RNA–Protein interactions for RNA: ENST00000055335.10

PPP1R3F-201, Transcript of protein phosphatase 1 regulatory subunit 3F, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PPP1R3F, Length 3,421 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3F-201ENST00000055335 COQ10BQ9H8M1 238 aa20.55■□□□□ 0.88
PPP1R3F-201ENST00000055335 RRN3Q9NYV6 651 aa20.55■□□□□ 0.88
PPP1R3F-201ENST00000055335 ME2P23368 584 aa20.55■□□□□ 0.88
PPP1R3F-201ENST00000055335 SOX11P35716 441 aa20.55■□□□□ 0.88
PPP1R3F-201ENST00000055335 RIN3Q8TB24 985 aa20.55■□□□□ 0.88
PPP1R3F-201ENST00000055335 SGF29Q96ES7 293 aa20.55■□□□□ 0.88
PPP1R3F-201ENST00000055335 LHX5Q9H2C1 402 aa20.55■□□□□ 0.88
PPP1R3F-201ENST00000055335 DHX33Q9H6R0 707 aaKnown RBP20.55■□□□□ 0.88
PPP1R3F-201ENST00000055335 SUDS3Q9H7L9 328 aaPredicted RBP20.55■□□□□ 0.88
PPP1R3F-201ENST00000055335 RNF19AQ9NV58 838 aa20.55■□□□□ 0.88
PPP1R3F-201ENST00000055335 MOCS1Q9NZB8 636 aa20.55■□□□□ 0.88
PPP1R3F-201ENST00000055335 A0A096LPK6 155 aa20.54■□□□□ 0.88
PPP1R3F-201ENST00000055335 RGSL1A5PLK6 1076 aa20.54■□□□□ 0.88
PPP1R3F-201ENST00000055335 PLA2G6O60733 806 aa20.54■□□□□ 0.88
PPP1R3F-201ENST00000055335 MT-CO1P00395 513 aa20.54■□□□□ 0.88
PPP1R3F-201ENST00000055335 HOXC6P09630 235 aa20.54■□□□□ 0.88
PPP1R3F-201ENST00000055335 CLVS1Q8IUQ0 354 aaPredicted RBP20.54■□□□□ 0.88
PPP1R3F-201ENST00000055335 AHI1Q8N157 1196 aa20.54■□□□□ 0.88
PPP1R3F-201ENST00000055335 TRAPPC12Q8WVT3 735 aa20.54■□□□□ 0.88
PPP1R3F-201ENST00000055335 LRTOMTQ8WZ04 291 aa20.54■□□□□ 0.88
PPP1R3F-201ENST00000055335 MCRS1Q96EZ8 462 aa20.54■□□□□ 0.88
PPP1R3F-201ENST00000055335 MKS1Q9NXB0 559 aa20.54■□□□□ 0.88
PPP1R3F-201ENST00000055335 WNK3Q9BYP7 1800 aa20.54■□□□□ 0.88
PPP1R3F-201ENST00000055335 PDGFRBP09619 1106 aa20.54■□□□□ 0.88
PPP1R3F-201ENST00000055335 ARL2P36404 184 aa20.54■□□□□ 0.88
PPP1R3F-201ENST00000055335 NAGLUP54802 743 aa20.54■□□□□ 0.88
PPP1R3F-201ENST00000055335 RALGDSQ12967 914 aa20.54■□□□□ 0.88
PPP1R3F-201ENST00000055335 BOLA3Q53S33 107 aa20.54■□□□□ 0.88
PPP1R3F-201ENST00000055335 EPGNQ6UW88 154 aa20.54■□□□□ 0.88
PPP1R3F-201ENST00000055335 SPNS2Q8IVW8 549 aa20.54■□□□□ 0.88
PPP1R3F-201ENST00000055335 CPNE9Q8IYJ1 553 aa20.54■□□□□ 0.88
PPP1R3F-201ENST00000055335 DDI1Q8WTU0 396 aa20.54■□□□□ 0.88
PPP1R3F-201ENST00000055335 ILKAPQ9H0C8 392 aaPredicted RBP20.54■□□□□ 0.88
PPP1R3F-201ENST00000055335 STN1Q9H668 368 aaKnown RBP20.54■□□□□ 0.88
PPP1R3F-201ENST00000055335 TASP1Q9H6P5 420 aa20.54■□□□□ 0.88
PPP1R3F-201ENST00000055335 CROCCQ5TZA2 2017 aa20.53■□□□□ 0.88
PPP1R3F-201ENST00000055335 PALM2-AKAP2B1ALY0 433 aaPredicted RBP20.53■□□□□ 0.88
PPP1R3F-201ENST00000055335 TK2O00142 265 aa20.53■□□□□ 0.88
PPP1R3F-201ENST00000055335 PIGNO95427 931 aa20.53■□□□□ 0.88
PPP1R3F-201ENST00000055335 CDK18Q07002 472 aa20.53■□□□□ 0.88
PPP1R3F-201ENST00000055335 MAP1SQ66K74 1059 aaPredicted RBP20.53■□□□□ 0.88
PPP1R3F-201ENST00000055335 RBM12BQ8IXT5 1001 aaKnown RBP20.53■□□□□ 0.88
PPP1R3F-201ENST00000055335 GATA5Q9BWX5 397 aaPredicted RBP20.53■□□□□ 0.88
PPP1R3F-201ENST00000055335 RBM38Q9H0Z9 239 aaKnown RBP20.53■□□□□ 0.88
PPP1R3F-201ENST00000055335 EPB41L1Q9H4G0 881 aa20.53■□□□□ 0.88
PPP1R3F-201ENST00000055335 FAM96AQ9H5X1 160 aa20.53■□□□□ 0.88
PPP1R3F-201ENST00000055335 THEGQ9P2T0 379 aa20.53■□□□□ 0.88
PPP1R3F-201ENST00000055335 RIMS3Q9UJD0 308 aa20.53■□□□□ 0.88
PPP1R3F-201ENST00000055335 ZNF510Q9Y2H8 683 aa20.53■□□□□ 0.88
PPP1R3F-201ENST00000055335 CEPT1Q9Y6K0 416 aa20.53■□□□□ 0.88
PPP1R3F-201ENST00000055335 KCNK1O00180 336 aa20.53■□□□□ 0.88
PPP1R3F-201ENST00000055335 VWA5AO00534 786 aa20.53■□□□□ 0.88
PPP1R3F-201ENST00000055335 PAPSS1O43252 624 aaPredicted RBP20.53■□□□□ 0.88
PPP1R3F-201ENST00000055335 TPST1O60507 370 aa20.53■□□□□ 0.88
PPP1R3F-201ENST00000055335 GARSP41250 739 aaKnown RBP20.53■□□□□ 0.88
PPP1R3F-201ENST00000055335 NAA20P61599 178 aa20.53■□□□□ 0.88
PPP1R3F-201ENST00000055335 SLC44A4Q53GD3 710 aa20.53■□□□□ 0.88
PPP1R3F-201ENST00000055335 RNF168Q8IYW5 571 aaPredicted RBP20.53■□□□□ 0.88
PPP1R3F-201ENST00000055335 SREK1Q8WXA9 508 aaKnown RBP20.53■□□□□ 0.88
PPP1R3F-201ENST00000055335 LPIN3Q9BQK8 851 aa20.53■□□□□ 0.88
PPP1R3F-201ENST00000055335 RPF1Q9H9Y2 349 aaKnown RBP20.53■□□□□ 0.88
PPP1R3F-201ENST00000055335 SLC39A10Q9ULF5 831 aa20.53■□□□□ 0.88
PPP1R3F-201ENST00000055335 BCLAF3A2AJT9 711 aaKnown RBP20.53■□□□□ 0.88
PPP1R3F-201ENST00000055335 JUNP05412 331 aaKnown RBP20.53■□□□□ 0.88
PPP1R3F-201ENST00000055335 MYL4P12829 197 aa20.53■□□□□ 0.88
PPP1R3F-201ENST00000055335 ARSAP15289 507 aa20.53■□□□□ 0.88
PPP1R3F-201ENST00000055335 TGM2P21980 687 aa20.53■□□□□ 0.88
PPP1R3F-201ENST00000055335 PSMB4P28070 264 aa20.53■□□□□ 0.88
PPP1R3F-201ENST00000055335 DPP6P42658 865 aa20.53■□□□□ 0.88
PPP1R3F-201ENST00000055335 NDST1P52848 882 aa20.53■□□□□ 0.88
PPP1R3F-201ENST00000055335 SEL1L3Q68CR1 1132 aa20.53■□□□□ 0.88
PPP1R3F-201ENST00000055335 ZNF554Q86TJ5 538 aa20.53■□□□□ 0.88
PPP1R3F-201ENST00000055335 APBB2Q92870 758 aa20.53■□□□□ 0.88
PPP1R3F-201ENST00000055335 DEFB129Q9H1M3 183 aa20.53■□□□□ 0.88
PPP1R3F-201ENST00000055335 BTAF1O14981 1849 aa20.53■□□□□ 0.88
PPP1R3F-201ENST00000055335 SCN9AQ15858 1988 aa20.52■□□□□ 0.88
PPP1R3F-201ENST00000055335 PHGDHO43175 533 aaKnown RBP20.52■□□□□ 0.88
PPP1R3F-201ENST00000055335 PRKCGP05129 697 aa20.52■□□□□ 0.88
PPP1R3F-201ENST00000055335 CKMT2P17540 419 aa20.52■□□□□ 0.88
PPP1R3F-201ENST00000055335 AP3M2P53677 418 aa20.52■□□□□ 0.88
PPP1R3F-201ENST00000055335 CBX3Q13185 183 aa20.52■□□□□ 0.88
PPP1R3F-201ENST00000055335 PTK2BQ14289 1009 aa20.52■□□□□ 0.88
PPP1R3F-201ENST00000055335 MCUQ8NE86 351 aa20.52■□□□□ 0.88
PPP1R3F-201ENST00000055335 TIMMDC1Q9NPL8 285 aa20.52■□□□□ 0.88
PPP1R3F-201ENST00000055335 PCDHB12Q9Y5F1 795 aa20.52■□□□□ 0.88
PPP1R3F-201ENST00000055335 TMEM233B4DJY2 109 aa20.52■□□□□ 0.88
PPP1R3F-201ENST00000055335 HDCP19113 662 aa20.52■□□□□ 0.88
PPP1R3F-201ENST00000055335 ANKDD1AQ495B1 522 aa20.52■□□□□ 0.88
PPP1R3F-201ENST00000055335 MTX3Q5HYI7 312 aa20.52■□□□□ 0.88
PPP1R3F-201ENST00000055335 ZBTB8OSQ8IWT0 167 aa20.52■□□□□ 0.88
PPP1R3F-201ENST00000055335 NLGN1Q8N2Q7 840 aa20.52■□□□□ 0.88
PPP1R3F-201ENST00000055335 KBTBD7Q8WVZ9 684 aa20.52■□□□□ 0.88
PPP1R3F-201ENST00000055335 C7orf72A4D263 438 aa20.52■□□□□ 0.87
PPP1R3F-201ENST00000055335 AP1G1O43747 822 aa20.52■□□□□ 0.87
PPP1R3F-201ENST00000055335 MSCO60682 206 aa20.52■□□□□ 0.87
PPP1R3F-201ENST00000055335 TRIM13O60858 407 aa20.52■□□□□ 0.87
PPP1R3F-201ENST00000055335 EMP3P54852 163 aa20.52■□□□□ 0.87
PPP1R3F-201ENST00000055335 PDK2Q15119 407 aa20.52■□□□□ 0.87
PPP1R3F-201ENST00000055335 ZNF423Q2M1K9 1284 aa20.52■□□□□ 0.87
PPP1R3F-201ENST00000055335 PID1Q7Z2X4 250 aa20.52■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms