RNA–Protein interactions for RNA: ENST00000156825.5

MBD3-201, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 1 (best) BASIC

Gene MBD3, Length 5,518 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-201ENST00000156825 SHC3Q92529 594 aa19.21■□□□□ 0.67
MBD3-201ENST00000156825 APPL1Q9UKG1 709 aa19.21■□□□□ 0.67
MBD3-201ENST00000156825 TRHDEQ9UKU6 1024 aa19.21■□□□□ 0.67
MBD3-201ENST00000156825 FAM237AA0A1B0GTK4 181 aa19.21■□□□□ 0.67
MBD3-201ENST00000156825 DARSP14868 501 aaKnown RBP19.21■□□□□ 0.67
MBD3-201ENST00000156825 RANBP1P43487 201 aa19.21■□□□□ 0.67
MBD3-201ENST00000156825 PEX5P50542 639 aa19.21■□□□□ 0.67
MBD3-201ENST00000156825 ACOX1Q15067 660 aa19.21■□□□□ 0.67
MBD3-201ENST00000156825 OTUD3Q5T2D3 398 aaPredicted RBP19.21■□□□□ 0.67
MBD3-201ENST00000156825 NT5DC4Q86YG4 428 aa19.21■□□□□ 0.67
MBD3-201ENST00000156825 MRIQ9BWK5 157 aa19.21■□□□□ 0.67
MBD3-201ENST00000156825 NFKBIZQ9BYH8 718 aa19.21■□□□□ 0.67
MBD3-201ENST00000156825 RMND5AQ9H871 391 aa19.21■□□□□ 0.67
MBD3-201ENST00000156825 LINC00854A0A1B0GVQ3 168 aa19.2■□□□□ 0.66
MBD3-201ENST00000156825 GRTP1Q5TC63 336 aa19.2■□□□□ 0.66
MBD3-201ENST00000156825 TNIP2Q8NFZ5 429 aa19.2■□□□□ 0.66
MBD3-201ENST00000156825 PRCCQ92733 491 aaPredicted RBP19.2■□□□□ 0.66
MBD3-201ENST00000156825 FAM120BQ96EK7 910 aaKnown RBP19.2■□□□□ 0.66
MBD3-201ENST00000156825 LGMNQ99538 433 aa19.2■□□□□ 0.66
MBD3-201ENST00000156825 YDJCA8MPS7 323 aa19.2■□□□□ 0.66
MBD3-201ENST00000156825 RUNX1T1Q06455 604 aa19.2■□□□□ 0.66
MBD3-201ENST00000156825 LRRC8DQ7L1W4 858 aa19.2■□□□□ 0.66
MBD3-201ENST00000156825 SERAC1Q96JX3 654 aa19.2■□□□□ 0.66
MBD3-201ENST00000156825 NXF3Q9H4D5 531 aaKnown RBP19.2■□□□□ 0.66
MBD3-201ENST00000156825 RXFP1Q9HBX9 757 aa19.2■□□□□ 0.66
MBD3-201ENST00000156825 ST3GAL5Q9UNP4 418 aa19.2■□□□□ 0.66
MBD3-201ENST00000156825 GTF3C5Q9Y5Q8 519 aaPredicted RBP19.2■□□□□ 0.66
MBD3-201ENST00000156825 SPATA31C2B4DYI2 1134 aa19.2■□□□□ 0.66
MBD3-201ENST00000156825 DAB1O75553 588 aa19.2■□□□□ 0.66
MBD3-201ENST00000156825 CAPZA2P47755 286 aa19.2■□□□□ 0.66
MBD3-201ENST00000156825 MAXP61244 160 aa19.2■□□□□ 0.66
MBD3-201ENST00000156825 BCL2L1Q07817 233 aa19.2■□□□□ 0.66
MBD3-201ENST00000156825 ZACNQ401N2 412 aa19.2■□□□□ 0.66
MBD3-201ENST00000156825 POLNQ7Z5Q5 900 aa19.2■□□□□ 0.66
MBD3-201ENST00000156825 NECAB2Q7Z6G3 386 aa19.2■□□□□ 0.66
MBD3-201ENST00000156825 MIEF1Q9NQG6 463 aa19.2■□□□□ 0.66
MBD3-201ENST00000156825 KDM1AO60341 852 aa19.2■□□□□ 0.66
MBD3-201ENST00000156825 GOT1P17174 413 aa19.2■□□□□ 0.66
MBD3-201ENST00000156825 PTPN4P29074 926 aa19.2■□□□□ 0.66
MBD3-201ENST00000156825 RPL22P35268 128 aaKnown RBP19.2■□□□□ 0.66
MBD3-201ENST00000156825 CD86P42081 329 aa19.2■□□□□ 0.66
MBD3-201ENST00000156825 TUFMP49411 452 aaKnown RBP19.2■□□□□ 0.66
MBD3-201ENST00000156825 PRELID2Q8N945 189 aa19.2■□□□□ 0.66
MBD3-201ENST00000156825 FIG4Q92562 907 aa19.2■□□□□ 0.66
MBD3-201ENST00000156825 MTFMTQ96DP5 389 aaKnown RBP19.2■□□□□ 0.66
MBD3-201ENST00000156825 PRDM12Q9H4Q4 367 aa19.2■□□□□ 0.66
MBD3-201ENST00000156825 A0A0B4J269 797 aa19.2■□□□□ 0.66
MBD3-201ENST00000156825 ZNF7P17097 686 aaPredicted RBP19.2■□□□□ 0.66
MBD3-201ENST00000156825 ZCCHC9Q8N567 271 aaKnown RBP19.2■□□□□ 0.66
MBD3-201ENST00000156825 PPLO60437 1756 aa19.19■□□□□ 0.66
MBD3-201ENST00000156825 KRT87PA6NCN2 255 aa19.19■□□□□ 0.66
MBD3-201ENST00000156825 NPY2RP49146 381 aa19.19■□□□□ 0.66
MBD3-201ENST00000156825 VAC14Q08AM6 782 aa19.19■□□□□ 0.66
MBD3-201ENST00000156825 CCDC142Q17RM4 750 aa19.19■□□□□ 0.66
MBD3-201ENST00000156825 IZUMO2Q6UXV1 221 aa19.19■□□□□ 0.66
MBD3-201ENST00000156825 LZTR1Q8N653 840 aa19.19■□□□□ 0.66
MBD3-201ENST00000156825 CASP10Q92851 521 aa19.19■□□□□ 0.66
MBD3-201ENST00000156825 DPY30Q9C005 99 aa19.19■□□□□ 0.66
MBD3-201ENST00000156825 NMRAL1Q9HBL8 299 aa19.19■□□□□ 0.66
MBD3-201ENST00000156825 ABCC13Q9NSE7 274 aa19.19■□□□□ 0.66
MBD3-201ENST00000156825 GRK3P35626 688 aa19.19■□□□□ 0.66
MBD3-201ENST00000156825 BRCC3P46736 316 aa19.19■□□□□ 0.66
MBD3-201ENST00000156825 TAS2R40P59535 323 aa19.19■□□□□ 0.66
MBD3-201ENST00000156825 PRKAA1Q13131 559 aa19.19■□□□□ 0.66
MBD3-201ENST00000156825 DDR2Q16832 855 aa19.19■□□□□ 0.66
MBD3-201ENST00000156825 NEPROQ6NW34 567 aa19.19■□□□□ 0.66
MBD3-201ENST00000156825 ARHGEF28Q8N1W1 1705 aaKnown RBP19.19■□□□□ 0.66
MBD3-201ENST00000156825 MPOP05164 745 aa19.19■□□□□ 0.66
MBD3-201ENST00000156825 ACADMP11310 421 aa19.19■□□□□ 0.66
MBD3-201ENST00000156825 ATP5C1P36542 298 aaKnown RBP19.19■□□□□ 0.66
MBD3-201ENST00000156825 PCYT1AP49585 367 aa19.19■□□□□ 0.66
MBD3-201ENST00000156825 ZNF143P52747 638 aaPredicted RBP19.19■□□□□ 0.66
MBD3-201ENST00000156825 SLC45A4Q5BKX6 768 aa19.19■□□□□ 0.66
MBD3-201ENST00000156825 PPM1LQ5SGD2 360 aa19.19■□□□□ 0.66
MBD3-201ENST00000156825 ZBTB49Q6ZSB9 765 aa19.19■□□□□ 0.66
MBD3-201ENST00000156825 KYQ8NBH2 561 aa19.19■□□□□ 0.66
MBD3-201ENST00000156825 TRPC4APQ8TEL6 797 aa19.19■□□□□ 0.66
MBD3-201ENST00000156825 B3GNT5Q9BYG0 378 aa19.19■□□□□ 0.66
MBD3-201ENST00000156825 BPIFA1Q9NP55 256 aa19.19■□□□□ 0.66
MBD3-201ENST00000156825 TPP1O14773 563 aa19.19■□□□□ 0.66
MBD3-201ENST00000156825 RTN3O95197 1032 aaPredicted RBP19.19■□□□□ 0.66
MBD3-201ENST00000156825 ARF4P18085 180 aaPredicted RBP19.19■□□□□ 0.66
MBD3-201ENST00000156825 NEK2P51955 445 aa19.19■□□□□ 0.66
MBD3-201ENST00000156825 SPANXN3Q5MJ09 141 aa19.19■□□□□ 0.66
MBD3-201ENST00000156825 MARK2Q7KZI7 788 aaKnown RBP19.19■□□□□ 0.66
MBD3-201ENST00000156825 ZSCAN18Q8TBC5 510 aaPredicted RBP19.19■□□□□ 0.66
MBD3-201ENST00000156825 POMKQ9H5K3 350 aa19.19■□□□□ 0.66
MBD3-201ENST00000156825 IFRD1O00458 451 aaPredicted RBP19.18■□□□□ 0.66
MBD3-201ENST00000156825 INPP4BO15327 924 aa19.18■□□□□ 0.66
MBD3-201ENST00000156825 SEC22BO75396 215 aa19.18■□□□□ 0.66
MBD3-201ENST00000156825 NFKB1P19838 968 aa19.18■□□□□ 0.66
MBD3-201ENST00000156825 MAPK9P45984 424 aa19.18■□□□□ 0.66
MBD3-201ENST00000156825 UNC5AQ6ZN44 842 aa19.18■□□□□ 0.66
MBD3-201ENST00000156825 SLC22A9Q8IVM8 553 aa19.18■□□□□ 0.66
MBD3-201ENST00000156825 CPNE1Q99829 537 aa19.18■□□□□ 0.66
MBD3-201ENST00000156825 BBS2Q9BXC9 721 aa19.18■□□□□ 0.66
MBD3-201ENST00000156825 RNPEPQ9H4A4 650 aa19.18■□□□□ 0.66
MBD3-201ENST00000156825 IPPQ9Y573 584 aa19.18■□□□□ 0.66
MBD3-201ENST00000156825 MROH1Q8NDA8 1641 aa19.18■□□□□ 0.66
MBD3-201ENST00000156825 DEAF1O75398 565 aaPredicted RBP19.18■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms