RNA–Protein interactions for RNA: ENSMUST00000022646.8

Nkx3-1-201, Transcript of Homeobox protein Nkx-3.1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nkx3-1, Length 3,195 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-1-201ENSMUST00000022646 Bmp15Q9Z0L4 392 aa15.4■□□□□ 0.06
Nkx3-1-201ENSMUST00000022646 Zfc3h1B2RT41 1992 aaKnown RBP15.4■□□□□ 0.06
Nkx3-1-201ENSMUST00000022646 Cyp2a22B2RXZ2 492 aa15.4■□□□□ 0.06
Nkx3-1-201ENSMUST00000022646 Cyp2j6O54750 501 aa15.4■□□□□ 0.06
Nkx3-1-201ENSMUST00000022646 Nxpe4Q52KP5 543 aa15.4■□□□□ 0.06
Nkx3-1-201ENSMUST00000022646 Q5XFZ0 217 aa15.4■□□□□ 0.06
Nkx3-1-201ENSMUST00000022646 Dnajb13Q80Y75 316 aa15.4■□□□□ 0.06
Nkx3-1-201ENSMUST00000022646 LppQ8BFW7 613 aa15.4■□□□□ 0.06
Nkx3-1-201ENSMUST00000022646 Fam204aQ8C6C7 236 aa15.4■□□□□ 0.06
Nkx3-1-201ENSMUST00000022646 Smg8Q8VE18 991 aa15.4■□□□□ 0.06
Nkx3-1-201ENSMUST00000022646 Vangl2Q91ZD4 521 aa15.4■□□□□ 0.06
Nkx3-1-201ENSMUST00000022646 NumbQ9QZS3 653 aa15.4■□□□□ 0.06
Nkx3-1-201ENSMUST00000022646 Sf3b1Q99NB9 1304 aaKnown RBP15.4■□□□□ 0.06
Nkx3-1-201ENSMUST00000022646 FancfE9Q5Z5 343 aa15.39■□□□□ 0.05
Nkx3-1-201ENSMUST00000022646 Kbtbd2G3X9X1 623 aa15.39■□□□□ 0.05
Nkx3-1-201ENSMUST00000022646 Gm7942L7N277 499 aa15.39■□□□□ 0.05
Nkx3-1-201ENSMUST00000022646 Klc2O88448 599 aa15.39■□□□□ 0.05
Nkx3-1-201ENSMUST00000022646 Pcsk1P63239 753 aa15.39■□□□□ 0.05
Nkx3-1-201ENSMUST00000022646 Mea1Q64327 174 aa15.39■□□□□ 0.05
Nkx3-1-201ENSMUST00000022646 Gja6Q6S5G4 283 aa15.39■□□□□ 0.05
Nkx3-1-201ENSMUST00000022646 MrgpreQ91ZB7 310 aa15.39■□□□□ 0.05
Nkx3-1-201ENSMUST00000022646 Trim42Q9D2H5 723 aa15.39■□□□□ 0.05
Nkx3-1-201ENSMUST00000022646 Dennd5bA2RSQ0 1274 aa15.39■□□□□ 0.05
Nkx3-1-201ENSMUST00000022646 C7D3YXF5 845 aa15.39■□□□□ 0.05
Nkx3-1-201ENSMUST00000022646 Vmn2r72D3Z4N8 856 aa15.39■□□□□ 0.05
Nkx3-1-201ENSMUST00000022646 AlbP07724 608 aa15.39■□□□□ 0.05
Nkx3-1-201ENSMUST00000022646 ChgbP16014 677 aa15.39■□□□□ 0.05
Nkx3-1-201ENSMUST00000022646 PolgP54099 1218 aa15.39■□□□□ 0.05
Nkx3-1-201ENSMUST00000022646 Atp5bP56480 529 aaKnown RBP15.39■□□□□ 0.05
Nkx3-1-201ENSMUST00000022646 Pcbp1P60335 356 aaKnown RBP15.39■□□□□ 0.05
Nkx3-1-201ENSMUST00000022646 Grid2ipQ0QWG9 1203 aa15.39■□□□□ 0.05
Nkx3-1-201ENSMUST00000022646 Cage1Q5IR70 849 aa15.39■□□□□ 0.05
Nkx3-1-201ENSMUST00000022646 Bcar1Q61140 874 aa15.39■□□□□ 0.05
Nkx3-1-201ENSMUST00000022646 Sh3gl3Q62421 347 aa15.39■□□□□ 0.05
Nkx3-1-201ENSMUST00000022646 Efr3bQ6ZQ18 817 aa15.39■□□□□ 0.05
Nkx3-1-201ENSMUST00000022646 Fastkd5Q7TMV3 762 aa15.39■□□□□ 0.05
Nkx3-1-201ENSMUST00000022646 Stx16Q8BVI5 326 aa15.39■□□□□ 0.05
Nkx3-1-201ENSMUST00000022646 Slc25a3Q8VEM8 357 aaKnown RBP15.39■□□□□ 0.05
Nkx3-1-201ENSMUST00000022646 CtsqQ91ZF4 343 aa15.39■□□□□ 0.05
