RNA–Protein interactions for RNA: ENST00000219084.10

CHD9-201, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 1 (best)

Gene CHD9, Length 8,739 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-201ENST00000219084 SERHL2Q9H4I8 314 aa4.5□□□□□ -1.69
CHD9-201ENST00000219084 SERHLQ9NQF3 203 aa4.5□□□□□ -1.69
CHD9-201ENST00000219084 ATP6V1HQ9UI12 483 aa4.5□□□□□ -1.69
CHD9-201ENST00000219084 DMGDHQ9UI17 866 aaKnown RBP4.5□□□□□ -1.69
CHD9-201ENST00000219084 PHF11Q9UIL8 331 aa4.5□□□□□ -1.69
CHD9-201ENST00000219084 DERAQ9Y315 318 aa4.5□□□□□ -1.69
CHD9-201ENST00000219084 BCL9O00512 1426 aa4.5□□□□□ -1.69
CHD9-201ENST00000219084 COL1A2P08123 1366 aa4.5□□□□□ -1.69
CHD9-201ENST00000219084 PHLPP1O60346 1717 aa4.5□□□□□ -1.69
CHD9-201ENST00000219084 MYO5AQ9Y4I1 1855 aaKnown RBP4.5□□□□□ -1.69
CHD9-201ENST00000219084 C17orf102A2RUQ5 167 aa4.5□□□□□ -1.69
CHD9-201ENST00000219084 NR5A2O00482 541 aa4.5□□□□□ -1.69
CHD9-201ENST00000219084 FGRP09769 529 aa4.5□□□□□ -1.69
CHD9-201ENST00000219084 BGNP21810 368 aa4.5□□□□□ -1.69
CHD9-201ENST00000219084 PTX3P26022 381 aaPredicted RBP4.5□□□□□ -1.69
CHD9-201ENST00000219084 GABRB2P47870 512 aa4.5□□□□□ -1.69
CHD9-201ENST00000219084 ZNF143P52747 638 aaPredicted RBP4.5□□□□□ -1.69
CHD9-201ENST00000219084 PSMC6P62333 389 aa4.5□□□□□ -1.69
CHD9-201ENST00000219084 AMPD2Q01433 879 aa4.5□□□□□ -1.69
CHD9-201ENST00000219084 CYP4A22Q5TCH4 519 aa4.5□□□□□ -1.69
CHD9-201ENST00000219084 BHLHB9Q6PI77 547 aa4.5□□□□□ -1.69
CHD9-201ENST00000219084 TMEM126BQ8IUX1 230 aa4.5□□□□□ -1.69
CHD9-201ENST00000219084 DHRSXQ8N5I4 330 aa4.5□□□□□ -1.69
CHD9-201ENST00000219084 DPP10Q8N608 796 aa4.5□□□□□ -1.69
CHD9-201ENST00000219084 RTL3Q8N8U3 475 aaKnown RBP4.5□□□□□ -1.69
CHD9-201ENST00000219084 DGCR14Q96DF8 476 aaKnown RBP4.5□□□□□ -1.69
CHD9-201ENST00000219084 UROC1Q96N76 676 aa4.5□□□□□ -1.69
CHD9-201ENST00000219084 BTBD9Q96Q07 612 aa4.5□□□□□ -1.69
CHD9-201ENST00000219084 MTMR9Q96QG7 549 aa4.5□□□□□ -1.69
CHD9-201ENST00000219084 HOPXQ9BPY8 73 aaPredicted RBP4.5□□□□□ -1.69
CHD9-201ENST00000219084 TMEM121Q9BTD3 319 aa4.5□□□□□ -1.69
CHD9-201ENST00000219084 OXCT2Q9BYC2 517 aaPredicted RBP4.5□□□□□ -1.69
CHD9-201ENST00000219084 ELOVL4Q9GZR5 314 aa4.5□□□□□ -1.69
CHD9-201ENST00000219084 KLHL25Q9H0H3 589 aa4.5□□□□□ -1.69
CHD9-201ENST00000219084 KCNMB3Q9NPA1 279 aa4.5□□□□□ -1.69
CHD9-201ENST00000219084 TLR8Q9NR97 1041 aaKnown RBP4.5□□□□□ -1.69
CHD9-201ENST00000219084 DNAJC28Q9NX36 388 aa4.5□□□□□ -1.69
CHD9-201ENST00000219084 ZNF180Q9UJW8 692 aa4.5□□□□□ -1.69
CHD9-201ENST00000219084 SH3BP1Q9Y3L3 701 aa4.5□□□□□ -1.69
CHD9-201ENST00000219084 MTF2Q9Y483 593 aaPredicted RBP4.5□□□□□ -1.69
CHD9-201ENST00000219084 AK5Q9Y6K8 562 aa4.5□□□□□ -1.69
CHD9-201ENST00000219084 MGAT4DA6NG13 374 aa4.5□□□□□ -1.69
CHD9-201ENST00000219084 UQCRBP14927 111 aa4.5□□□□□ -1.69
CHD9-201ENST00000219084 RRM1P23921 792 aa4.5□□□□□ -1.69
CHD9-201ENST00000219084 KCNJ1P48048 391 aa4.5□□□□□ -1.69
CHD9-201ENST00000219084 CLCN5P51795 746 aa4.5□□□□□ -1.69
CHD9-201ENST00000219084 SPIRE1Q08AE8 756 aa4.5□□□□□ -1.69
CHD9-201ENST00000219084 ZNF846Q147U1 533 aa4.5□□□□□ -1.69
