ULR3 514 aa16.68■□□□□ 0.26
LTBR-201ENST00000228918 ZNF236Q9UL36 1845 aa16.68■□□□□ 0.26
LTBR-201ENST00000228918 SYNJ2BP-COX16A0A087WUM0 186 aa16.67■□□□□ 0.26
LTBR-201ENST00000228918 SMIM28A0A1B0GU29 152 aa16.67■□□□□ 0.26
LTBR-201ENST00000228918 DCLK1O15075 740 aa16.67■□□□□ 0.26
LTBR-201ENST00000228918 ADCY6O43306 1168 aa16.67■□□□□ 0.26
LTBR-201ENST00000228918 FKBP6O75344 327 aa16.67■□□□□ 0.26
LTBR-201ENST00000228918 SNAI1O95863 264 aaPredicted RBP16.67■□□□□ 0.26
LTBR-201ENST00000228918 MX2P20592 715 aa16.67■□□□□ 0.26
LTBR-201ENST00000228918 NOS2P35228 1153 aa16.67■□□□□ 0.26
LTBR-201ENST00000228918 TAF6P49848 677 aa16.67■□□□□ 0.26
LTBR-201ENST00000228918 CMC1Q7Z7K0 106 aa16.67■□□□□ 0.26
LTBR-201ENST00000228918 MFN1Q8IWA4 741 aa16.67■□□□□ 0.26
LTBR-201ENST00000228918 TP53INP2Q8IXH6 220 aa16.67■□□□□ 0.26
LTBR-201ENST00000228918 GSTCDQ8NEC7 633 aa16.67■□□□□ 0.26
LTBR-201ENST00000228918 OR6Y1Q8NGX8 325 aa16.67■□□□□ 0.26
LTBR-201ENST00000228918 TNIP3Q96KP6 325 aa16.67■□□□□ 0.26
LTBR-201ENST00000228918 RBBP8Q99708 897 aa16.67■□□□□ 0.26
LTBR-201ENST00000228918 GORASP1Q9BQQ3 440 aa16.67■□□□□ 0.26
LTBR-201ENST00000228918 ZNF358Q9NW07 568 aa16.67■□□□□ 0.26
LTBR-201ENST00000228918 COX16Q9P0S2 106 aa16.67■□□□□ 0.26
LTBR-201ENST00000228918 ADAM28Q9UKQ2 775 aa16.67■□□□□ 0.26
LTBR-201ENST00000228918 ASB3Q9Y575 518 aa16.67■□□□□ 0.26
LTBR-201ENST00000228918 MAP3K13O43283 966 aa16.67■□□□□ 0.26
LTBR-201ENST00000228918 CAPN15O75808 1086 aa16.67■□□□□ 0.26
LTBR-201ENST00000228918 PNPLA4P41247 253 aa16.67■□□□□ 0.26
LTBR-201ENST00000228918 PAPOLAP51003 745 aaKnown RBP16.67■□□□□ 0.26
LTBR-201ENST00000228918 OLIG2Q13516 323 aa16.67■□□□□ 0.26
LTBR-201ENST00000228918 ITGA9Q13797 1035 aa16.67■□□□□ 0.26
LTBR-201ENST00000228918 GSTA3Q16772 222 aa16.67■□□□□ 0.26
LTBR-201ENST00000228918 CCDC153Q494R4 210 aa16.67■□□□□ 0.26
LTBR-201ENST00000228918 CWF19L1Q69YN2 538 aaKnown RBP16.67■□□□□ 0.26
LTBR-201ENST00000228918 PDPK2PQ6A1A2 396 aa16.67■□□□□ 0.26
LTBR-201ENST00000228918 AAGABQ6PD74 315 aa16.67■□□□□ 0.26
LTBR-201ENST00000228918 IZUMO2Q6UXV1 221 aa16.67■□□□□ 0.26
LTBR-201ENST00000228918 RSPH3Q86UC2 560 aa16.67■□□□□ 0.26
LTBR-201ENST00000228918 OSTM1Q86WC4 334 aa16.67■□□□□ 0.26
LTBR-201ENST00000228918 DCLK2Q8N568 766 aa16.67■□□□□ 0.26
LTBR-201ENST00000228918 B3GALNT2Q8NCR0 500 aa16.67■□□□□ 0.26
LTBR-201ENST00000228918 GPRC5AQ8NFJ5 357 aa16.67■□□□□ 0.26
LTBR-201ENST00000228918 OR52K1Q8NGK4 314 aa16.67■□□□□ 0.26
LTBR-201ENST00000228918 IFT43Q96FT9 208 aa16.67■□□□□ 0.26
LTBR-201ENST00000228918 PGLYRP2Q96PD5 576 aa16.67■□□□□ 0.26
LTBR-201ENST00000228918 TTC1Q99614 292 aa16.67■□□□□ 0.26
LTBR-201ENST00000228918 HNRNPABQ99729 332 aaKnown RBP16.67■□□□□ 0.26
LTBR-201ENST00000228918 DUSP16Q9BY84 665 aa16.67■□□□□ 0.26
LTBR-201ENST00000228918 DNAI2Q9GZS0 605 aa16.67■□□□□ 0.26
LTBR-201ENST00000228918 KLK14Q9P0G3 267 aa16.67■□□□□ 0.26
LTBR-201ENST00000228918 STAP1Q9ULZ2 295 aa16.67■□□□□ 0.26
LTBR-201ENST00000228918 MAGEA13PA6NCF6 341 aa16.66■□□□□ 0.26
LTBR-201ENST00000228918 M0QYT0 321 aa16.66■□□□□ 0.26
LTBR-201ENST00000228918 EEF2KO00418 725 aaKnown RBP16.66■□□□□ 0.26
LTBR-201ENST00000228918 CCNT2O60583 730 aaKnown RBP16.66■□□□□ 0.26
LTBR-201ENST00000228918 USP1O94782 785 aa16.66■□□□□ 0.26
LTBR-201ENST00000228918 SMPD1P17405 629 aa16.66■□□□□ 0.26
LTBR-201ENST00000228918 GJA5P36382 358 aa16.66■□□□□ 0.26
LTBR-201ENST00000228918 SERPINB8P50452 374 aa16.66■□□□□ 0.26
LTBR-201ENST00000228918 DSG1Q02413 1049 aa16.66■□□□□ 0.26
LTBR-201ENST00000228918 SOX4Q06945 474 aaPredicted RBP16.66■□□□□ 0.26
LTBR-201ENST00000228918 PID1Q7Z2X4 250 aa16.66■□□□□ 0.26
LTBR-201ENST00000228918 ADGRG6Q86SQ4 1221 aa16.66■□□□□ 0.26
LTBR-201ENST00000228918 ZNF669Q96BR6 464 aaPredicted RBP16.66■□□□□ 0.26
LTBR-201ENST00000228918 LRRC40Q9H9A6 602 aa16.66■□□□□ 0.26
LTBR-201ENST00000228918 GOLGA2P5Q9HBQ8 144 aa16.66■□□□□ 0.26
LTBR-201ENST00000228918 E2F8A0AVK6 867 aa16.66■□□□□ 0.26
LTBR-201ENST00000228918 ARHGAP42A6NI28 874 aa16.66■□□□□ 0.26
LTBR-201ENST00000228918 KCNK1O00180 336 aa16.66■□□□□ 0.26
LTBR-201ENST00000228918 DARSP14868 501 aaKnown RBP16.66■□□□□ 0.26
LTBR-201ENST00000228918 CPA3P15088 417 aa16.66■□□□□ 0.26
LTBR-201ENST00000228918 CRABP2P29373 138 aa16.66■□□□□ 0.26
LTBR-201ENST00000228918 RPS6KA3P51812 740 aa16.66■□□□□ 0.26
LTBR-201ENST00000228918 LIMK2P53671 638 aa16.66■□□□□ 0.26
LTBR-201ENST00000228918 CCNA1P78396 465 aa16.66■□□□□ 0.26
LTBR-201ENST00000228918 DEUP1Q05D60 604 aa16.66■□□□□ 0.26
LTBR-201ENST00000228918 BTKQ06187 659 aa16.66■□□□□ 0.26
LTBR-201ENST00000228918 SV2CQ496J9 727 aa16.66■□□□□ 0.26
LTBR-201ENST00000228918 RALGPS1Q5JS13 557 aa16.66■□□□□ 0.26
LTBR-201ENST00000228918 VWA5B1Q5TIE3 1220 aa16.66■□□□□ 0.26
LTBR-201ENST00000228918 SYPL2Q5VXT5 272 aa16.66■□□□□ 0.26
LTBR-201ENST00000228918 ZNF467Q7Z7K2 595 aaPredicted RBP16.66■□□□□ 0.26
LTBR-201ENST00000228918 OR6J1Q8NGC5 347 aa16.66■□□□□ 0.26
LTBR-201ENST00000228918 SLC2A13Q96QE2 648 aa16.66■□□□□ 0.26
LTBR-201ENST00000228918 TSC22D3Q99576 134 aa16.66■□□□□ 0.26
LTBR-201ENST00000228918 ECSITQ9BQ95 431 aa16.66■□□□□ 0.26
LTBR-201ENST00000228918 PAPOLBQ9NRJ5 636 aaKnown RBP16.66■□□□□ 0.26
LTBR-201ENST00000228918 PIGVQ9NUD9 493 aa16.66■□□□□ 0.26
LTBR-201ENST00000228918 KLHL8Q9P2G9 620 aaPredicted RBP16.66■□□□□ 0.26
LTBR-201ENST00000228918 PCDHB12Q9Y5F1 795 aa16.66■□□□□ 0.26
LTBR-201ENST00000228918 SCN4AP35499 1836 aa16.65■□□□□ 0.26
LTBR-201ENST00000228918 RRN3P2A6NIE6 340 aa16.65■□□□□ 0.26
LTBR-201ENST00000228918 CLDN5O00501 218 aa16.65■□□□□ 0.26
LTBR-201ENST00000228918 HUS1O60921 280 aa16.65■□□□□ 0.26
LTBR-201ENST00000228918 BEST1O76090 585 aa16.65■□□□□ 0.26
LTBR-201ENST00000228918 AP2A1O95782 977 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms