RNA–Protein interactions for RNA: ENST00000219281.7

USB1-201, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USB1, Length 2,282 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-201ENST00000219281 LMO2P25791 158 aa17.7■□□□□ 0.42
USB1-201ENST00000219281 HARS2P49590 506 aaKnown RBP17.7■□□□□ 0.42
USB1-201ENST00000219281 GTF2A2P52657 109 aa17.7■□□□□ 0.42
USB1-201ENST00000219281 USP4Q13107 963 aa17.7■□□□□ 0.42
USB1-201ENST00000219281 CUL3Q13618 768 aa17.7■□□□□ 0.42
USB1-201ENST00000219281 SFT2D3Q587I9 215 aa17.7■□□□□ 0.42
USB1-201ENST00000219281 MTHFD1LQ6UB35 978 aa17.7■□□□□ 0.42
USB1-201ENST00000219281 MFN1Q8IWA4 741 aa17.7■□□□□ 0.42
USB1-201ENST00000219281 DEFB107AQ8IZN7 70 aa17.7■□□□□ 0.42
USB1-201ENST00000219281 CMTM5Q96DZ9 223 aa17.7■□□□□ 0.42
USB1-201ENST00000219281 PTPN18Q99952 460 aa17.7■□□□□ 0.42
USB1-201ENST00000219281 SNX15Q9NRS6 342 aa17.7■□□□□ 0.42
USB1-201ENST00000219281 COX16Q9P0S2 106 aa17.7■□□□□ 0.42
USB1-201ENST00000219281 ADAMTS6Q9UKP5 1117 aa17.7■□□□□ 0.42
USB1-201ENST00000219281 UNCXA6NJT0 531 aa17.69■□□□□ 0.42
USB1-201ENST00000219281 DCXO43602 365 aa17.69■□□□□ 0.42
USB1-201ENST00000219281 STRNO43815 780 aa17.69■□□□□ 0.42
USB1-201ENST00000219281 MYCNP04198 464 aaPredicted RBP17.69■□□□□ 0.42
USB1-201ENST00000219281 POLBP06746 335 aa17.69■□□□□ 0.42
USB1-201ENST00000219281 MX2P20592 715 aa17.69■□□□□ 0.42
USB1-201ENST00000219281 GP5P40197 560 aa17.69■□□□□ 0.42
USB1-201ENST00000219281 GARSP41250 739 aaKnown RBP17.69■□□□□ 0.42
USB1-201ENST00000219281 SULT1E1P49888 294 aa17.69■□□□□ 0.42
USB1-201ENST00000219281 BCAT1P54687 386 aa17.69■□□□□ 0.42
USB1-201ENST00000219281 DEUP1Q05D60 604 aa17.69■□□□□ 0.42
USB1-201ENST00000219281 FRMD7Q6ZUT3 714 aa17.69■□□□□ 0.42
USB1-201ENST00000219281 UNC93AQ86WB7 457 aa17.69■□□□□ 0.42
USB1-201ENST00000219281 HPS6Q86YV9 775 aa17.69■□□□□ 0.42
USB1-201ENST00000219281 DEFB106AQ8N104 65 aa17.69■□□□□ 0.42
USB1-201ENST00000219281 ZNF567Q8N184 647 aa17.69■□□□□ 0.42
USB1-201ENST00000219281 NME8Q8N427 588 aa17.69■□□□□ 0.42
USB1-201ENST00000219281 DCLK2Q8N568 766 aa17.69■□□□□ 0.42
USB1-201ENST00000219281 EMID1Q96A84 441 aaPredicted RBP17.69■□□□□ 0.42
USB1-201ENST00000219281 CERS2Q96G23 380 aa17.69■□□□□ 0.42
USB1-201ENST00000219281 FCRL3Q96P31 734 aaPredicted RBP17.69■□□□□ 0.42
USB1-201ENST00000219281 FAM192AQ9GZU8 254 aa17.69■□□□□ 0.42
USB1-201ENST00000219281 SCN1AP35498 2009 aa17.69■□□□□ 0.42
USB1-201ENST00000219281 CREB3O43889 395 aa17.69■□□□□ 0.42
USB1-201ENST00000219281 MYL4P12829 197 aa17.69■□□□□ 0.42
USB1-201ENST00000219281 BTKQ06187 659 aa17.69■□□□□ 0.42
USB1-201ENST00000219281 HNRNPDQ14103 355 aaKnown RBP17.69■□□□□ 0.42
USB1-201ENST00000219281 CFAP157Q5JU67 520 aa17.69■□□□□ 0.42
USB1-201ENST00000219281 TCHHL1Q5QJ38 904 aaPredicted RBP17.69■□□□□ 0.42
USB1-201ENST00000219281 GRTP1Q5TC63 336 aa17.69■□□□□ 0.42
USB1-201ENST00000219281 STRADAQ7RTN6 431 aa17.69■□□□□ 0.42
USB1-201ENST00000219281 PLD6Q8N2A8 252 aaKnown RBP17.69■□□□□ 0.42
USB1-201ENST00000219281 NAT9Q9BTE0 207 aa17.69■□□□□ 0.42
USB1-201ENST00000219281 TRIM4Q9C037 500 aa17.69■□□□□ 0.42
USB1-201ENST00000219281 MAN1C1Q9NR34 630 aa17.69■□□□□ 0.42
USB1-201ENST00000219281 HES2Q9Y543 173 aa17.69■□□□□ 0.42
USB1-201ENST00000219281 SCN4AP35499 1836 aa17.69■□□□□ 0.42
USB1-201ENST00000219281 SERPINB6P35237 376 aa17.68■□□□□ 0.42
USB1-201ENST00000219281 GLUD2P49448 558 aa17.68■□□□□ 0.42
USB1-201ENST00000219281 PITX1P78337 314 aaPredicted RBP17.68■□□□□ 0.42
USB1-201ENST00000219281 IFRD2Q12894 506 aaPredicted RBP17.68■□□□□ 0.42
USB1-201ENST00000219281 GPR162Q16538 588 aa17.68■□□□□ 0.42
USB1-201ENST00000219281 CCDC153Q494R4 210 aa17.68■□□□□ 0.42
USB1-201ENST00000219281 GPR142Q7Z601 462 aa17.68■□□□□ 0.42
USB1-201ENST00000219281 ZNF467Q7Z7K2 595 aaPredicted RBP17.68■□□□□ 0.42
USB1-201ENST00000219281 ANKRD23Q86SG2 305 aa17.68■□□□□ 0.42
USB1-201ENST00000219281 TP53INP2Q8IXH6 220 aa17.68■□□□□ 0.42
USB1-201ENST00000219281 ZNF781Q8N8C0 355 aa17.68■□□□□ 0.42
USB1-201ENST00000219281 GDPD5Q8WTR4 605 aa17.68■□□□□ 0.42
USB1-201ENST00000219281 AZIN2Q96A70 460 aa17.68■□□□□ 0.42
USB1-201ENST00000219281 FAM149B1Q96BN6 582 aa17.68■□□□□ 0.42
USB1-201ENST00000219281 CPNE1Q99829 537 aa17.68■□□□□ 0.42
USB1-201ENST00000219281 PRDM12Q9H4Q4 367 aa17.68■□□□□ 0.42
USB1-201ENST00000219281 COG4Q9H9E3 785 aa17.68■□□□□ 0.42
USB1-201ENST00000219281 POMPQ9Y244 141 aa17.68■□□□□ 0.42
USB1-201ENST00000219281 GINS2Q9Y248 185 aa17.68■□□□□ 0.42
USB1-201ENST00000219281 E9PBE3 544 aa17.68■□□□□ 0.42
USB1-201ENST00000219281 H3BRB1 525 aa17.68■□□□□ 0.42
USB1-201ENST00000219281 KLHL41O60662 606 aa17.68■□□□□ 0.42
USB1-201ENST00000219281 COX4I1P13073 169 aa17.68■□□□□ 0.42
USB1-201ENST00000219281 SMPD1P17405 629 aa17.68■□□□□ 0.42
USB1-201ENST00000219281 SCNN1AP37088 669 aa17.68■□□□□ 0.42
USB1-201ENST00000219281 MATKP42679 507 aa17.68■□□□□ 0.42
USB1-201ENST00000219281 TBL3Q12788 808 aaKnown RBP17.68■□□□□ 0.42
USB1-201ENST00000219281 PID1Q7Z2X4 250 aa17.68■□□□□ 0.42
USB1-201ENST00000219281 BEST2Q8NFU1 509 aa17.68■□□□□ 0.42
USB1-201ENST00000219281 OR52K1Q8NGK4 314 aa17.68■□□□□ 0.42
USB1-201ENST00000219281 SLC2A14Q8TDB8 520 aa17.68■□□□□ 0.42
USB1-201ENST00000219281 RNF139Q8WU17 664 aa17.68■□□□□ 0.42
USB1-201ENST00000219281 AGAP3Q96P47 875 aa17.68■□□□□ 0.42
USB1-201ENST00000219281 FERMT1Q9BQL6 677 aa17.68■□□□□ 0.42
USB1-201ENST00000219281 KLHL4Q9C0H6 718 aa17.68■□□□□ 0.42
USB1-201ENST00000219281 TUT1Q9H6E5 874 aaKnown RBP17.68■□□□□ 0.42
USB1-201ENST00000219281 ZDHHC7Q9NXF8 308 aa17.68■□□□□ 0.42
USB1-201ENST00000219281 PLXNA1Q9UIW2 1896 aa17.68■□□□□ 0.42
USB1-201ENST00000219281 ZBTB14O43829 449 aa17.67■□□□□ 0.42
USB1-201ENST00000219281 USP12O75317 370 aa17.67■□□□□ 0.42
USB1-201ENST00000219281 HSPA4LO95757 839 aa17.67■□□□□ 0.42
USB1-201ENST00000219281 PEX2P28328 305 aa17.67■□□□□ 0.42
USB1-201ENST00000219281 GNL1P36915 607 aaPredicted RBP17.67■□□□□ 0.42
USB1-201ENST00000219281 ABCG1P45844 678 aa17.67■□□□□ 0.42
USB1-201ENST00000219281 MSLNQ13421 630 aaPredicted RBP17.67■□□□□ 0.42
USB1-201ENST00000219281 SLC9B1Q4ZJI4 515 aa17.67■□□□□ 0.42
USB1-201ENST00000219281 SPANXN3Q5MJ09 141 aa17.67■□□□□ 0.42
USB1-201ENST00000219281 MARCH8Q5T0T0 291 aa17.67■□□□□ 0.42
USB1-201ENST00000219281 ZNF618Q5T7W0 954 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms