RNA–Protein interactions for RNA: ENSMUST00000080860.12

Ccdc28a-202, Transcript of Coiled-coil domain-containing 28A, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc28a, Length 1,190 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28a-202ENSMUST00000080860 Mcur1Q9CXD6 340 aa12.51□□□□□ -0.41
Ccdc28a-202ENSMUST00000080860 Q9D5Y0 588 aa12.51□□□□□ -0.41
Ccdc28a-202ENSMUST00000080860 Ccdc91Q9D8L5 442 aa12.51□□□□□ -0.41
Ccdc28a-202ENSMUST00000080860 SrpraQ9DBG7 636 aaKnown RBP12.51□□□□□ -0.41
Ccdc28a-202ENSMUST00000080860 Ppm1dQ9QZ67 598 aa12.51□□□□□ -0.41
Ccdc28a-202ENSMUST00000080860 Pex11bQ9Z210 259 aa12.51□□□□□ -0.41
Ccdc28a-202ENSMUST00000080860 Gria3Q9Z2W9 888 aa12.51□□□□□ -0.41
Ccdc28a-202ENSMUST00000080860 KalrnA2CG49 2964 aa12.51□□□□□ -0.41
Ccdc28a-202ENSMUST00000080860 FrylF8VQ05 3007 aa12.5□□□□□ -0.41
Ccdc28a-202ENSMUST00000080860 Aldoart1A6ZI46 419 aa12.5□□□□□ -0.41
Ccdc28a-202ENSMUST00000080860 Gm6685D3YYP3 228 aa12.5□□□□□ -0.41
Ccdc28a-202ENSMUST00000080860 Gm20671F6TVX7 576 aa12.5□□□□□ -0.41
Ccdc28a-202ENSMUST00000080860 5730507C01RikJ3QPX0 416 aa12.5□□□□□ -0.41
Ccdc28a-202ENSMUST00000080860 Vmn2r67K7N6T2 851 aa12.5□□□□□ -0.41
Ccdc28a-202ENSMUST00000080860 Sypl1O09117 261 aa12.5□□□□□ -0.41
Ccdc28a-202ENSMUST00000080860 Cavin1O54724 392 aa12.5□□□□□ -0.41
Ccdc28a-202ENSMUST00000080860 Prkag1O54950 330 aa12.5□□□□□ -0.41
Ccdc28a-202ENSMUST00000080860 Cr2P19070 1025 aa12.5□□□□□ -0.41
Ccdc28a-202ENSMUST00000080860 Zfy2P20662 777 aa12.5□□□□□ -0.41
Ccdc28a-202ENSMUST00000080860 PrkchP23298 683 aa12.5□□□□□ -0.41
Ccdc28a-202ENSMUST00000080860 CskP41241 450 aa12.5□□□□□ -0.41
Ccdc28a-202ENSMUST00000080860 Hnrnpa1P49312 320 aaKnown RBP12.5□□□□□ -0.41
Ccdc28a-202ENSMUST00000080860 Atp5bP56480 529 aaKnown RBP12.5□□□□□ -0.41
Ccdc28a-202ENSMUST00000080860 CstaP56567 97 aa12.5□□□□□ -0.41
Ccdc28a-202ENSMUST00000080860 SmoP56726 793 aa12.5□□□□□ -0.41
Ccdc28a-202ENSMUST00000080860 Npy2rP97295 381 aa12.5□□□□□ -0.41
Ccdc28a-202ENSMUST00000080860 Zmym5Q3U2E2 627 aa12.5□□□□□ -0.41
Ccdc28a-202ENSMUST00000080860 Gm29609Q3UU56 907 aa12.5□□□□□ -0.41
Ccdc28a-202ENSMUST00000080860 Pla2g4dQ50L43 825 aa12.5□□□□□ -0.41
Ccdc28a-202ENSMUST00000080860 Tmem255bQ5FW56 369 aa12.5□□□□□ -0.41
Ccdc28a-202ENSMUST00000080860 CtcfQ61164 736 aaKnown RBP12.5□□□□□ -0.41
Ccdc28a-202ENSMUST00000080860 Q6PD19 689 aa12.5□□□□□ -0.41
Ccdc28a-202ENSMUST00000080860 Gpr151Q7TSN6 422 aa12.5□□□□□ -0.41
Ccdc28a-202ENSMUST00000080860 Gpt2Q8BGT5 522 aa12.5□□□□□ -0.41
Ccdc28a-202ENSMUST00000080860 Cox15Q8BJ03 413 aa12.5□□□□□ -0.41
Ccdc28a-202ENSMUST00000080860 Gtf3c2Q8BL74 907 aa12.5□□□□□ -0.41
Ccdc28a-202ENSMUST00000080860 Frs2Q8C180 508 aa12.5□□□□□ -0.41
Ccdc28a-202ENSMUST00000080860 PvrQ8K094 408 aa12.5□□□□□ -0.41
Ccdc28a-202ENSMUST00000080860 RtbdnQ8QZY4 247 aa12.5□□□□□ -0.41
Ccdc28a-202ENSMUST00000080860 Wdr98Q8VC42 657 aa12.5□□□□□ -0.41
Ccdc28a-202ENSMUST00000080860 Olfr847Q8VFF4 312 aa12.5□□□□□ -0.41
Ccdc28a-202ENSMUST00000080860 Mat1aQ91X83 396 aaKnown RBP12.5□□□□□ -0.41
Ccdc28a-202ENSMUST00000080860 Aco2Q99KI0 780 aaKnown RBP12.5□□□□□ -0.41
Ccdc28a-202ENSMUST00000080860 Mrps33Q9D2R8 106 aa12.5□□□□□ -0.41
Ccdc28a-202ENSMUST00000080860 Sertad3Q9ERC3 197 aa12.5□□□□□ -0.41
Ccdc28a-202ENSMUST00000080860 Nfu1Q9QZ23 255 aa12.5□□□□□ -0.41
Ccdc28a-202ENSMUST00000080860 Adgrf5G5E8Q8 1348 aa12.5□□□□□ -0.41
Ccdc28a-202ENSMUST00000080860 Cnot1Q6ZQ08 2375 aaKnown RBP12.49□□□□□ -0.41
Ccdc28a-202ENSMUST00000080860 Akain1G3UWD5 69 aa12.49□□□□□ -0.41
Ccdc28a-202ENSMUST00000080860 Srsf5O35326 269 aaKnown RBP12.49□□□□□ -0.41
Ccdc28a-202ENSMUST00000080860 Atp2a2O55143 1044 aaKnown RBP12.49□□□□□ -0.41
Ccdc28a-202ENSMUST00000080860 Birc5O70201 140 aa12.49□□□□□ -0.41
Ccdc28a-202ENSMUST00000080860 Tpp1O89023 562 aa12.49□□□□□ -0.41
Ccdc28a-202ENSMUST00000080860 PrlP06879 226 aa12.49□□□□□ -0.41
Ccdc28a-202ENSMUST00000080860 F9P16294 471 aa12.49□□□□□ -0.41
Ccdc28a-202ENSMUST00000080860 Sesn2P58043 480 aa12.49□□□□□ -0.41
Ccdc28a-202ENSMUST00000080860 Psmb7P70195 277 aa12.49□□□□□ -0.41
Ccdc28a-202ENSMUST00000080860 Bach2P97303 839 aa12.49□□□□□ -0.41
Ccdc28a-202ENSMUST00000080860 St3gal2Q11204 350 aa12.49□□□□□ -0.41
Ccdc28a-202ENSMUST00000080860 Tespa1Q3U132 458 aa12.49□□□□□ -0.41
Ccdc28a-202ENSMUST00000080860 Prickle1Q3U5C7 832 aa12.49□□□□□ -0.41
Ccdc28a-202ENSMUST00000080860 Sim2Q61079 657 aa12.49□□□□□ -0.41
Ccdc28a-202ENSMUST00000080860 Tfap2bQ61313 459 aa12.49□□□□□ -0.41
Ccdc28a-202ENSMUST00000080860 Mettl25Q6NXH8 597 aa12.49□□□□□ -0.41
Ccdc28a-202ENSMUST00000080860 Tha1Q6XPS7 400 aa12.49□□□□□ -0.41
Ccdc28a-202ENSMUST00000080860 HpseQ6YGZ1 535 aa12.49□□□□□ -0.41
Ccdc28a-202ENSMUST00000080860 Abcg2Q7TMS5 657 aa12.49□□□□□ -0.41
Ccdc28a-202ENSMUST00000080860 Gabbr2Q80T41 940 aa12.49□□□□□ -0.41
Ccdc28a-202ENSMUST00000080860 Nucks1Q80XU3 234 aaKnown RBP12.49□□□□□ -0.41
Ccdc28a-202ENSMUST00000080860 Camta2Q80Y50 1208 aa12.49□□□□□ -0.41
Ccdc28a-202ENSMUST00000080860 Iars2Q8BIJ6 1012 aa12.49□□□□□ -0.41
Ccdc28a-202ENSMUST00000080860 Dars2Q8BIP0 653 aa12.49□□□□□ -0.41
Ccdc28a-202ENSMUST00000080860 Psmd5Q8BJY1 504 aa12.49□□□□□ -0.41
Ccdc28a-202ENSMUST00000080860 Cyp2d26Q8CIM7 500 aa12.49□□□□□ -0.41
Ccdc28a-202ENSMUST00000080860 Sh2d5Q8JZW5 429 aa12.49□□□□□ -0.41
Ccdc28a-202ENSMUST00000080860 Znf131Q8K3J5 619 aa12.49□□□□□ -0.41
Ccdc28a-202ENSMUST00000080860 Apbb3Q8R1C9 486 aa12.49□□□□□ -0.41
Ccdc28a-202ENSMUST00000080860 Zfp617Q91WM0 559 aa12.49□□□□□ -0.41
Ccdc28a-202ENSMUST00000080860 Arhgef3Q91X46 524 aa12.49□□□□□ -0.41
Ccdc28a-202ENSMUST00000080860 Tc2nQ91XT6 489 aa12.49□□□□□ -0.41
Ccdc28a-202ENSMUST00000080860 Vangl2Q91ZD4 521 aa12.49□□□□□ -0.41
Ccdc28a-202ENSMUST00000080860 Xpo6Q924Z6 1125 aa12.49□□□□□ -0.41
Ccdc28a-202ENSMUST00000080860 Gps1Q99LD4 471 aaKnown RBP12.49□□□□□ -0.41
Ccdc28a-202ENSMUST00000080860 Nol7Q9D7Z3 254 aaKnown RBP12.49□□□□□ -0.41
Ccdc28a-202ENSMUST00000080860 Il1rl2Q9ERS7 574 aa12.49□□□□□ -0.41
Ccdc28a-202ENSMUST00000080860 Utp3Q9JI13 469 aaKnown RBP12.49□□□□□ -0.41
Ccdc28a-202ENSMUST00000080860 Iqcj-Schip1A0A088MLT8 559 aa12.48□□□□□ -0.41
Ccdc28a-202ENSMUST00000080860 Col9a3A2ACT7 680 aa12.48□□□□□ -0.41
Ccdc28a-202ENSMUST00000080860 Tcte1A6H639 498 aa12.48□□□□□ -0.41
Ccdc28a-202ENSMUST00000080860 Bard1O70445 765 aa12.48□□□□□ -0.41
Ccdc28a-202ENSMUST00000080860 Ifnb1P01575 182 aa12.48□□□□□ -0.41
Ccdc28a-202ENSMUST00000080860 Wipf3P0C7L0 485 aa12.48□□□□□ -0.41
Ccdc28a-202ENSMUST00000080860 Schip1P0DPB4 484 aa12.48□□□□□ -0.41
Ccdc28a-202ENSMUST00000080860 PolP11369 1281 aa12.48□□□□□ -0.41
Ccdc28a-202ENSMUST00000080860 Slc11a1P41251 548 aa12.48□□□□□ -0.41
Ccdc28a-202ENSMUST00000080860 Il12bP43432 335 aa12.48□□□□□ -0.41
Ccdc28a-202ENSMUST00000080860 Mapkapk2P49138 386 aa12.48□□□□□ -0.41
Ccdc28a-202ENSMUST00000080860 Cuzd1P70412 606 aa12.48□□□□□ -0.41
Ccdc28a-202ENSMUST00000080860 Csrp2P97314 193 aaKnown RBP12.48□□□□□ -0.41
Ccdc28a-202ENSMUST00000080860 Fam172aQ3TNH5 417 aa12.48□□□□□ -0.41
Retrieved 100 of 22,080 RNA–protein pairs in 28.4 ms