RNA–Protein interactions for RNA: ENSMUST00000034776.12

Cln6-201, Transcript of Ceroid-lipofuscinosis, neuronal 6, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Cln6, Length 2,142 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cln6-201ENSMUST00000034776 Spa17Q62252 149 aa23.59■■□□□ 1.37
Cln6-201ENSMUST00000034776 Spata24Q6P926 205 aa23.59■■□□□ 1.37
Cln6-201ENSMUST00000034776 Olfr412Q7TRW7 312 aa23.59■■□□□ 1.37
Cln6-201ENSMUST00000034776 ItpkcQ7TS72 678 aa23.59■■□□□ 1.37
Cln6-201ENSMUST00000034776 Spata7Q80VP2 582 aa23.59■■□□□ 1.37
Cln6-201ENSMUST00000034776 Ttc24Q8BYG0 334 aa23.59■■□□□ 1.37
Cln6-201ENSMUST00000034776 Nlrp4bQ8C6J9 863 aa23.59■■□□□ 1.37
Cln6-201ENSMUST00000034776 Cyp4a12aQ91WL5 508 aa23.59■■□□□ 1.37
Cln6-201ENSMUST00000034776 Mrps18aQ99N85 196 aa23.59■■□□□ 1.37
Cln6-201ENSMUST00000034776 Kdelc1Q9JHP7 502 aa23.59■■□□□ 1.37
Cln6-201ENSMUST00000034776 Baz2bA2AUY4 2123 aa23.59■■□□□ 1.37
Cln6-201ENSMUST00000034776 Bclaf3A2AG58 752 aaKnown RBP23.59■■□□□ 1.37
Cln6-201ENSMUST00000034776 Myl4P09541 193 aaKnown RBP23.59■■□□□ 1.37
Cln6-201ENSMUST00000034776 Zfy1P10925 782 aa23.59■■□□□ 1.37
Cln6-201ENSMUST00000034776 Tubgcp3P58854 905 aa23.59■■□□□ 1.37
Cln6-201ENSMUST00000034776 Grm5Q3UVX5 1203 aa23.59■■□□□ 1.37
Cln6-201ENSMUST00000034776 Msi1Q61474 362 aaKnown RBP23.59■■□□□ 1.37
Cln6-201ENSMUST00000034776 Ccdc68Q8BVC4 333 aa23.59■■□□□ 1.37
Cln6-201ENSMUST00000034776 Zfp449Q8CB76 518 aa23.59■■□□□ 1.37
Cln6-201ENSMUST00000034776 Eml3Q8VC03 897 aa23.59■■□□□ 1.37
Cln6-201ENSMUST00000034776 Nle1Q8VEJ4 485 aa23.59■■□□□ 1.37
Cln6-201ENSMUST00000034776 Bbox1Q924Y0 387 aa23.59■■□□□ 1.37
Cln6-201ENSMUST00000034776 Usp11Q99K46 921 aa23.59■■□□□ 1.37
Cln6-201ENSMUST00000034776 Plod1Q9R0E2 728 aa23.59■■□□□ 1.37
Cln6-201ENSMUST00000034776 Nme3Q9WV85 169 aa23.59■■□□□ 1.37
Cln6-201ENSMUST00000034776 Scgb2b21A0A087WQA9 112 aa23.58■■□□□ 1.37
Cln6-201ENSMUST00000034776 Akain1G3UWD5 69 aa23.58■■□□□ 1.37
Cln6-201ENSMUST00000034776 Myl2P51667 166 aa23.58■■□□□ 1.37
Cln6-201ENSMUST00000034776 E330034G19RikQ3UWX6 351 aa23.58■■□□□ 1.37
Cln6-201ENSMUST00000034776 Gpr65Q61038 337 aa23.58■■□□□ 1.37
Cln6-201ENSMUST00000034776 Olfr1198Q7TR12 308 aa23.58■■□□□ 1.37
Cln6-201ENSMUST00000034776 Ube2q1Q7TSS2 422 aa23.58■■□□□ 1.37
Cln6-201ENSMUST00000034776 C2cd2lQ80X80 706 aa23.58■■□□□ 1.37
Cln6-201ENSMUST00000034776 Exoc3l1Q8BI71 739 aa23.58■■□□□ 1.37
Cln6-201ENSMUST00000034776 Abi1Q8CBW3 481 aa23.58■■□□□ 1.37
Cln6-201ENSMUST00000034776 PygbQ8CI94 843 aaKnown RBP23.58■■□□□ 1.37
Cln6-201ENSMUST00000034776 Dnm1lQ8K1M6 742 aa23.58■■□□□ 1.37
Cln6-201ENSMUST00000034776 Trmt11Q9CWH5 460 aa23.58■■□□□ 1.37
Cln6-201ENSMUST00000034776 Commd8Q9CZG3 183 aa23.58■■□□□ 1.37
Cln6-201ENSMUST00000034776 Olfr1022L7MTT3 315 aa23.57■■□□□ 1.36
Cln6-201ENSMUST00000034776 Eftud2O08810 971 aaKnown RBP23.57■■□□□ 1.36
Cln6-201ENSMUST00000034776 Ap2a1P17426 977 aaKnown RBP23.57■■□□□ 1.36
Cln6-201ENSMUST00000034776 March5Q3KNM2 278 aa23.57■■□□□ 1.36
Cln6-201ENSMUST00000034776 Sult1d1Q3UZZ6 295 aa23.57■■□□□ 1.36
Cln6-201ENSMUST00000034776 SkiQ60698 725 aa23.57■■□□□ 1.36
Cln6-201ENSMUST00000034776 Csnk1g3Q8C4X2 424 aa23.57■■□□□ 1.36
Cln6-201ENSMUST00000034776 Ccdc63Q8CDV6 558 aa23.57■■□□□ 1.36
Cln6-201ENSMUST00000034776 HpdlQ8K248 371 aa23.57■■□□□ 1.36
Cln6-201ENSMUST00000034776 Barhl2Q8VIB5 384 aa23.57■■□□□ 1.36
Cln6-201ENSMUST00000034776 Mrps22Q9CXW2 359 aa23.57■■□□□ 1.36
Cln6-201ENSMUST00000034776 Upf1Q9EPU0 1124 aaKnown RBP23.57■■□□□ 1.36
Cln6-201ENSMUST00000034776 SgshQ9EQ08 502 aa23.57■■□□□ 1.36
Cln6-201ENSMUST00000034776 Itga9B8JK39 1036 aa23.57■■□□□ 1.36
Cln6-201ENSMUST00000034776 C6E9Q6D8 931 aa23.57■■□□□ 1.36
Cln6-201ENSMUST00000034776 Grip2G3XA20 1042 aa23.57■■□□□ 1.36
Cln6-201ENSMUST00000034776 Vmn2r67K7N6T2 851 aa23.57■■□□□ 1.36
Cln6-201ENSMUST00000034776 Cd2P08920 344 aa23.57■■□□□ 1.36
Cln6-201ENSMUST00000034776 Usp46P62069 366 aa23.57■■□□□ 1.36
Cln6-201ENSMUST00000034776 Nomo1Q6GQT9 1214 aaKnown RBP23.57■■□□□ 1.36
Cln6-201ENSMUST00000034776 Phf24Q80TL4 400 aa23.57■■□□□ 1.36
Cln6-201ENSMUST00000034776 Pwp2Q8BU03 919 aaKnown RBP23.57■■□□□ 1.36
Cln6-201ENSMUST00000034776 Robo4Q8C310 1012 aa23.57■■□□□ 1.36
Cln6-201ENSMUST00000034776 Dnajc28Q8VCE1 385 aa23.57■■□□□ 1.36
Cln6-201ENSMUST00000034776 Vmn2r25W4VSP2 855 aa23.57■■□□□ 1.36
Cln6-201ENSMUST00000034776 Klhdc7bA0A286YD60 1263 aa23.56■■□□□ 1.36
Cln6-201ENSMUST00000034776 Vmn2r27D3YUK6 857 aa23.56■■□□□ 1.36
Cln6-201ENSMUST00000034776 Spata31E9QAF0 1014 aa23.56■■□□□ 1.36
Cln6-201ENSMUST00000034776 Gm13128L7MU96 475 aa23.56■■□□□ 1.36
Cln6-201ENSMUST00000034776 Dnase1l3O55070 310 aa23.56■■□□□ 1.36
Cln6-201ENSMUST00000034776 Ptger1P35375 405 aa23.56■■□□□ 1.36
Cln6-201ENSMUST00000034776 Ccdc61Q3UJV1 511 aa23.56■■□□□ 1.36
Cln6-201ENSMUST00000034776 Syce2Q505B8 171 aa23.56■■□□□ 1.36
Cln6-201ENSMUST00000034776 Olfr533Q7TRT7 320 aa23.56■■□□□ 1.36
Cln6-201ENSMUST00000034776 Trpa1Q8BLA8 1125 aa23.56■■□□□ 1.36
Cln6-201ENSMUST00000034776 Lrrc8cQ8R502 803 aa23.56■■□□□ 1.36
Cln6-201ENSMUST00000034776 Agap3Q8VHH5 910 aa23.56■■□□□ 1.36
Cln6-201ENSMUST00000034776 Pcdhb11Q91UZ8 797 aa23.56■■□□□ 1.36
Cln6-201ENSMUST00000034776 Atad1Q9D5T0 361 aa23.56■■□□□ 1.36
Cln6-201ENSMUST00000034776 Dusp6Q9DBB1 381 aa23.56■■□□□ 1.36
Cln6-201ENSMUST00000034776 Adrm1Q9JKV1 407 aa23.56■■□□□ 1.36
Cln6-201ENSMUST00000034776 Gm5415E9PXF3 478 aa23.56■■□□□ 1.36
Cln6-201ENSMUST00000034776 Gm11239E9Q5Z9 360 aa23.56■■□□□ 1.36
Cln6-201ENSMUST00000034776 Gm11237F2Z3W5 360 aa23.56■■□□□ 1.36
Cln6-201ENSMUST00000034776 Gm11238F2Z478 360 aa23.56■■□□□ 1.36
Cln6-201ENSMUST00000034776 PenkP22005 268 aa23.56■■□□□ 1.36
Cln6-201ENSMUST00000034776 Asgr1P34927 284 aa23.56■■□□□ 1.36
Cln6-201ENSMUST00000034776 Pdcd2P46718 343 aa23.56■■□□□ 1.36
Cln6-201ENSMUST00000034776 Gm428Q3UTE2 360 aa23.56■■□□□ 1.36
Cln6-201ENSMUST00000034776 Gdpd5Q640M6 607 aa23.56■■□□□ 1.36
Cln6-201ENSMUST00000034776 Shkbp1Q6P7W2 704 aa23.56■■□□□ 1.36
Cln6-201ENSMUST00000034776 Trpm4Q7TN37 1213 aa23.56■■□□□ 1.36
Cln6-201ENSMUST00000034776 Tmtc3Q8BRH0 920 aa23.56■■□□□ 1.36
Cln6-201ENSMUST00000034776 Asb14Q8C6Y6 587 aa23.56■■□□□ 1.36
Cln6-201ENSMUST00000034776 Dclre1bQ8C7W7 541 aa23.56■■□□□ 1.36
Cln6-201ENSMUST00000034776 Alg9Q8VDI9 611 aa23.56■■□□□ 1.36
Cln6-201ENSMUST00000034776 DdoQ922Z0 341 aa23.56■■□□□ 1.36
Cln6-201ENSMUST00000034776 Fgfr1op2Q9CRA9 253 aa23.56■■□□□ 1.36
Cln6-201ENSMUST00000034776 Pgam1Q9DBJ1 254 aa23.56■■□□□ 1.36
Cln6-201ENSMUST00000034776 Klc4Q9DBS5 619 aa23.56■■□□□ 1.36
Cln6-201ENSMUST00000034776 PllpQ9DCU2 182 aa23.56■■□□□ 1.36
Retrieved 100 of 22,080 RNA–protein pairs in 26.4 ms