RNA–Protein interactions for RNA: ENST00000223084.7

LSM5-201, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM5, Length 1,295 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-201ENST00000223084 E9PAM4 449 aa13.07□□□□□ -0.32
LSM5-201ENST00000223084 DCLK1O15075 740 aa13.07□□□□□ -0.32
LSM5-201ENST00000223084 TIMM44O43615 452 aa13.07□□□□□ -0.32
LSM5-201ENST00000223084 MFAP3LO75121 409 aa13.07□□□□□ -0.32
LSM5-201ENST00000223084 HLA-EP13747 358 aa13.07□□□□□ -0.32
LSM5-201ENST00000223084 POLR2EP19388 210 aaKnown RBP13.07□□□□□ -0.32
LSM5-201ENST00000223084 CSKP41240 450 aa13.07□□□□□ -0.32
LSM5-201ENST00000223084 CTSOP43234 321 aaPredicted RBP13.07□□□□□ -0.32
LSM5-201ENST00000223084 TBX2Q13207 712 aaPredicted RBP13.07□□□□□ -0.32
LSM5-201ENST00000223084 MTA1Q13330 715 aa13.07□□□□□ -0.32
LSM5-201ENST00000223084 PTPRNQ16849 979 aa13.07□□□□□ -0.32
LSM5-201ENST00000223084 C5orf22Q49AR2 442 aa13.07□□□□□ -0.32
LSM5-201ENST00000223084 FNDC3BQ53EP0 1204 aaKnown RBP13.07□□□□□ -0.32
LSM5-201ENST00000223084 PITRM1Q5JRX3 1037 aa13.07□□□□□ -0.32
LSM5-201ENST00000223084 TTC39BQ5VTQ0 682 aaPredicted RBP13.07□□□□□ -0.32
LSM5-201ENST00000223084 CXorf57Q6NSI4 855 aaKnown RBP13.07□□□□□ -0.32
LSM5-201ENST00000223084 SCYL2Q6P3W7 929 aa13.07□□□□□ -0.32
LSM5-201ENST00000223084 PRR23BQ6ZRT6 265 aa13.07□□□□□ -0.32
LSM5-201ENST00000223084 RASSF3Q86WH2 238 aa13.07□□□□□ -0.32
LSM5-201ENST00000223084 ZNF366Q8N895 744 aa13.07□□□□□ -0.32
LSM5-201ENST00000223084 SUMF1Q8NBK3 374 aa13.07□□□□□ -0.32
LSM5-201ENST00000223084 C1orf74Q96LT6 269 aa13.07□□□□□ -0.32
LSM5-201ENST00000223084 HAPLN3Q96S86 360 aa13.07□□□□□ -0.32
LSM5-201ENST00000223084 CNPY3Q9BT09 278 aa13.07□□□□□ -0.32
LSM5-201ENST00000223084 THAP2Q9H0W7 228 aa13.07□□□□□ -0.32
LSM5-201ENST00000223084 SLC6A17Q9H1V8 727 aa13.07□□□□□ -0.32
LSM5-201ENST00000223084 CD248Q9HCU0 757 aa13.07□□□□□ -0.32
LSM5-201ENST00000223084 KIAA1522Q9P206 1035 aaPredicted RBP13.07□□□□□ -0.32
LSM5-201ENST00000223084 BCCIPQ9P287 314 aaKnown RBP eCLIP13.07□□□□□ -0.32
LSM5-201ENST00000223084 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.06□□□□□ -0.32
LSM5-201ENST00000223084 CCDC163A0A0D9SF12 145 aa13.06□□□□□ -0.32
LSM5-201ENST00000223084 TMEM191CA6NGB0 347 aa13.06□□□□□ -0.32
LSM5-201ENST00000223084 DRGXA6NNA5 263 aa13.06□□□□□ -0.32
LSM5-201ENST00000223084 FAM72CH0Y354 149 aa13.06□□□□□ -0.32
LSM5-201ENST00000223084 GFRA3O60609 400 aa13.06□□□□□ -0.32
LSM5-201ENST00000223084 ALDH1A2O94788 518 aa13.06□□□□□ -0.32
LSM5-201ENST00000223084 LMNAP02545 664 aaKnown RBP13.06□□□□□ -0.32
LSM5-201ENST00000223084 TPM1P09493 284 aa13.06□□□□□ -0.32
LSM5-201ENST00000223084 DLDP09622 509 aaKnown RBP13.06□□□□□ -0.32
LSM5-201ENST00000223084 GABRG2P18507 467 aa13.06□□□□□ -0.32
LSM5-201ENST00000223084 PSMA2P25787 234 aa13.06□□□□□ -0.32
LSM5-201ENST00000223084 ZNF75DP51815 510 aa13.06□□□□□ -0.32
LSM5-201ENST00000223084 GFPT1Q06210 699 aaPredicted RBP13.06□□□□□ -0.32
LSM5-201ENST00000223084 ZNF252P-AS1Q0IIN9 211 aa13.06□□□□□ -0.32
LSM5-201ENST00000223084 ZNF177Q13360 481 aaPredicted RBP13.06□□□□□ -0.32
LSM5-201ENST00000223084 ENPP2Q13822 863 aa13.06□□□□□ -0.32
LSM5-201ENST00000223084 SIM2Q14190 667 aaPredicted RBP13.06□□□□□ -0.32
LSM5-201ENST00000223084 ARID5BQ14865 1188 aa13.06□□□□□ -0.32
LSM5-201ENST00000223084 PLEKHG6Q3KR16 790 aa13.06□□□□□ -0.32
LSM5-201ENST00000223084 CCDC122Q5T0U0 273 aa13.06□□□□□ -0.32
LSM5-201ENST00000223084 FAM72AQ5TYM5 149 aa13.06□□□□□ -0.32
LSM5-201ENST00000223084 FAM72DQ6L9T8 149 aa13.06□□□□□ -0.32
LSM5-201ENST00000223084 ALKBH5Q6P6C2 394 aaKnown RBP13.06□□□□□ -0.32
LSM5-201ENST00000223084 SERPINA13PQ6UXR4 307 aa13.06□□□□□ -0.32
LSM5-201ENST00000223084 LRRC31Q6UY01 552 aa13.06□□□□□ -0.32
LSM5-201ENST00000223084 CEP68Q76N32 757 aa13.06□□□□□ -0.32
LSM5-201ENST00000223084 TFAP2DQ7Z6R9 452 aa13.06□□□□□ -0.32
LSM5-201ENST00000223084 FAM72BQ86X60 149 aa13.06□□□□□ -0.32
LSM5-201ENST00000223084 DRC7Q8IY82 874 aa13.06□□□□□ -0.32
LSM5-201ENST00000223084 PYROXD2Q8N2H3 581 aa13.06□□□□□ -0.32
LSM5-201ENST00000223084 PGBD3Q8N328 593 aa13.06□□□□□ -0.32
LSM5-201ENST00000223084 ZNF557Q8N988 423 aaPredicted RBP13.06□□□□□ -0.32
LSM5-201ENST00000223084 GAB3Q8WWW8 586 aa13.06□□□□□ -0.32
LSM5-201ENST00000223084 RLN3Q8WXF3 142 aa13.06□□□□□ -0.32
LSM5-201ENST00000223084 TTC17Q96AE7 1141 aa13.06□□□□□ -0.32
LSM5-201ENST00000223084 CHP1Q99653 195 aa13.06□□□□□ -0.32
LSM5-201ENST00000223084 EPC1Q9H2F5 836 aa13.06□□□□□ -0.32
LSM5-201ENST00000223084 SEMA4AQ9H3S1 761 aa13.06□□□□□ -0.32
LSM5-201ENST00000223084 MTG2Q9H4K7 406 aa13.06□□□□□ -0.32
LSM5-201ENST00000223084 ABHD10Q9NUJ1 306 aa13.06□□□□□ -0.32
LSM5-201ENST00000223084 TMEM51Q9NW97 253 aa13.06□□□□□ -0.32
LSM5-201ENST00000223084 NENFQ9UMX5 172 aa13.06□□□□□ -0.32
LSM5-201ENST00000223084 PLA2G4CQ9UP65 541 aa13.06□□□□□ -0.32
LSM5-201ENST00000223084 SMG5Q9UPR3 1016 aaKnown RBP13.06□□□□□ -0.32
LSM5-201ENST00000223084 SSUH2Q9Y2M2 353 aa13.06□□□□□ -0.32
LSM5-201ENST00000223084 GON4LQ3T8J9 2241 aa13.06□□□□□ -0.32
LSM5-201ENST00000223084 CKAP5Q14008 2032 aa13.06□□□□□ -0.32
LSM5-201ENST00000223084 OTOGLQ3ZCN5 2332 aa13.06□□□□□ -0.32
LSM5-201ENST00000223084 IGLV3-10A0A075B6K4 115 aa13.05□□□□□ -0.32
LSM5-201ENST00000223084 AKR1B15C9JRZ8 316 aaPredicted RBP13.05□□□□□ -0.32
LSM5-201ENST00000223084 NPC1O15118 1278 aa13.05□□□□□ -0.32
LSM5-201ENST00000223084 CLDN11O75508 207 aa13.05□□□□□ -0.32
LSM5-201ENST00000223084 RPP40O75818 363 aaKnown RBP13.05□□□□□ -0.32
LSM5-201ENST00000223084 ATP5BP06576 529 aaKnown RBP13.05□□□□□ -0.32
LSM5-201ENST00000223084 EPHX1P07099 455 aa13.05□□□□□ -0.32
LSM5-201ENST00000223084 MYBL1P10243 752 aa13.05□□□□□ -0.32
LSM5-201ENST00000223084 NDUFV2P19404 249 aa13.05□□□□□ -0.32
LSM5-201ENST00000223084 CNR2P34972 360 aa13.05□□□□□ -0.32
LSM5-201ENST00000223084 CDH4P55283 916 aa13.05□□□□□ -0.32
LSM5-201ENST00000223084 TSR1Q2NL82 804 aaKnown RBP13.05□□□□□ -0.32
LSM5-201ENST00000223084 ARL13BQ3SXY8 428 aa13.05□□□□□ -0.32
LSM5-201ENST00000223084 RNF219Q5W0B1 726 aaPredicted RBP13.05□□□□□ -0.32
LSM5-201ENST00000223084 SLFN11Q7Z7L1 901 aa13.05□□□□□ -0.32
LSM5-201ENST00000223084 ARFGAP1Q8N6T3 406 aa13.05□□□□□ -0.32
LSM5-201ENST00000223084 FRMD1Q8N878 549 aa13.05□□□□□ -0.32
LSM5-201ENST00000223084 ARHGEF26Q96DR7 871 aa13.05□□□□□ -0.32
LSM5-201ENST00000223084 TRIM11Q96F44 468 aa13.05□□□□□ -0.32
LSM5-201ENST00000223084 MYO19Q96H55 970 aa13.05□□□□□ -0.32
LSM5-201ENST00000223084 RPL10LQ96L21 214 aaKnown RBP13.05□□□□□ -0.32
LSM5-201ENST00000223084 MRGPRX3Q96LB0 322 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms