RNA–Protein interactions for RNA: ENSMUST00000113707.8

Tpm1-216, Transcript of Tropomyosin alpha-1 chain, mousemouse

TSL 1 (best) BASIC

Gene Tpm1, Length 1,898 nt, Biotype protein coding, Subcellular localisation Axon .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1-216ENSMUST00000113707 Efcab14Q8BGQ6 484 aa26.43■■□□□ 1.82
Tpm1-216ENSMUST00000113707 Il17reQ8BH06 637 aa26.43■■□□□ 1.82
Tpm1-216ENSMUST00000113707 Tmem30aQ8VEK0 364 aa26.43■■□□□ 1.82
Tpm1-216ENSMUST00000113707 Pcdhb11Q91UZ8 797 aa26.43■■□□□ 1.82
Tpm1-216ENSMUST00000113707 Znf622Q91VY9 476 aa26.43■■□□□ 1.82
Tpm1-216ENSMUST00000113707 Ola1Q9CZ30 396 aaKnown RBP26.43■■□□□ 1.82
Tpm1-216ENSMUST00000113707 MajinQ9D992 256 aa26.43■■□□□ 1.82
Tpm1-216ENSMUST00000113707 Mpp2Q9WV34 552 aa26.43■■□□□ 1.82
Tpm1-216ENSMUST00000113707 Tle2Q9WVB2 767 aa26.43■■□□□ 1.82
Tpm1-216ENSMUST00000113707 PtprfA2A8L5 1898 aa26.43■■□□□ 1.82
Tpm1-216ENSMUST00000113707 P01878 344 aa26.42■■□□□ 1.82
Tpm1-216ENSMUST00000113707 Mcpt4P21812 246 aa26.42■■□□□ 1.82
Tpm1-216ENSMUST00000113707 PorP37040 678 aa26.42■■□□□ 1.82
Tpm1-216ENSMUST00000113707 AxlQ00993 888 aa26.42■■□□□ 1.82
Tpm1-216ENSMUST00000113707 Fam107bQ3TGF2 131 aa26.42■■□□□ 1.82
Tpm1-216ENSMUST00000113707 B020004J07RikQ3UTC0 476 aa26.42■■□□□ 1.82
Tpm1-216ENSMUST00000113707 Fam81aQ3UXZ6 364 aa26.42■■□□□ 1.82
Tpm1-216ENSMUST00000113707 Zdhhc18Q5Y5T2 380 aa26.42■■□□□ 1.82
Tpm1-216ENSMUST00000113707 Podnl1Q6P3Y9 559 aa26.42■■□□□ 1.82
Tpm1-216ENSMUST00000113707 Igsf3Q6ZQA6 1194 aa26.42■■□□□ 1.82
Tpm1-216ENSMUST00000113707 Rfx6Q8C7R7 927 aa26.42■■□□□ 1.82
Tpm1-216ENSMUST00000113707 Scara3Q8C850 606 aa26.42■■□□□ 1.82
Tpm1-216ENSMUST00000113707 Taf10Q8K0H5 218 aa26.42■■□□□ 1.82
Tpm1-216ENSMUST00000113707 Znrf4Q9DAH2 327 aa26.42■■□□□ 1.82
Tpm1-216ENSMUST00000113707 Ighv11-2A0A075B5R8 117 aa26.42■■□□□ 1.82
Tpm1-216ENSMUST00000113707 Lonrf2B2RT44 518 aa26.42■■□□□ 1.82
Tpm1-216ENSMUST00000113707 Dpy19l3Q71B07 716 aa26.42■■□□□ 1.82
Tpm1-216ENSMUST00000113707 Tas2r115Q7M719 310 aa26.42■■□□□ 1.82
Tpm1-216ENSMUST00000113707 Lrrc19Q8BZT5 364 aa26.42■■□□□ 1.82
Tpm1-216ENSMUST00000113707 Fam151aQ8QZW3 608 aa26.42■■□□□ 1.82
Tpm1-216ENSMUST00000113707 Abhd8Q8R0P8 439 aa26.42■■□□□ 1.82
Tpm1-216ENSMUST00000113707 Sgpl1Q8R0X7 568 aa26.42■■□□□ 1.82
Tpm1-216ENSMUST00000113707 Ndufa10Q99LC3 355 aaKnown RBP26.42■■□□□ 1.82
Tpm1-216ENSMUST00000113707 Clp1Q99LI9 425 aa26.42■■□□□ 1.82
Tpm1-216ENSMUST00000113707 Rpl9-ps6A0A140T8T4 192 aa26.41■■□□□ 1.82
Tpm1-216ENSMUST00000113707 Kctd18E0CZ26 429 aa26.41■■□□□ 1.82
Tpm1-216ENSMUST00000113707 Gm3642K7N6V4 267 aa26.41■■□□□ 1.82
Tpm1-216ENSMUST00000113707 P01631 113 aa26.41■■□□□ 1.82
Tpm1-216ENSMUST00000113707 Rpl9P51410 192 aaKnown RBP26.41■■□□□ 1.82
Tpm1-216ENSMUST00000113707 Btbd1P58544 488 aa26.41■■□□□ 1.82
Tpm1-216ENSMUST00000113707 Pkn1P70268 946 aa26.41■■□□□ 1.82
Tpm1-216ENSMUST00000113707 Tespa1Q3U132 458 aa26.41■■□□□ 1.82
Tpm1-216ENSMUST00000113707 Crtc1Q68ED7 630 aa26.41■■□□□ 1.82
Tpm1-216ENSMUST00000113707 Wdr44Q6NVE8 915 aa26.41■■□□□ 1.82
Tpm1-216ENSMUST00000113707 Zfp454Q80Y34 536 aa26.41■■□□□ 1.82
Tpm1-216ENSMUST00000113707 HpdlQ8K248 371 aa26.41■■□□□ 1.82
Tpm1-216ENSMUST00000113707 Sike1Q9CPR7 207 aa26.41■■□□□ 1.82
Tpm1-216ENSMUST00000113707 Mpp5Q9JLB2 675 aa26.41■■□□□ 1.82
Tpm1-216ENSMUST00000113707 Tnfrsf14A0A1W2P7D5 276 aa26.4■■□□□ 1.82
Tpm1-216ENSMUST00000113707 Spin2fJ3QPU0 254 aa26.4■■□□□ 1.82
Tpm1-216ENSMUST00000113707 Rpl21O09167 160 aaKnown RBP26.4■■□□□ 1.82
Tpm1-216ENSMUST00000113707 P01648 108 aa26.4■■□□□ 1.82
Tpm1-216ENSMUST00000113707 Itgb1P09055 798 aaKnown RBP26.4■■□□□ 1.82
Tpm1-216ENSMUST00000113707 TubP50586 505 aa26.4■■□□□ 1.82
Tpm1-216ENSMUST00000113707 Sec1P97353 368 aa26.4■■□□□ 1.82
Tpm1-216ENSMUST00000113707 Tmem82Q8R115 356 aa26.4■■□□□ 1.82
Tpm1-216ENSMUST00000113707 Olfr345Q8VGK4 311 aa26.4■■□□□ 1.82
Tpm1-216ENSMUST00000113707 Nudt8Q9CR24 210 aa26.4■■□□□ 1.82
Tpm1-216ENSMUST00000113707 Nme3Q9WV85 169 aa26.4■■□□□ 1.82
Tpm1-216ENSMUST00000113707 Alpk2Q91ZB0 2144 aa26.4■■□□□ 1.82
Tpm1-216ENSMUST00000113707 Obsl1D3YYU8 1804 aaKnown RBP26.4■■□□□ 1.82
Tpm1-216ENSMUST00000113707 Igkv17-121A0A0G2JFA8 117 aa26.4■■□□□ 1.82
Tpm1-216ENSMUST00000113707 Cep85lA0A1W2P884 806 aa26.4■■□□□ 1.82
Tpm1-216ENSMUST00000113707 Bclaf3A2AG58 752 aaKnown RBP26.4■■□□□ 1.82
Tpm1-216ENSMUST00000113707 Rap1gds1E9Q912 607 aa26.4■■□□□ 1.82
Tpm1-216ENSMUST00000113707 Gm14496K7N5U4 849 aa26.4■■□□□ 1.82
Tpm1-216ENSMUST00000113707 MipP51180 263 aa26.4■■□□□ 1.82
Tpm1-216ENSMUST00000113707 Parp3Q3ULW8 533 aa26.4■■□□□ 1.82
Tpm1-216ENSMUST00000113707 Grm5Q3UVX5 1203 aa26.4■■□□□ 1.82
Tpm1-216ENSMUST00000113707 Gga2Q6P5E6 603 aa26.4■■□□□ 1.82
Tpm1-216ENSMUST00000113707 Ccdc40Q8BI79 1192 aa26.4■■□□□ 1.82
Tpm1-216ENSMUST00000113707 Ifi205aQ8CGE8 404 aa26.4■■□□□ 1.82
Tpm1-216ENSMUST00000113707 Ces2aQ8QZR3 558 aa26.4■■□□□ 1.82
Tpm1-216ENSMUST00000113707 Vps37bQ8R0J7 285 aa26.4■■□□□ 1.82
Tpm1-216ENSMUST00000113707 Lrrc14Q8VC16 493 aa26.4■■□□□ 1.82
Tpm1-216ENSMUST00000113707 Tmem161aQ8VCA6 480 aa26.4■■□□□ 1.82
Tpm1-216ENSMUST00000113707 Trim66Q924W6 1242 aa26.4■■□□□ 1.82
Tpm1-216ENSMUST00000113707 Kif12Q9D2Z8 642 aa26.4■■□□□ 1.82
Tpm1-216ENSMUST00000113707 Dnajb2Q9QYI5 324 aa26.4■■□□□ 1.82
Tpm1-216ENSMUST00000113707 Fgf10O35565 209 aa26.39■■□□□ 1.82
Tpm1-216ENSMUST00000113707 Cd2P08920 344 aa26.39■■□□□ 1.82
Tpm1-216ENSMUST00000113707 Wnt3aP27467 352 aa26.39■■□□□ 1.82
Tpm1-216ENSMUST00000113707 Timm13P62075 95 aa26.39■■□□□ 1.82
Tpm1-216ENSMUST00000113707 Trim43bP86448 445 aa26.39■■□□□ 1.82
Tpm1-216ENSMUST00000113707 InhbaQ04998 424 aa26.39■■□□□ 1.82
Tpm1-216ENSMUST00000113707 Zbtb48Q1H9T6 681 aa26.39■■□□□ 1.82
Tpm1-216ENSMUST00000113707 Gbp4Q61107 620 aa26.39■■□□□ 1.82
Tpm1-216ENSMUST00000113707 Uts2bQ765I1 113 aa26.39■■□□□ 1.82
Tpm1-216ENSMUST00000113707 Defb34Q7TNV8 81 aa26.39■■□□□ 1.82
Tpm1-216ENSMUST00000113707 Ankzf1Q80UU1 748 aaKnown RBP26.39■■□□□ 1.82
Tpm1-216ENSMUST00000113707 Tmtc3Q8BRH0 920 aa26.39■■□□□ 1.82
Tpm1-216ENSMUST00000113707 BoraQ8BS90 525 aa26.39■■□□□ 1.82
Tpm1-216ENSMUST00000113707 KynuQ9CXF0 464 aa26.39■■□□□ 1.82
Tpm1-216ENSMUST00000113707 QpctQ9CYK2 362 aa26.39■■□□□ 1.82
Tpm1-216ENSMUST00000113707 ArskQ9D2L1 553 aa26.39■■□□□ 1.82
Tpm1-216ENSMUST00000113707 LrgukQ9D5S7 820 aa26.39■■□□□ 1.82
Tpm1-216ENSMUST00000113707 TheglQ9DA15 459 aa26.39■■□□□ 1.82
Tpm1-216ENSMUST00000113707 MrgbpQ9DAT2 204 aa26.39■■□□□ 1.82
Tpm1-216ENSMUST00000113707 NckipsdQ9ESJ4 714 aa26.39■■□□□ 1.82
Tpm1-216ENSMUST00000113707 Tnfaip1O70479 316 aa26.38■■□□□ 1.81
Retrieved 100 of 22,080 RNA–protein pairs in 23.9 ms