RNA–Protein interactions for RNA: ENSMUST00000028580.11

Ccdc34-201, Transcript of Coiled-coil domain-containing protein 34, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc34, Length 2,070 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc34-201ENSMUST00000028580 GarsQ9CZD3 729 aaKnown RBP20.21■□□□□ 0.83
Ccdc34-201ENSMUST00000028580 Serpinb3cA2RSF9 386 aa20.2■□□□□ 0.82
Ccdc34-201ENSMUST00000028580 A930018M24RikB7ZMY3 218 aa20.2■□□□□ 0.82
Ccdc34-201ENSMUST00000028580 Ptchd4B9EKX1 904 aa20.2■□□□□ 0.82
Ccdc34-201ENSMUST00000028580 Mkrn2osD3Z393 217 aa20.2■□□□□ 0.82
Ccdc34-201ENSMUST00000028580 Gm5160F8VPN3 147 aa20.2■□□□□ 0.82
Ccdc34-201ENSMUST00000028580 Ercc2O08811 760 aaKnown RBP20.2■□□□□ 0.82
Ccdc34-201ENSMUST00000028580 Dnmt3cP0DOY1 709 aa20.2■□□□□ 0.82
Ccdc34-201ENSMUST00000028580 Serpinb2P12388 415 aa20.2■□□□□ 0.82
Ccdc34-201ENSMUST00000028580 Ap2a2P17427 938 aaKnown RBP20.2■□□□□ 0.82
Ccdc34-201ENSMUST00000028580 Tubgcp3P58854 905 aa20.2■□□□□ 0.82
Ccdc34-201ENSMUST00000028580 Abce1P61222 599 aaKnown RBP20.2■□□□□ 0.82
Ccdc34-201ENSMUST00000028580 Pfkfb2P70265 519 aa20.2■□□□□ 0.82
Ccdc34-201ENSMUST00000028580 Serpina5P70458 405 aa20.2■□□□□ 0.82
Ccdc34-201ENSMUST00000028580 Ptcd3Q14C51 685 aaKnown RBP20.2■□□□□ 0.82
Ccdc34-201ENSMUST00000028580 Aarsd1Q3THG9 412 aa20.2■□□□□ 0.82
Ccdc34-201ENSMUST00000028580 Fbxw2Q60584 422 aa20.2■□□□□ 0.82
Ccdc34-201ENSMUST00000028580 Bnip1Q6QD59 228 aa20.2■□□□□ 0.82
Ccdc34-201ENSMUST00000028580 Paqr6Q6TCG5 343 aa20.2■□□□□ 0.82
Ccdc34-201ENSMUST00000028580 Iars2Q8BIJ6 1012 aa20.2■□□□□ 0.82
Ccdc34-201ENSMUST00000028580 Usp43Q8BUM9 1132 aa20.2■□□□□ 0.82
Ccdc34-201ENSMUST00000028580 GneQ91WG8 722 aaKnown RBP20.2■□□□□ 0.82
Ccdc34-201ENSMUST00000028580 Rab27aQ9ERI2 221 aa20.2■□□□□ 0.82
Ccdc34-201ENSMUST00000028580 Nme3Q9WV85 169 aa20.2■□□□□ 0.82
Ccdc34-201ENSMUST00000028580 Smok3cA0A087WSF2 504 aa20.2■□□□□ 0.82
Ccdc34-201ENSMUST00000028580 Gm1141B9EJU1 475 aa20.2■□□□□ 0.82
Ccdc34-201ENSMUST00000028580 Atp6v0d1P51863 351 aa20.2■□□□□ 0.82
Ccdc34-201ENSMUST00000028580 Kir3dl1P83555 432 aa20.2■□□□□ 0.82
Ccdc34-201ENSMUST00000028580 Lypla1P97823 230 aa20.2■□□□□ 0.82
Ccdc34-201ENSMUST00000028580 Tshz2Q68FE9 1030 aa20.2■□□□□ 0.82
Ccdc34-201ENSMUST00000028580 Znf512Q69Z99 562 aa20.2■□□□□ 0.82
Ccdc34-201ENSMUST00000028580 Gm5414Q6IFZ8 552 aa20.2■□□□□ 0.82
Ccdc34-201ENSMUST00000028580 Ubxn7Q6P5G6 467 aa20.2■□□□□ 0.82
Ccdc34-201ENSMUST00000028580 Slc16a9Q7TM99 508 aa20.2■□□□□ 0.82
Ccdc34-201ENSMUST00000028580 GnsQ8BFR4 544 aa20.2■□□□□ 0.82
Ccdc34-201ENSMUST00000028580 Kcnv1Q8BZN2 503 aa20.2■□□□□ 0.82
Ccdc34-201ENSMUST00000028580 GldcQ91W43 1025 aa20.2■□□□□ 0.82
Ccdc34-201ENSMUST00000028580 CtsqQ91ZF4 343 aa20.2■□□□□ 0.82
Ccdc34-201ENSMUST00000028580 Serbp1Q9CY58 407 aaKnown RBP20.2■□□□□ 0.82
Ccdc34-201ENSMUST00000028580 Serpina1fQ9DCQ7 411 aa20.2■□□□□ 0.82
Ccdc34-201ENSMUST00000028580 RalbQ9JIW9 206 aa20.2■□□□□ 0.82
Ccdc34-201ENSMUST00000028580 Vmn2r11E9Q4X4 861 aa20.19■□□□□ 0.82
Ccdc34-201ENSMUST00000028580 Taf4E9QAP7 1042 aaKnown RBP20.19■□□□□ 0.82
Ccdc34-201ENSMUST00000028580 Rdh7O88451 316 aa20.19■□□□□ 0.82
Ccdc34-201ENSMUST00000028580 Adam15O88839 864 aa20.19■□□□□ 0.82
Ccdc34-201ENSMUST00000028580 Sypl2O89104 264 aa20.19■□□□□ 0.82
Ccdc34-201ENSMUST00000028580 Krt10P02535 570 aa20.19■□□□□ 0.82
Ccdc34-201ENSMUST00000028580 SagP20443 403 aa20.19■□□□□ 0.82
Ccdc34-201ENSMUST00000028580 Nploc4P60670 608 aa20.19■□□□□ 0.82
Ccdc34-201ENSMUST00000028580 Rnf157Q3TEL6 685 aa20.19■□□□□ 0.82
Ccdc34-201ENSMUST00000028580 Nxpe4Q52KP5 543 aa20.19■□□□□ 0.82
Ccdc34-201ENSMUST00000028580 Proser1Q5PRE5 913 aa20.19■□□□□ 0.82
Ccdc34-201ENSMUST00000028580 Znf148Q61624 794 aa20.19■□□□□ 0.82
Ccdc34-201ENSMUST00000028580 Gja6Q6S5G4 283 aa20.19■□□□□ 0.82
Ccdc34-201ENSMUST00000028580 Pnma2Q8BHK0 365 aa20.19■□□□□ 0.82
Ccdc34-201ENSMUST00000028580 4933402J07RikQ8BHX0 270 aa20.19■□□□□ 0.82
Ccdc34-201ENSMUST00000028580 Trim32Q8CH72 655 aa20.19■□□□□ 0.82
Ccdc34-201ENSMUST00000028580 CopaQ8CIE6 1224 aaKnown RBP20.19■□□□□ 0.82
Ccdc34-201ENSMUST00000028580 Pcdhb17Q91VD8 799 aa20.19■□□□□ 0.82
Ccdc34-201ENSMUST00000028580 Creld1Q91XD7 420 aa20.19■□□□□ 0.82
Ccdc34-201ENSMUST00000028580 Vangl2Q91ZD4 521 aa20.19■□□□□ 0.82
Ccdc34-201ENSMUST00000028580 Trim7Q923T7 510 aa20.19■□□□□ 0.82
Ccdc34-201ENSMUST00000028580 AenQ9CZI9 336 aaKnown RBP20.19■□□□□ 0.82
Ccdc34-201ENSMUST00000028580 Elp3Q9CZX0 547 aa20.19■□□□□ 0.82
Ccdc34-201ENSMUST00000028580 PdiltQ9DAN1 588 aa20.19■□□□□ 0.82
Ccdc34-201ENSMUST00000028580 Riok3Q9DBU3 519 aaKnown RBP20.19■□□□□ 0.82
Ccdc34-201ENSMUST00000028580 Plxna1P70206 1894 aa20.19■□□□□ 0.82
Ccdc34-201ENSMUST00000028580 Myo16Q5DU14 1919 aa20.19■□□□□ 0.82
Ccdc34-201ENSMUST00000028580 Gm43951A0A0N4SUT6 962 aa20.18■□□□□ 0.82
Ccdc34-201ENSMUST00000028580 4931406B18RikA2RSL7 367 aa20.18■□□□□ 0.82
Ccdc34-201ENSMUST00000028580 Dennd5bA2RSQ0 1274 aa20.18■□□□□ 0.82
Ccdc34-201ENSMUST00000028580 Trim5E9PV98 497 aa20.18■□□□□ 0.82
Ccdc34-201ENSMUST00000028580 Ccdc144bE9PVZ3 520 aa20.18■□□□□ 0.82
Ccdc34-201ENSMUST00000028580 4930426L09RikE9Q0N7 123 aa20.18■□□□□ 0.82
Ccdc34-201ENSMUST00000028580 Klf6O08584 283 aa20.18■□□□□ 0.82
Ccdc34-201ENSMUST00000028580 Hsd17b7O88736 334 aa20.18■□□□□ 0.82
Ccdc34-201ENSMUST00000028580 DesP31001 469 aaKnown RBP20.18■□□□□ 0.82
Ccdc34-201ENSMUST00000028580 PolgP54099 1218 aa20.18■□□□□ 0.82
Ccdc34-201ENSMUST00000028580 Il1rapl1P59823 695 aa20.18■□□□□ 0.82
Ccdc34-201ENSMUST00000028580 Dact3Q0PHV7 610 aa20.18■□□□□ 0.82
Ccdc34-201ENSMUST00000028580 Fbxw11Q5SRY7 542 aaKnown RBP20.18■□□□□ 0.82
Ccdc34-201ENSMUST00000028580 Map3k7Q62073 579 aa20.18■□□□□ 0.82
Ccdc34-201ENSMUST00000028580 Exoc3l4Q6DIA2 721 aa20.18■□□□□ 0.82
Ccdc34-201ENSMUST00000028580 Slco4a1Q8K078 723 aa20.18■□□□□ 0.82
Ccdc34-201ENSMUST00000028580 Zfp617Q91WM0 559 aa20.18■□□□□ 0.82
Ccdc34-201ENSMUST00000028580 Sult5a1Q91X36 291 aa20.18■□□□□ 0.82
Ccdc34-201ENSMUST00000028580 DarsQ922B2 501 aaKnown RBP20.18■□□□□ 0.82
Ccdc34-201ENSMUST00000028580 PtproE9Q612 1226 aa20.18■□□□□ 0.82
Ccdc34-201ENSMUST00000028580 Slc2a7P0C6A1 513 aa20.18■□□□□ 0.82
Ccdc34-201ENSMUST00000028580 RpsaP14206 295 aaKnown RBP20.18■□□□□ 0.82
Ccdc34-201ENSMUST00000028580 Cd72P21855 354 aa20.18■□□□□ 0.82
Ccdc34-201ENSMUST00000028580 Pdha1P35486 390 aaKnown RBP20.18■□□□□ 0.82
Ccdc34-201ENSMUST00000028580 NrlP54846 237 aa20.18■□□□□ 0.82
Ccdc34-201ENSMUST00000028580 Atp9bP98195 1146 aa20.18■□□□□ 0.82
Ccdc34-201ENSMUST00000028580 Itga4Q00651 1039 aa20.18■□□□□ 0.82
Ccdc34-201ENSMUST00000028580 Slc20a1Q61609 681 aa20.18■□□□□ 0.82
Ccdc34-201ENSMUST00000028580 Abcg2Q7TMS5 657 aa20.18■□□□□ 0.82
Ccdc34-201ENSMUST00000028580 Usp6nlQ80XC3 819 aa20.18■□□□□ 0.82
Ccdc34-201ENSMUST00000028580 Lrrc27Q80YS5 523 aa20.18■□□□□ 0.82
Ccdc34-201ENSMUST00000028580 Ccdc80Q8R2G6 949 aa20.18■□□□□ 0.82
Retrieved 100 of 22,080 RNA–protein pairs in 280.7 ms