RNA–Protein interactions for RNA: ENST00000216456.6

VTI1B-201, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 1 (best)

Gene VTI1B, Length 1,103 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-201ENST00000216456 IRX2Q9BZI1 471 aaPredicted RBP22.87■■□□□ 1.25
VTI1B-201ENST00000216456 BTBD1Q9H0C5 482 aa22.87■■□□□ 1.25
VTI1B-201ENST00000216456 GAREM1Q9H706 876 aa22.87■■□□□ 1.25
VTI1B-201ENST00000216456 ANLNQ9NQW6 1124 aa22.87■■□□□ 1.25
VTI1B-201ENST00000216456 SAMSN1Q9NSI8 373 aaKnown RBP22.87■■□□□ 1.25
VTI1B-201ENST00000216456 NFE2L3Q9Y4A8 694 aa22.87■■□□□ 1.25
VTI1B-201ENST00000216456 SNX10Q9Y5X0 201 aa22.87■■□□□ 1.25
VTI1B-201ENST00000216456 FHOD1Q9Y613 1164 aa22.87■■□□□ 1.25
VTI1B-201ENST00000216456 PRKCSHP14314 528 aaPredicted RBP22.86■■□□□ 1.25
VTI1B-201ENST00000216456 METAP1P53582 386 aa22.86■■□□□ 1.25
VTI1B-201ENST00000216456 ST8SIA6P61647 398 aa22.86■■□□□ 1.25
VTI1B-201ENST00000216456 CDK17Q00537 523 aa22.86■■□□□ 1.25
VTI1B-201ENST00000216456 HLA-BQ31612 363 aa22.86■■□□□ 1.25
VTI1B-201ENST00000216456 VWA3BQ502W6 1294 aa22.86■■□□□ 1.25
VTI1B-201ENST00000216456 C2CD6Q53TS8 623 aa22.86■■□□□ 1.25
VTI1B-201ENST00000216456 FBXL22Q6P050 247 aa22.86■■□□□ 1.25
VTI1B-201ENST00000216456 NAXDQ8IW45 347 aa22.86■■□□□ 1.25
VTI1B-201ENST00000216456 CCAR2Q8N163 923 aaKnown RBP22.86■■□□□ 1.25
VTI1B-201ENST00000216456 PNPLA1Q8N8W4 532 aa22.86■■□□□ 1.25
VTI1B-201ENST00000216456 GANCQ8TET4 914 aa22.86■■□□□ 1.25
VTI1B-201ENST00000216456 ORAI3Q9BRQ5 295 aa22.86■■□□□ 1.25
VTI1B-201ENST00000216456 TUBGCP2Q9BSJ2 902 aa22.86■■□□□ 1.25
VTI1B-201ENST00000216456 PABPC3Q9H361 631 aaKnown RBP22.86■■□□□ 1.25
VTI1B-201ENST00000216456 NDST4Q9H3R1 872 aa22.86■■□□□ 1.25
VTI1B-201ENST00000216456 CEP83Q9Y592 693 aa22.86■■□□□ 1.25
VTI1B-201ENST00000216456 A0A1W2PP55 124 aa22.85■■□□□ 1.25
VTI1B-201ENST00000216456 F5H5T6 163 aa22.85■■□□□ 1.25
VTI1B-201ENST00000216456 I6L893 689 aaPredicted RBP22.85■■□□□ 1.25
VTI1B-201ENST00000216456 ECT2LQ008S8 904 aa22.85■■□□□ 1.25
VTI1B-201ENST00000216456 PTK2Q05397 1052 aa22.85■■□□□ 1.25
VTI1B-201ENST00000216456 KIF19Q2TAC6 998 aa22.85■■□□□ 1.25
VTI1B-201ENST00000216456 CXorf57Q6NSI4 855 aaKnown RBP22.85■■□□□ 1.25
VTI1B-201ENST00000216456 C11orf57Q6ZUT1 292 aaPredicted RBP22.85■■□□□ 1.25
VTI1B-201ENST00000216456 STK40Q8N2I9 435 aa22.85■■□□□ 1.25
VTI1B-201ENST00000216456 ATP6V0D2Q8N8Y2 350 aa22.85■■□□□ 1.25
VTI1B-201ENST00000216456 RNF34Q969K3 372 aa22.85■■□□□ 1.25
VTI1B-201ENST00000216456 FAM129BQ96TA1 746 aa22.85■■□□□ 1.25
VTI1B-201ENST00000216456 NEUROG2Q9H2A3 272 aa22.85■■□□□ 1.25
VTI1B-201ENST00000216456 EBF2Q9HAK2 575 aa22.85■■□□□ 1.25
VTI1B-201ENST00000216456 TM9SF3Q9HD45 589 aa22.85■■□□□ 1.25
VTI1B-201ENST00000216456 SLTMQ9NWH9 1034 aaKnown RBP eCLIP22.85■■□□□ 1.25
VTI1B-201ENST00000216456 FBXL12Q9NXK8 326 aa22.85■■□□□ 1.25
VTI1B-201ENST00000216456 KIAA1522Q9P206 1035 aaPredicted RBP22.85■■□□□ 1.25
VTI1B-201ENST00000216456 RALYQ9UKM9 306 aaKnown RBP22.85■■□□□ 1.25
VTI1B-201ENST00000216456 SNX11Q9Y5W9 270 aa22.85■■□□□ 1.25
VTI1B-201ENST00000216456 ZZEF1O43149 2961 aa22.84■■□□□ 1.25
VTI1B-201ENST00000216456 IGF2RP11717 2491 aa22.84■■□□□ 1.25
VTI1B-201ENST00000216456 PLK4O00444 970 aa22.84■■□□□ 1.25
VTI1B-201ENST00000216456 HSF2BPO75031 334 aa22.84■■□□□ 1.25
VTI1B-201ENST00000216456 ASLP04424 464 aa22.84■■□□□ 1.25
VTI1B-201ENST00000216456 IGHV4-34P06331 123 aa22.84■■□□□ 1.25
VTI1B-201ENST00000216456 PROS1P07225 676 aa22.84■■□□□ 1.25
VTI1B-201ENST00000216456 PSMD8P48556 350 aa22.84■■□□□ 1.25
VTI1B-201ENST00000216456 RNASE9P60153 205 aaKnown RBP22.84■■□□□ 1.25
VTI1B-201ENST00000216456 RAPGEF1Q13905 1077 aa22.84■■□□□ 1.25
VTI1B-201ENST00000216456 DRAP1Q14919 205 aaPredicted RBP22.84■■□□□ 1.25
VTI1B-201ENST00000216456 TRIP6Q15654 476 aaKnown RBP22.84■■□□□ 1.25
VTI1B-201ENST00000216456 CST6Q15828 149 aa22.84■■□□□ 1.25
VTI1B-201ENST00000216456 TAF3Q5VWG9 929 aa22.84■■□□□ 1.25
VTI1B-201ENST00000216456 CCDC117Q8IWD4 279 aaPredicted RBP22.84■■□□□ 1.25
VTI1B-201ENST00000216456 FAM71AQ8IYT1 594 aa22.84■■□□□ 1.25
VTI1B-201ENST00000216456 GATA6Q92908 595 aa22.84■■□□□ 1.25
VTI1B-201ENST00000216456 PTPRN2Q92932 1015 aa22.84■■□□□ 1.25
VTI1B-201ENST00000216456 FAM81BQ96LP2 452 aa22.84■■□□□ 1.25
VTI1B-201ENST00000216456 TRIM62Q9BVG3 475 aa22.84■■□□□ 1.25
VTI1B-201ENST00000216456 TMPRSS4Q9NRS4 437 aa22.84■■□□□ 1.25
VTI1B-201ENST00000216456 VANGL2Q9ULK5 521 aa22.84■■□□□ 1.25
VTI1B-201ENST00000216456 HS3ST4Q9Y661 456 aa22.84■■□□□ 1.25
VTI1B-201ENST00000216456 KNL1Q8NG31 2342 aa22.83■■□□□ 1.25
VTI1B-201ENST00000216456 PES1O00541 588 aaKnown RBP22.83■■□□□ 1.25
VTI1B-201ENST00000216456 KRT9P35527 623 aa22.83■■□□□ 1.25
VTI1B-201ENST00000216456 SLC6A3Q01959 620 aa22.83■■□□□ 1.25
VTI1B-201ENST00000216456 ZBTB16Q05516 673 aa22.83■■□□□ 1.25
VTI1B-201ENST00000216456 AUHQ13825 339 aaKnown RBP22.83■■□□□ 1.25
VTI1B-201ENST00000216456 TTC31Q49AM3 519 aaPredicted RBP22.83■■□□□ 1.25
VTI1B-201ENST00000216456 EFHC1Q5JVL4 640 aa22.83■■□□□ 1.25
VTI1B-201ENST00000216456 AADATQ8N5Z0 425 aa22.83■■□□□ 1.25
VTI1B-201ENST00000216456 ZNF557Q8N988 423 aaPredicted RBP22.83■■□□□ 1.25
VTI1B-201ENST00000216456 NUP62CLQ9H1M0 184 aa22.83■■□□□ 1.25
VTI1B-201ENST00000216456 FBRSQ9HAH7 460 aa22.83■■□□□ 1.25
VTI1B-201ENST00000216456 PIGVQ9NUD9 493 aa22.83■■□□□ 1.25
VTI1B-201ENST00000216456 ASNSD1Q9NWL6 643 aa22.83■■□□□ 1.25
VTI1B-201ENST00000216456 BTBD3Q9Y2F9 522 aa22.83■■□□□ 1.25
VTI1B-201ENST00000216456 M0QYT0 321 aa22.82■■□□□ 1.24
VTI1B-201ENST00000216456 CBFA2T3O75081 653 aa22.82■■□□□ 1.24
VTI1B-201ENST00000216456 PAGE1O75459 146 aa22.82■■□□□ 1.24
VTI1B-201ENST00000216456 DAB1O75553 588 aa22.82■■□□□ 1.24
VTI1B-201ENST00000216456 RNASEH2AO75792 299 aaKnown RBP22.82■■□□□ 1.24
VTI1B-201ENST00000216456 ADCY5O95622 1261 aa22.82■■□□□ 1.24
VTI1B-201ENST00000216456 GLI1P08151 1106 aa22.82■■□□□ 1.24
VTI1B-201ENST00000216456 ABCB4P21439 1286 aa22.82■■□□□ 1.24
VTI1B-201ENST00000216456 CCR1P32246 355 aa22.82■■□□□ 1.24
VTI1B-201ENST00000216456 MATKP42679 507 aa22.82■■□□□ 1.24
VTI1B-201ENST00000216456 KLK7P49862 253 aa22.82■■□□□ 1.24
VTI1B-201ENST00000216456 GALCP54803 685 aa22.82■■□□□ 1.24
VTI1B-201ENST00000216456 SLC14A1Q13336 389 aa22.82■■□□□ 1.24
VTI1B-201ENST00000216456 KCNJ12Q14500 433 aa22.82■■□□□ 1.24
VTI1B-201ENST00000216456 PRAMEF14Q5SWL7 426 aa22.82■■□□□ 1.24
VTI1B-201ENST00000216456 NCEH1Q6PIU2 408 aa22.82■■□□□ 1.24
VTI1B-201ENST00000216456 SETD7Q8WTS6 366 aaKnown RBP22.82■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms