RNA–Protein interactions for RNA: ENST00000011653.8

CD4-201, Transcript of CD4 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD4, Length 3,114 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD4-201ENST00000011653 NPY6RQ99463 290 aa10.86□□□□□ -0.67
CD4-201ENST00000011653 C11orf84Q9BUA3 381 aaPredicted RBP10.86□□□□□ -0.67
CD4-201ENST00000011653 GKN1Q9NS71 199 aa10.86□□□□□ -0.67
CD4-201ENST00000011653 PRKAG3Q9UGI9 489 aa10.86□□□□□ -0.67
CD4-201ENST00000011653 MSRAQ9UJ68 235 aa10.86□□□□□ -0.67
CD4-201ENST00000011653 NEU2Q9Y3R4 380 aa10.86□□□□□ -0.67
CD4-201ENST00000011653 LTBP2Q14767 1821 aa10.86□□□□□ -0.67
CD4-201ENST00000011653 C2orf71A6NGG8 1288 aa10.86□□□□□ -0.67
CD4-201ENST00000011653 RASA4BC9J798 803 aa10.86□□□□□ -0.67
CD4-201ENST00000011653 F5H423 210 aaPredicted RBP10.86□□□□□ -0.67
CD4-201ENST00000011653 TRDMT1O14717 391 aaKnown RBP10.86□□□□□ -0.67
CD4-201ENST00000011653 RASA4O43374 803 aa10.86□□□□□ -0.67
CD4-201ENST00000011653 IFNB1P01574 187 aa10.86□□□□□ -0.67
CD4-201ENST00000011653 ABHD2P08910 425 aa10.86□□□□□ -0.67
CD4-201ENST00000011653 GOT1P17174 413 aa10.86□□□□□ -0.67
CD4-201ENST00000011653 AMPD1P23109 780 aa10.86□□□□□ -0.67
CD4-201ENST00000011653 LMNB2Q03252 620 aa10.86□□□□□ -0.67
CD4-201ENST00000011653 RAB33AQ14088 237 aa10.86□□□□□ -0.67
CD4-201ENST00000011653 TMED2Q15363 201 aa10.86□□□□□ -0.67
CD4-201ENST00000011653 ADGRD2Q7Z7M1 963 aa10.86□□□□□ -0.67
CD4-201ENST00000011653 MON1AQ86VX9 555 aa10.86□□□□□ -0.67
CD4-201ENST00000011653 KATNAL2Q8IYT4 538 aa10.86□□□□□ -0.67
CD4-201ENST00000011653 MRPL43Q8N983 215 aaKnown RBP10.86□□□□□ -0.67
CD4-201ENST00000011653 RSRC1Q96IZ7 334 aaKnown RBP10.86□□□□□ -0.67
CD4-201ENST00000011653 ABCC13Q9NSE7 274 aa10.86□□□□□ -0.67
CD4-201ENST00000011653 CDH22Q9UJ99 828 aa10.86□□□□□ -0.67
CD4-201ENST00000011653 USP3Q9Y6I4 520 aa10.86□□□□□ -0.67
CD4-201ENST00000011653 FAM47DPA6NHR8 397 aa10.85□□□□□ -0.67
CD4-201ENST00000011653 FAM72CH0Y354 149 aa10.85□□□□□ -0.67
CD4-201ENST00000011653 GABRR2P28476 465 aa10.85□□□□□ -0.67
CD4-201ENST00000011653 MAGEA11P43364 429 aa10.85□□□□□ -0.67
CD4-201ENST00000011653 CLNS1AP54105 237 aaKnown RBP10.85□□□□□ -0.67
CD4-201ENST00000011653 EPHB3P54753 998 aa10.85□□□□□ -0.67
CD4-201ENST00000011653 NRLP54845 237 aa10.85□□□□□ -0.67
CD4-201ENST00000011653 NR1H3Q13133 447 aa10.85□□□□□ -0.67
CD4-201ENST00000011653 CAMK1Q14012 370 aa10.85□□□□□ -0.67
CD4-201ENST00000011653 FAM72AQ5TYM5 149 aa10.85□□□□□ -0.67
CD4-201ENST00000011653 OTUD1Q5VV17 481 aaPredicted RBP10.85□□□□□ -0.67
CD4-201ENST00000011653 RNF43Q68DV7 783 aa10.85□□□□□ -0.67
CD4-201ENST00000011653 TXNDC8Q6A555 127 aa10.85□□□□□ -0.67
CD4-201ENST00000011653 PM20D1Q6GTS8 502 aa10.85□□□□□ -0.67
CD4-201ENST00000011653 FAM72DQ6L9T8 149 aa10.85□□□□□ -0.67
CD4-201ENST00000011653 FAM72BQ86X60 149 aa10.85□□□□□ -0.67
CD4-201ENST00000011653 FITM2Q8N6M3 262 aa10.85□□□□□ -0.67
CD4-201ENST00000011653 EXD1Q8NHP7 514 aa10.85□□□□□ -0.67
CD4-201ENST00000011653 FBF1Q8TES7 1133 aa10.85□□□□□ -0.67
CD4-201ENST00000011653 STAMBPL1Q96FJ0 436 aa10.85□□□□□ -0.67
CD4-201ENST00000011653 RBM15Q96T37 977 aaKnown RBP eCLIP10.85□□□□□ -0.67
CD4-201ENST00000011653 EMILIN2Q9BXX0 1053 aa10.85□□□□□ -0.67
CD4-201ENST00000011653 EBF2Q9HAK2 575 aa10.85□□□□□ -0.67
CD4-201ENST00000011653 CYLDQ9NQC7 956 aa10.85□□□□□ -0.67
CD4-201ENST00000011653 TLR8Q9NR97 1041 aaKnown RBP10.85□□□□□ -0.67
CD4-201ENST00000011653 C2orf78A6NCI8 922 aa10.85□□□□□ -0.67
CD4-201ENST00000011653 ABLIM3O94929 683 aa10.85□□□□□ -0.67
CD4-201ENST00000011653 ALADP13716 330 aa10.85□□□□□ -0.67
CD4-201ENST00000011653 MAGEA4P43358 317 aa10.85□□□□□ -0.67
CD4-201ENST00000011653 RPL34P49207 117 aaKnown RBP10.85□□□□□ -0.67
CD4-201ENST00000011653 NTHL1P78549 312 aa10.85□□□□□ -0.67
CD4-201ENST00000011653 SYCP2LQ5T4T6 812 aa10.85□□□□□ -0.67
CD4-201ENST00000011653 RCOR2Q8IZ40 523 aa10.85□□□□□ -0.67
CD4-201ENST00000011653 ZCCHC9Q8N567 271 aaKnown RBP10.85□□□□□ -0.67
CD4-201ENST00000011653 NIPA2Q8N8Q9 360 aa10.85□□□□□ -0.67
CD4-201ENST00000011653 AGAP11Q8TF27 550 aa10.85□□□□□ -0.67
CD4-201ENST00000011653 RBM41Q96IZ5 413 aaKnown RBP10.85□□□□□ -0.67
CD4-201ENST00000011653 SMG9Q9H0W8 520 aaKnown RBP10.85□□□□□ -0.67
CD4-201ENST00000011653 ATXN3LQ9H3M9 355 aa10.85□□□□□ -0.67
CD4-201ENST00000011653 NOP53Q9NZM5 478 aaKnown RBP10.85□□□□□ -0.67
CD4-201ENST00000011653 MARCH2Q9P0N8 246 aa10.85□□□□□ -0.67
CD4-201ENST00000011653 HSFX4A0A1B0GTS1 333 aaPredicted RBP10.84□□□□□ -0.67
CD4-201ENST00000011653 EXOC1LA0A1B0GW35 172 aa10.84□□□□□ -0.67
CD4-201ENST00000011653 HSFX3A0A1B0GWH4 333 aaPredicted RBP10.84□□□□□ -0.67
CD4-201ENST00000011653 A0A1W2PRU2 124 aa10.84□□□□□ -0.67
CD4-201ENST00000011653 EPOPA6NHQ4 379 aa10.84□□□□□ -0.67
CD4-201ENST00000011653 I6L893 689 aaPredicted RBP10.84□□□□□ -0.67
CD4-201ENST00000011653 RTN3O95197 1032 aaPredicted RBP10.84□□□□□ -0.67
CD4-201ENST00000011653 SKIV2L2P42285 1042 aaKnown RBP10.84□□□□□ -0.67
CD4-201ENST00000011653 PTPN9P43378 593 aa10.84□□□□□ -0.67
CD4-201ENST00000011653 NRIP1P48552 1158 aa10.84□□□□□ -0.67
CD4-201ENST00000011653 KCNQ1P51787 676 aa10.84□□□□□ -0.67
CD4-201ENST00000011653 P3H1Q32P28 736 aa10.84□□□□□ -0.67
CD4-201ENST00000011653 TFDP3Q5H9I0 405 aa10.84□□□□□ -0.67
CD4-201ENST00000011653 EFHC2Q5JST6 749 aa10.84□□□□□ -0.67
CD4-201ENST00000011653 STXBP5Q5T5C0 1151 aa10.84□□□□□ -0.67
CD4-201ENST00000011653 TLDC1Q6P9B6 456 aa10.84□□□□□ -0.67
CD4-201ENST00000011653 TMC5Q6UXY8 1006 aa10.84□□□□□ -0.67
CD4-201ENST00000011653 KIF2BQ8N4N8 673 aa10.84□□□□□ -0.67
CD4-201ENST00000011653 MAB21L3Q8N8X9 362 aa10.84□□□□□ -0.67
CD4-201ENST00000011653 RMDN2Q96LZ7 410 aa10.84□□□□□ -0.67
CD4-201ENST00000011653 KCTD15Q96SI1 283 aaPredicted RBP10.84□□□□□ -0.67
CD4-201ENST00000011653 PAIP2Q9BPZ3 127 aaKnown RBP10.84□□□□□ -0.67
CD4-201ENST00000011653 PITPNM3Q9BZ71 974 aa10.84□□□□□ -0.67
CD4-201ENST00000011653 PCDH18Q9HCL0 1135 aa10.84□□□□□ -0.67
CD4-201ENST00000011653 ZNF334Q9HCZ1 680 aaPredicted RBP10.84□□□□□ -0.67
CD4-201ENST00000011653 MAN1C1Q9NR34 630 aa10.84□□□□□ -0.67
CD4-201ENST00000011653 ARHGEF3Q9NR81 526 aa10.84□□□□□ -0.67
CD4-201ENST00000011653 NUP205Q92621 2012 aa10.84□□□□□ -0.67
CD4-201ENST00000011653 EFEMP2O95967 443 aa10.84□□□□□ -0.67
CD4-201ENST00000011653 KRT16P08779 473 aa10.84□□□□□ -0.67
CD4-201ENST00000011653 RPSAP08865 295 aaKnown RBP10.84□□□□□ -0.67
CD4-201ENST00000011653 TAC1P20366 129 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms