RNA–Protein interactions for RNA: ENSMUST00000028728.5

Ubr1-201, Transcript of E3 ubiquitin-protein ligase UBR1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ubr1, Length 7,768 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1-201ENSMUST00000028728 Nup85Q8R480 656 aaKnown RBP10.34□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Asb6Q91ZU1 418 aa10.34□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Gtf2ird2Q99NI3 936 aa10.34□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Adck1Q9D0L4 525 aa10.34□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Kdelc1Q9JHP7 502 aa10.34□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Clcn2Q9R0A1 908 aa10.34□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Adgra2Q91ZV8 1336 aa10.34□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Zfp472B0V2W5 534 aa10.33□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Vmn2r38G3UYA8 861 aa10.33□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Vmn2r33K7N705 861 aa10.33□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Vmn2r44L7N2E1 861 aa10.33□□□□□ -0.76
Ubr1-201ENSMUST00000028728 PrkchP23298 683 aa10.33□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Ndufs6P52503 116 aa10.33□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Ppm1jQ149T7 507 aa10.33□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Trafd1Q3UDK1 580 aa10.33□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Rbm20Q3UQS8 1199 aaKnown RBP10.33□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Fam129aQ3UW53 926 aa10.33□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Fam71bQ5STT6 665 aa10.33□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Slc26a2Q62273 739 aa10.33□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Mapk4Q6P5G0 583 aa10.33□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Olfr392Q7TRX6 312 aa10.33□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Slc9a9Q8BZ00 644 aa10.33□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Epn3Q91W69 636 aa10.33□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Dpy30Q99LT0 99 aa10.33□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Rsph14Q9D3W1 341 aa10.33□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Dlgap1Q9D415 992 aa10.33□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Ogfod1Q3U0K8 545 aa10.33□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Tas2r102Q7M717 329 aa10.33□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Gadl1Q80WP8 550 aa10.33□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Ubash3bQ8BGG7 638 aa10.33□□□□□ -0.76
Ubr1-201ENSMUST00000028728 ScaiQ8C8N2 606 aa10.33□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Q8CC96 669 aa10.33□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Cox10Q8CFY5 443 aa10.33□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Znf445Q8R2V3 986 aa10.33□□□□□ -0.76
Ubr1-201ENSMUST00000028728 FopnlQ9CZS3 174 aa10.33□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Tex44Q9DA60 530 aa10.33□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Ndufs3Q9DCT2 263 aaKnown RBP10.33□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Aff4Q9ESC8 1160 aa10.33□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Ercc6l2Q9JIM3 1537 aa10.33□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Cdh19E9Q3A7 770 aa10.33□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Mdm4O35618 489 aa10.33□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Ptp4a2O70274 167 aa10.33□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Cd44P15379 778 aa10.33□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Phka1P18826 1241 aa10.33□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Gp1bbP56400 206 aa10.33□□□□□ -0.76
Ubr1-201ENSMUST00000028728 KizQ3UXL4 695 aa10.33□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Clip4Q8CI96 704 aa10.33□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Syt12Q920N7 421 aa10.33□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Pwp1Q99LL5 501 aaKnown RBP10.33□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Usp26Q99MX1 835 aa10.33□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Rprd1bQ9CSU0 326 aaKnown RBP10.33□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Syvn1Q9DBY1 612 aa10.33□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Olig1Q9JKN5 260 aa10.33□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Gpc6Q9R087 555 aa10.33□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Sema6aO35464 1031 aa10.33□□□□□ -0.76
Ubr1-201ENSMUST00000028728 PamP97467 979 aa10.33□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Gdpd4Q3TT99 632 aa10.33□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Itga1Q3V3R4 1179 aa10.33□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Cep78Q6IRU7 790 aa10.33□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Skiv2lQ6NZR5 1244 aa10.33□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Polr2eQ80UW8 210 aaKnown RBP10.33□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Tbx10Q810F8 385 aa10.33□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Ifrd2Q9D8U0 441 aa10.33□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Rpn2Q9DBG6 631 aaKnown RBP10.33□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Slc26a3Q9WVC8 757 aa10.33□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Cldn3Q9Z0G9 219 aa10.33□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Gm17175E9Q528 179 aa10.33□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Cyp2j12G3UXT0 502 aa10.33□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Anxa3O35639 323 aa10.33□□□□□ -0.76
Ubr1-201ENSMUST00000028728 FsbpQ8BKE5 299 aa10.33□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Lrrc4cQ8C031 640 aa10.33□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Brat1Q8C3R1 822 aa10.33□□□□□ -0.76
Ubr1-201ENSMUST00000028728 2610042L04RikQ9D073 150 aa10.33□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Q9D3J9 298 aa10.33□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Tmbim4Q9DA39 238 aa10.33□□□□□ -0.76
Ubr1-201ENSMUST00000028728 IcmtQ9EQK7 283 aa10.33□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Rap1gapA2ALS5 663 aa10.33□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Atp8b5A3FIN4 1183 aa10.33□□□□□ -0.76
Ubr1-201ENSMUST00000028728 MntO08789 591 aa10.33□□□□□ -0.76
Ubr1-201ENSMUST00000028728 H2-EaP01904 255 aa10.33□□□□□ -0.76
Ubr1-201ENSMUST00000028728 P04224 255 aa10.33□□□□□ -0.76
Ubr1-201ENSMUST00000028728 DbtP53395 482 aa10.33□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Fads2p1Q0VAX3 487 aa10.33□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Fam83hQ148V8 1209 aa10.33□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Cspg5Q71M36 566 aa10.33□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Thnsl1Q8BH55 747 aa10.33□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Slitrk6Q8C110 840 aa10.33□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Ciapin1Q8WTY4 309 aa10.33□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Ssxb1Q9CPU1 170 aa10.33□□□□□ -0.76
Ubr1-201ENSMUST00000028728 4933425L06RikQ9D3Z8 585 aa10.33□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Mup6A2AV72 179 aa10.32□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Tp53P02340 387 aa10.32□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Kcnj6P48542 425 aa10.32□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Emilin3P59900 758 aa10.32□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Hbs1lQ69ZS7 682 aa10.32□□□□□ -0.76
Ubr1-201ENSMUST00000028728 DaglaQ6WQJ1 1044 aa10.32□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Actr3Q99JY9 418 aaKnown RBP10.32□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Tbx20Q9ES03 445 aa10.32□□□□□ -0.76
Ubr1-201ENSMUST00000028728 VarsQ9Z1Q9 1263 aaKnown RBP10.32□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Slc17a7Q3TXX4 560 aa10.32□□□□□ -0.76
Retrieved 100 of 22,080 RNA–protein pairs in 31.6 ms