CHD9-201ENST00000219084 CCDC85BQ15834 202 aaPredicted RBP4.5□□□□□ -1.69
CHD9-201ENST00000219084 PHKG1Q16816 387 aa4.5□□□□□ -1.69
CHD9-201ENST00000219084 Q3C1V9 767 aa4.5□□□□□ -1.69
CHD9-201ENST00000219084 TTMPQ5BVD1 217 aa4.5□□□□□ -1.69
CHD9-201ENST00000219084 ANGEL2Q5VTE6 544 aaKnown RBP4.5□□□□□ -1.69
CHD9-201ENST00000219084 LIPMQ5VYY2 423 aa4.5□□□□□ -1.69
CHD9-201ENST00000219084 METTL21CQ5VZV1 264 aa4.5□□□□□ -1.69
CHD9-201ENST00000219084 DUPD1Q68J44 220 aa4.5□□□□□ -1.69
CHD9-201ENST00000219084 IL31Q6EBC2 164 aa4.5□□□□□ -1.69
CHD9-201ENST00000219084 METTL7BQ6UX53 244 aa4.5□□□□□ -1.69
CHD9-201ENST00000219084 ATL1Q8WXF7 558 aa4.5□□□□□ -1.69
CHD9-201ENST00000219084 BORCS5Q969J3 196 aa4.5□□□□□ -1.69
CHD9-201ENST00000219084 RTFDC1Q9BY42 306 aaPredicted RBP4.5□□□□□ -1.69
CHD9-201ENST00000219084 PLK2Q9NYY3 685 aa4.5□□□□□ -1.69
CHD9-201ENST00000219084 NINJ2Q9NZG7 142 aa4.5□□□□□ -1.69
CHD9-201ENST00000219084 GSTK1Q9Y2Q3 226 aa4.5□□□□□ -1.69
CHD9-201ENST00000219084 DYRK1BQ9Y463 629 aa4.5□□□□□ -1.69
CHD9-201ENST00000219084 SPATA31A5Q5VU36 1347 aa4.5□□□□□ -1.69
CHD9-201ENST00000219084 SPATA31A7Q8IWB4 1347 aa4.5□□□□□ -1.69
CHD9-201ENST00000219084 M0QYT0 321 aa4.5□□□□□ -1.69
CHD9-201ENST00000219084 STAG3L1P0CL83 205 aa4.5□□□□□ -1.69
CHD9-201ENST00000219084 EPHB2P29323 1055 aa4.5□□□□□ -1.69
CHD9-201ENST00000219084 PPP3CCP48454 512 aa4.5□□□□□ -1.69
CHD9-201ENST00000219084 SNAP25P60880 206 aa4.5□□□□□ -1.69
CHD9-201ENST00000219084 BAATQ14032 418 aaPredicted RBP4.5□□□□□ -1.69
CHD9-201ENST00000219084 ZRANB3Q5FWF4 1079 aa4.5□□□□□ -1.69
CHD9-201ENST00000219084 GALNT18Q6P9A2 607 aa4.5□□□□□ -1.69
CHD9-201ENST00000219084 ZNF549Q6P9A3 640 aa4.5□□□□□ -1.69
CHD9-201ENST00000219084 RFX8Q6ZV50 586 aa4.5□□□□□ -1.69
CHD9-201ENST00000219084 CCDC80Q76M96 950 aa4.5□□□□□ -1.69
CHD9-201ENST00000219084 BRSK2Q8IWQ3 736 aa4.5□□□□□ -1.69
CHD9-201ENST00000219084 NKAPQ8N5F7 415 aaKnown RBP4.5□□□□□ -1.69
CHD9-201ENST00000219084 FAM81AQ8TBF8 368 aa4.5□□□□□ -1.69
CHD9-201ENST00000219084 SLC35C1Q96A29 364 aa4.5□□□□□ -1.69
CHD9-201ENST00000219084 OTULINQ96BN8 352 aa4.5□□□□□ -1.69
CHD9-201ENST00000219084 ZFYVE19Q96K21 471 aa4.5□□□□□ -1.69
CHD9-201ENST00000219084 RPRD1AQ96P16 312 aaPredicted RBP4.5□□□□□ -1.69
CHD9-201ENST00000219084 GORASP1Q9BQQ3 440 aa4.5□□□□□ -1.69
CHD9-201ENST00000219084 COLEC11Q9BWP8 271 aa4.5□□□□□ -1.69
CHD9-201ENST00000219084 SEMA4AQ9H3S1 761 aa4.5□□□□□ -1.69
CHD9-201ENST00000219084 LNPEPQ9UIQ6 1025 aa4.5□□□□□ -1.69
CHD9-201ENST00000219084 ANAPC2Q9UJX6 822 aa4.5□□□□□ -1.69
CHD9-201ENST00000219084 DUSP10Q9Y6W6 482 aa4.5□□□□□ -1.69
CHD9-201ENST00000219084 A0A087WZ62 844 aa4.5□□□□□ -1.69
CHD9-201ENST00000219084 ZBTB39O15060 712 aa4.5□□□□□ -1.69
CHD9-201ENST00000219084 ZW10O43264 779 aa4.5□□□□□ -1.69
CHD9-201ENST00000219084 MPZL2O60487 215 aa4.5□□□□□ -1.69
CHD9-201ENST00000219084 MTA2O94776 668 aa4.5□□□□□ -1.69
CHD9-201ENST00000219084 SUPT7LO94864 414 aa4.5□□□□□ -1.69
CHD9-201ENST00000219084 SERPINF2P08697 491 aa4.5□□□□□ -1.69
CHD9-201ENST00000219084 TCF3P15923 654 aa4.5□□□□□ -1.69
CHD9-201ENST00000219084 NFKB1P19838 968 aa4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms