RNA–Protein interactions for RNA: ENST00000035307.6

CHPF2-201, Transcript of chondroitin polymerizing factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHPF2, Length 3,978 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF2-201ENST00000035307 CAPN15O75808 1086 aa12.35□□□□□ -0.43
CHPF2-201ENST00000035307 CYBAP13498 195 aa12.35□□□□□ -0.43
CHPF2-201ENST00000035307 SELPP16109 830 aa12.35□□□□□ -0.43
CHPF2-201ENST00000035307 PAMP19021 973 aa12.35□□□□□ -0.43
CHPF2-201ENST00000035307 MMP13P45452 471 aa12.35□□□□□ -0.43
CHPF2-201ENST00000035307 GHRHRQ02643 423 aa12.35□□□□□ -0.43
CHPF2-201ENST00000035307 IKBKEQ14164 716 aa12.35□□□□□ -0.43
CHPF2-201ENST00000035307 ITIH4Q14624 930 aa12.35□□□□□ -0.43
CHPF2-201ENST00000035307 PLEKHA7Q6IQ23 1121 aa12.35□□□□□ -0.43
CHPF2-201ENST00000035307 NUP93Q8N1F7 819 aa12.35□□□□□ -0.43
CHPF2-201ENST00000035307 AGAP11Q8TF27 550 aa12.35□□□□□ -0.43
CHPF2-201ENST00000035307 PHF21BQ96EK2 531 aa12.35□□□□□ -0.43
CHPF2-201ENST00000035307 EXOC2Q96KP1 924 aa12.35□□□□□ -0.43
CHPF2-201ENST00000035307 CXorf56Q9H5V9 222 aa12.35□□□□□ -0.43
CHPF2-201ENST00000035307 IGFLR1Q9H665 355 aa12.35□□□□□ -0.43
CHPF2-201ENST00000035307 RXFP1Q9HBX9 757 aa12.35□□□□□ -0.43
CHPF2-201ENST00000035307 DMAP1Q9NPF5 467 aaPredicted RBP12.35□□□□□ -0.43
CHPF2-201ENST00000035307 UTP6Q9NYH9 597 aaKnown RBP12.35□□□□□ -0.43
CHPF2-201ENST00000035307 TNS1Q9HBL0 1735 aaKnown RBP12.35□□□□□ -0.43
CHPF2-201ENST00000035307 TCRBV9S1A1TA0A576 114 aa12.35□□□□□ -0.43
CHPF2-201ENST00000035307 MGEA5O60502 916 aa12.35□□□□□ -0.43
CHPF2-201ENST00000035307 SEC24DO94855 1032 aaPredicted RBP12.35□□□□□ -0.43
CHPF2-201ENST00000035307 PIGRP01833 764 aa12.35□□□□□ -0.43
CHPF2-201ENST00000035307 DRG2P55039 364 aaKnown RBP12.35□□□□□ -0.43
CHPF2-201ENST00000035307 CYTH1Q15438 398 aa12.35□□□□□ -0.43
CHPF2-201ENST00000035307 MAP3K21Q5TCX8 1036 aa12.35□□□□□ -0.43
CHPF2-201ENST00000035307 CAPRIN2Q6IMN6 1127 aaKnown RBP12.35□□□□□ -0.43
CHPF2-201ENST00000035307 CMC1Q7Z7K0 106 aa12.35□□□□□ -0.43
CHPF2-201ENST00000035307 SMG8Q8ND04 991 aaKnown RBP12.35□□□□□ -0.43
CHPF2-201ENST00000035307 RSPH1Q8WYR4 309 aa12.35□□□□□ -0.43
CHPF2-201ENST00000035307 SMARCD1Q96GM5 515 aa12.35□□□□□ -0.43
CHPF2-201ENST00000035307 TUBB6Q9BUF5 446 aa12.35□□□□□ -0.43
CHPF2-201ENST00000035307 KDM4CQ9H3R0 1056 aa12.35□□□□□ -0.43
CHPF2-201ENST00000035307 XAB2Q9HCS7 855 aaKnown RBP12.35□□□□□ -0.43
CHPF2-201ENST00000035307 DLGAP2Q9P1A6 1054 aa12.35□□□□□ -0.43
CHPF2-201ENST00000035307 SLC17A6Q9P2U8 582 aa12.35□□□□□ -0.43
CHPF2-201ENST00000035307 AURKCQ9UQB9 309 aa12.35□□□□□ -0.43
CHPF2-201ENST00000035307 DOCK5Q9H7D0 1870 aa12.35□□□□□ -0.43
CHPF2-201ENST00000035307 ADGRA2Q96PE1 1338 aa12.35□□□□□ -0.43
CHPF2-201ENST00000035307 KRT16P08779 473 aa12.35□□□□□ -0.43
CHPF2-201ENST00000035307 GPD2P43304 727 aa12.35□□□□□ -0.43
CHPF2-201ENST00000035307 NUDT2P50583 147 aa12.35□□□□□ -0.43
CHPF2-201ENST00000035307 LBX1P52954 281 aa12.35□□□□□ -0.43
CHPF2-201ENST00000035307 ELF3P78545 371 aaPredicted RBP12.35□□□□□ -0.43
CHPF2-201ENST00000035307 BTKQ06187 659 aa12.35□□□□□ -0.43
CHPF2-201ENST00000035307 TWF1Q12792 350 aa12.35□□□□□ -0.43
CHPF2-201ENST00000035307 PDK2Q15119 407 aa12.35□□□□□ -0.43
CHPF2-201ENST00000035307 PTAR1Q7Z6K3 402 aaPredicted RBP12.35□□□□□ -0.43
CHPF2-201ENST00000035307 CCDC185Q8N715 623 aa12.35□□□□□ -0.43
CHPF2-201ENST00000035307 MARK4Q96L34 752 aa12.35□□□□□ -0.43
CHPF2-201ENST00000035307 RNF157Q96PX1 679 aa12.35□□□□□ -0.43
CHPF2-201ENST00000035307 KIAA1257Q9ULG3 409 aa12.35□□□□□ -0.43
CHPF2-201ENST00000035307 LYPLA1O75608 230 aaPredicted RBP12.34□□□□□ -0.43
CHPF2-201ENST00000035307 VAPBO95292 243 aa12.34□□□□□ -0.43
CHPF2-201ENST00000035307 PIRTP0C851 137 aa12.34□□□□□ -0.43
CHPF2-201ENST00000035307 GJA1P17302 382 aa12.34□□□□□ -0.43
CHPF2-201ENST00000035307 TCHHL1Q5QJ38 904 aaPredicted RBP12.34□□□□□ -0.43
CHPF2-201ENST00000035307 TMTC4Q5T4D3 741 aa12.34□□□□□ -0.43
CHPF2-201ENST00000035307 KRT80Q6KB66 452 aa12.34□□□□□ -0.43
CHPF2-201ENST00000035307 CIR1Q86X95 450 aaPredicted RBP12.34□□□□□ -0.43
CHPF2-201ENST00000035307 DDX1Q92499 740 aaKnown RBP12.34□□□□□ -0.43
CHPF2-201ENST00000035307 HERPUD2Q9BSE4 406 aa12.34□□□□□ -0.43
CHPF2-201ENST00000035307 FICDQ9BVA6 458 aa12.34□□□□□ -0.43
CHPF2-201ENST00000035307 NT5MQ9NPB1 228 aa12.34□□□□□ -0.43
CHPF2-201ENST00000035307 ZDHHC18Q9NUE0 388 aa12.34□□□□□ -0.43
CHPF2-201ENST00000035307 ETNK2Q9NVF9 386 aa12.34□□□□□ -0.43
CHPF2-201ENST00000035307 SLC24A2Q9UI40 661 aa12.34□□□□□ -0.43
CHPF2-201ENST00000035307 TCRBV7S3A2A0A539 114 aa12.34□□□□□ -0.43
CHPF2-201ENST00000035307 FSCBQ5H9T9 825 aa12.34□□□□□ -0.43
CHPF2-201ENST00000035307 LRRC8EQ6NSJ5 796 aa12.34□□□□□ -0.43
CHPF2-201ENST00000035307 TPGS1Q6ZTW0 290 aa12.34□□□□□ -0.43
CHPF2-201ENST00000035307 BBS12Q6ZW61 710 aa12.34□□□□□ -0.43
CHPF2-201ENST00000035307 ZC3H3Q8IXZ2 948 aaKnown RBP12.34□□□□□ -0.43
CHPF2-201ENST00000035307 USP13Q92995 863 aaPredicted RBP12.34□□□□□ -0.43
CHPF2-201ENST00000035307 TRIM4Q9C037 500 aa12.34□□□□□ -0.43
CHPF2-201ENST00000035307 QSER1Q2KHR3 1735 aa12.34□□□□□ -0.43
CHPF2-201ENST00000035307 NVLO15381 856 aaKnown RBP12.34□□□□□ -0.43
CHPF2-201ENST00000035307 TSPAN8P19075 237 aa12.34□□□□□ -0.43
CHPF2-201ENST00000035307 PAPOLAP51003 745 aaKnown RBP12.34□□□□□ -0.43
CHPF2-201ENST00000035307 ZNF143P52747 638 aaPredicted RBP12.34□□□□□ -0.43
CHPF2-201ENST00000035307 MAXP61244 160 aa12.34□□□□□ -0.43
CHPF2-201ENST00000035307 SLAIN1Q8ND83 568 aa12.34□□□□□ -0.43
CHPF2-201ENST00000035307 DIS3LQ8TF46 1054 aaKnown RBP12.34□□□□□ -0.43
CHPF2-201ENST00000035307 DNAJC9Q8WXX5 260 aa12.34□□□□□ -0.43
CHPF2-201ENST00000035307 NDFIP2Q9NV92 336 aa12.34□□□□□ -0.43
CHPF2-201ENST00000035307 EPS15L1Q9UBC2 864 aa12.34□□□□□ -0.43
CHPF2-201ENST00000035307 MTO1Q9Y2Z2 717 aaKnown RBP12.34□□□□□ -0.43
CHPF2-201ENST00000035307 URODP06132 367 aa12.33□□□□□ -0.44
CHPF2-201ENST00000035307 SETSIPP0DME0 302 aa12.33□□□□□ -0.44
CHPF2-201ENST00000035307 MBL2P11226 248 aaPredicted RBP12.33□□□□□ -0.44
CHPF2-201ENST00000035307 TAC1P20366 129 aa12.33□□□□□ -0.44
CHPF2-201ENST00000035307 MSX2P35548 267 aaPredicted RBP12.33□□□□□ -0.44
CHPF2-201ENST00000035307 CDKN2BP42772 138 aa12.33□□□□□ -0.44
CHPF2-201ENST00000035307 AP2B1P63010 937 aa12.33□□□□□ -0.44
CHPF2-201ENST00000035307 CSHL1Q14406 222 aa12.33□□□□□ -0.44
CHPF2-201ENST00000035307 TRABD2AQ86V40 505 aa12.33□□□□□ -0.44
CHPF2-201ENST00000035307 ECHDC2Q86YB7 292 aa12.33□□□□□ -0.44
CHPF2-201ENST00000035307 MSL3Q8N5Y2 521 aaKnown RBP12.33□□□□□ -0.44
CHPF2-201ENST00000035307 LRRC52Q8N7C0 313 aa12.33□□□□□ -0.44
CHPF2-201ENST00000035307 MIPOL1Q8TD10 442 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms