RNA–Protein interactions for RNA: ENSMUST00000076265.12

Upf3b-201, Transcript of UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Upf3b, Length 2,344 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3b-201ENSMUST00000076265 Gdi2Q61598 445 aaKnown RBP9.32□□□□□ -0.92
Upf3b-201ENSMUST00000076265 Atg9bQ6EBV9 922 aa9.32□□□□□ -0.92
Upf3b-201ENSMUST00000076265 Usp49Q6P9L4 685 aa9.32□□□□□ -0.92
Upf3b-201ENSMUST00000076265 Ano5Q75UR0 904 aa9.32□□□□□ -0.92
Upf3b-201ENSMUST00000076265 Ush1gQ80T11 461 aa9.32□□□□□ -0.92
Upf3b-201ENSMUST00000076265 Zfp454Q80Y34 536 aa9.32□□□□□ -0.92
Upf3b-201ENSMUST00000076265 Pdk1Q8BFP9 434 aaKnown RBP9.32□□□□□ -0.92
Upf3b-201ENSMUST00000076265 Nceh1Q8BLF1 408 aaKnown RBP9.32□□□□□ -0.92
Upf3b-201ENSMUST00000076265 Camk1dQ8BW96 385 aa9.32□□□□□ -0.92
Upf3b-201ENSMUST00000076265 Klhl30Q8C3F7 581 aa9.32□□□□□ -0.92
Upf3b-201ENSMUST00000076265 Uroc1Q8VC12 676 aa9.32□□□□□ -0.92
Upf3b-201ENSMUST00000076265 Masp2Q91WP0 685 aa9.32□□□□□ -0.92
Upf3b-201ENSMUST00000076265 Pcdhb5Q91XZ5 792 aa9.32□□□□□ -0.92
Upf3b-201ENSMUST00000076265 Uckl1Q91YL3 548 aa9.32□□□□□ -0.92
Upf3b-201ENSMUST00000076265 SmtnQ921U8 923 aa9.32□□□□□ -0.92
Upf3b-201ENSMUST00000076265 Syvn1Q9DBY1 612 aa9.32□□□□□ -0.92
Upf3b-201ENSMUST00000076265 Nrip2Q9JHR9 270 aa9.32□□□□□ -0.92
Upf3b-201ENSMUST00000076265 Cyp46a1Q9WVK8 500 aa9.32□□□□□ -0.92
Upf3b-201ENSMUST00000076265 Htatip2Q9Z2G9 242 aa9.32□□□□□ -0.92
Upf3b-201ENSMUST00000076265 Mzf1S4R1L6 814 aa9.32□□□□□ -0.92
Upf3b-201ENSMUST00000076265 Syngap1F6SEU4 1340 aa9.31□□□□□ -0.92
Upf3b-201ENSMUST00000076265 A0A286YCQ8 80 aa9.31□□□□□ -0.92
Upf3b-201ENSMUST00000076265 Olfr1095A3KPP7 308 aa9.31□□□□□ -0.92
Upf3b-201ENSMUST00000076265 Olfr610E9Q598 315 aa9.31□□□□□ -0.92
Upf3b-201ENSMUST00000076265 1600015I10RikE9Q745 711 aa9.31□□□□□ -0.92
Upf3b-201ENSMUST00000076265 Vmn2r53L7N473 806 aa9.31□□□□□ -0.92
Upf3b-201ENSMUST00000076265 Dmp1O55188 503 aa9.31□□□□□ -0.92
Upf3b-201ENSMUST00000076265 Ncf2O70145 525 aa9.31□□□□□ -0.92
Upf3b-201ENSMUST00000076265 Chrnb1P09690 501 aa9.31□□□□□ -0.92
Upf3b-201ENSMUST00000076265 U2af2P26369 475 aaKnown RBP9.31□□□□□ -0.92
Upf3b-201ENSMUST00000076265 Gabrb2P63137 512 aa9.31□□□□□ -0.92
Upf3b-201ENSMUST00000076265 Tbx4P70325 552 aa9.31□□□□□ -0.92
Upf3b-201ENSMUST00000076265 Tubg1P83887 451 aaKnown RBP9.31□□□□□ -0.92
Upf3b-201ENSMUST00000076265 Gbp1Q01514 589 aa9.31□□□□□ -0.92
Upf3b-201ENSMUST00000076265 Hoxd1Q01822 328 aa9.31□□□□□ -0.92
Upf3b-201ENSMUST00000076265 Lmf1Q3U3R4 574 aa9.31□□□□□ -0.92
Upf3b-201ENSMUST00000076265 Cyp7b1Q60991 507 aa9.31□□□□□ -0.92
Upf3b-201ENSMUST00000076265 Slc26a2Q62273 739 aa9.31□□□□□ -0.92
Upf3b-201ENSMUST00000076265 Krt73Q6NXH9 539 aa9.31□□□□□ -0.92
Upf3b-201ENSMUST00000076265 Ankle2Q6P1H6 964 aa9.31□□□□□ -0.92
Upf3b-201ENSMUST00000076265 Scaf4Q6PFF0 1209 aaKnown RBP9.31□□□□□ -0.92
Upf3b-201ENSMUST00000076265 Hsdl1Q8BTX9 330 aa9.31□□□□□ -0.92
Upf3b-201ENSMUST00000076265 Pithd1Q8BWR2 211 aa9.31□□□□□ -0.92
Upf3b-201ENSMUST00000076265 Pgm5Q8BZF8 567 aa9.31□□□□□ -0.92
Upf3b-201ENSMUST00000076265 Anapc2Q8BZQ7 837 aa9.31□□□□□ -0.92
Upf3b-201ENSMUST00000076265 Gpr157Q8C206 330 aa9.31□□□□□ -0.92
Upf3b-201ENSMUST00000076265 Bhlhe22Q8C6A8 355 aa9.31□□□□□ -0.92
Upf3b-201ENSMUST00000076265 Gramd1cQ8CI52 457 aa9.31□□□□□ -0.92
Upf3b-201ENSMUST00000076265 Phospho1Q8R2H9 267 aa9.31□□□□□ -0.92
Upf3b-201ENSMUST00000076265 Rbm12Q8R4X3 992 aaKnown RBP9.31□□□□□ -0.92
Upf3b-201ENSMUST00000076265 Olfr108Q8VFA1 320 aa9.31□□□□□ -0.92
Upf3b-201ENSMUST00000076265 Olfr822Q8VFU1 312 aa9.31□□□□□ -0.92
Upf3b-201ENSMUST00000076265 Alpk1Q9CXB8 1231 aa9.31□□□□□ -0.92
Upf3b-201ENSMUST00000076265 Dclk1Q9JLM8 756 aa9.31□□□□□ -0.92
Upf3b-201ENSMUST00000076265 Stap1Q9JM90 297 aaKnown RBP9.31□□□□□ -0.92
Upf3b-201ENSMUST00000076265 Lrrc63A6H694 637 aa9.31□□□□□ -0.92
Upf3b-201ENSMUST00000076265 2010300C02RikE9Q3M9 1175 aa9.31□□□□□ -0.92
Upf3b-201ENSMUST00000076265 Gm45837F7D3W5 961 aa9.31□□□□□ -0.92
Upf3b-201ENSMUST00000076265 Mtatp6P00848 226 aa9.31□□□□□ -0.92
Upf3b-201ENSMUST00000076265 Gja1P23242 382 aa9.31□□□□□ -0.92
Upf3b-201ENSMUST00000076265 Rab21P35282 222 aa9.31□□□□□ -0.92
Upf3b-201ENSMUST00000076265 Alox15P39654 663 aa9.31□□□□□ -0.92
Upf3b-201ENSMUST00000076265 Sec23aQ01405 765 aa9.31□□□□□ -0.92
Upf3b-201ENSMUST00000076265 Acot6Q32Q92 419 aa9.31□□□□□ -0.92
Upf3b-201ENSMUST00000076265 Q3TTJ4 293 aa9.31□□□□□ -0.92
Upf3b-201ENSMUST00000076265 Smcr8Q3UMB5 935 aa9.31□□□□□ -0.92
Upf3b-201ENSMUST00000076265 Xkr7Q5GH64 580 aa9.31□□□□□ -0.92
Upf3b-201ENSMUST00000076265 Tm4sf1Q64302 202 aa9.31□□□□□ -0.92
Upf3b-201ENSMUST00000076265 Ano6Q6P9J9 911 aa9.31□□□□□ -0.92
Upf3b-201ENSMUST00000076265 Olfr857Q7TRF7 309 aa9.31□□□□□ -0.92
Upf3b-201ENSMUST00000076265 Znf516Q7TSH3 1157 aa9.31□□□□□ -0.92
Upf3b-201ENSMUST00000076265 Acad11Q80XL6 779 aa9.31□□□□□ -0.92
Upf3b-201ENSMUST00000076265 Wdtc1Q80ZK9 677 aa9.31□□□□□ -0.92
Upf3b-201ENSMUST00000076265 Creb3l2Q8BH52 521 aa9.31□□□□□ -0.92
Upf3b-201ENSMUST00000076265 Tubgcp5Q8BKN5 1024 aa9.31□□□□□ -0.92
Upf3b-201ENSMUST00000076265 Thoc5Q8BKT7 683 aaKnown RBP9.31□□□□□ -0.92
Upf3b-201ENSMUST00000076265 SheQ8BSD5 492 aa9.31□□□□□ -0.92
Upf3b-201ENSMUST00000076265 Grsf1Q8C5Q4 479 aaKnown RBP9.31□□□□□ -0.92
Upf3b-201ENSMUST00000076265 Nrip1Q8CBD1 1161 aa9.31□□□□□ -0.92
Upf3b-201ENSMUST00000076265 Adam4Q8CGQ2 763 aa9.31□□□□□ -0.92
Upf3b-201ENSMUST00000076265 Pspc1Q8R326 523 aaKnown RBP9.31□□□□□ -0.92
Upf3b-201ENSMUST00000076265 Olfr821Q8VG45 310 aa9.31□□□□□ -0.92
Upf3b-201ENSMUST00000076265 FdpsQ920E5 353 aa9.31□□□□□ -0.92
Upf3b-201ENSMUST00000076265 Pde2aQ922S4 916 aa9.31□□□□□ -0.92
Upf3b-201ENSMUST00000076265 Oxld1Q9CR10 201 aa9.31□□□□□ -0.92
Upf3b-201ENSMUST00000076265 Kcnk5Q9JK62 502 aa9.31□□□□□ -0.92
Upf3b-201ENSMUST00000076265 D17h6s53eQ9Z1R4 293 aa9.31□□□□□ -0.92
Upf3b-201ENSMUST00000076265 Coq10aE9Q3H6 259 aa9.3□□□□□ -0.92
Upf3b-201ENSMUST00000076265 Zfp949E9Q732 603 aa9.3□□□□□ -0.92
Upf3b-201ENSMUST00000076265 Vmn2r19G5E8G4 854 aa9.3□□□□□ -0.92
Upf3b-201ENSMUST00000076265 Gm379J3QQ19 296 aa9.3□□□□□ -0.92
Upf3b-201ENSMUST00000076265 Plin2P43883 425 aa9.3□□□□□ -0.92
Upf3b-201ENSMUST00000076265 Nlrp1aQ2LKU9 1182 aa9.3□□□□□ -0.92
Upf3b-201ENSMUST00000076265 Tatdn3Q3U1C6 294 aa9.3□□□□□ -0.92
Upf3b-201ENSMUST00000076265 Dab2ipQ3UHC7 1189 aa9.3□□□□□ -0.92
Upf3b-201ENSMUST00000076265 Trim67Q505D9 768 aa9.3□□□□□ -0.92
Upf3b-201ENSMUST00000076265 Mocs1Q5RKZ7 636 aa9.3□□□□□ -0.92
Upf3b-201ENSMUST00000076265 CybbQ61093 570 aa9.3□□□□□ -0.92
Upf3b-201ENSMUST00000076265 Itga7Q61738 1179 aa9.3□□□□□ -0.92
Upf3b-201ENSMUST00000076265 Vat1Q62465 406 aa9.3□□□□□ -0.92
Retrieved 100 of 22,080 RNA–protein pairs in 27.9 ms