Nkx3-1-201ENSMUST00000022646 StambpQ9CQ26 424 aa15.39■□□□□ 0.05
Nkx3-1-201ENSMUST00000022646 Serbp1Q9CY58 407 aaKnown RBP15.39■□□□□ 0.05
Nkx3-1-201ENSMUST00000022646 Slamf8Q9D3G2 278 aa15.39■□□□□ 0.05
Nkx3-1-201ENSMUST00000022646 4930513O06RikQ9D549 161 aa15.39■□□□□ 0.05
Nkx3-1-201ENSMUST00000022646 Tsga13Q9DA17 273 aa15.39■□□□□ 0.05
Nkx3-1-201ENSMUST00000022646 Nfx1B1AY10 1114 aaKnown RBP15.38■□□□□ 0.05
Nkx3-1-201ENSMUST00000022646 Ccdc8D3YZV8 685 aa15.38■□□□□ 0.05
Nkx3-1-201ENSMUST00000022646 TpteG5E8H5 664 aa15.38■□□□□ 0.05
Nkx3-1-201ENSMUST00000022646 Vps4bP46467 444 aaKnown RBP15.38■□□□□ 0.05
Nkx3-1-201ENSMUST00000022646 Abce1P61222 599 aaKnown RBP15.38■□□□□ 0.05
Nkx3-1-201ENSMUST00000022646 Hoxb13P70321 286 aa15.38■□□□□ 0.05
Nkx3-1-201ENSMUST00000022646 HmgcrQ01237 887 aa15.38■□□□□ 0.05
Nkx3-1-201ENSMUST00000022646 Has1Q61647 583 aa15.38■□□□□ 0.05
Nkx3-1-201ENSMUST00000022646 Map3k7Q62073 579 aa15.38■□□□□ 0.05
Nkx3-1-201ENSMUST00000022646 Clip4Q8CI96 704 aa15.38■□□□□ 0.05
Nkx3-1-201ENSMUST00000022646 FtcdQ91XD4 541 aa15.38■□□□□ 0.05
Nkx3-1-201ENSMUST00000022646 Actr3Q99JY9 418 aaKnown RBP15.38■□□□□ 0.05
Nkx3-1-201ENSMUST00000022646 Slc12a4Q9JIS8 1085 aa15.38■□□□□ 0.05
Nkx3-1-201ENSMUST00000022646 Dach1Q9QYB2 751 aa15.38■□□□□ 0.05
Nkx3-1-201ENSMUST00000022646 Tmem131O70472 1877 aa15.38■□□□□ 0.05
Nkx3-1-201ENSMUST00000022646 Smok3cA0A087WSF2 504 aa15.38■□□□□ 0.05
Nkx3-1-201ENSMUST00000022646 Bclaf3A2AG58 752 aaKnown RBP15.38■□□□□ 0.05
Nkx3-1-201ENSMUST00000022646 Slc16a6B1AT66 607 aa15.38■□□□□ 0.05
Nkx3-1-201ENSMUST00000022646 Ptchd4B9EKX1 904 aa15.38■□□□□ 0.05
Nkx3-1-201ENSMUST00000022646 Ap2a1P17426 977 aaKnown RBP15.38■□□□□ 0.05
Nkx3-1-201ENSMUST00000022646 LdlrP35951 862 aa15.38■□□□□ 0.05
Nkx3-1-201ENSMUST00000022646 Cyth2P63034 400 aaKnown RBP15.38■□□□□ 0.05
Nkx3-1-201ENSMUST00000022646 Mettl17Q3U2U7 461 aa15.38■□□□□ 0.05
Nkx3-1-201ENSMUST00000022646 Heatr9Q5QNV8 569 aa15.38■□□□□ 0.05
Nkx3-1-201ENSMUST00000022646 Znf821Q6PD05 413 aa15.38■□□□□ 0.05
Nkx3-1-201ENSMUST00000022646 Slc16a9Q7TM99 508 aa15.38■□□□□ 0.05
Nkx3-1-201ENSMUST00000022646 Q80Y73 168 aa15.38■□□□□ 0.05
Nkx3-1-201ENSMUST00000022646 Lrrc27Q80YS5 523 aa15.38■□□□□ 0.05
Nkx3-1-201ENSMUST00000022646 Prr33Q8C494 260 aa15.38■□□□□ 0.05
Nkx3-1-201ENSMUST00000022646 Slco4a1Q8K078 723 aa15.38■□□□□ 0.05
Nkx3-1-201ENSMUST00000022646 Sorcs3Q8VI51 1219 aa15.38■□□□□ 0.05
Nkx3-1-201ENSMUST00000022646 Sike1Q9CPR7 207 aa15.38■□□□□ 0.05
Nkx3-1-201ENSMUST00000022646 SarnpQ9D1J3 210 aaKnown RBP15.38■□□□□ 0.05
Nkx3-1-201ENSMUST00000022646 Doc2gQ9ESN1 387 aa15.38■□□□□ 0.05
Nkx3-1-201ENSMUST00000022646 Slc29a1Q9JIM1 460 aa15.38■□□□□ 0.05
Nkx3-1-201ENSMUST00000022646 Dlc1Q9R0Z9 1092 aa15.38■□□□□ 0.05
Nkx3-1-201ENSMUST00000022646 Pex11bQ9Z210 259 aa15.38■□□□□ 0.05
Nkx3-1-201ENSMUST00000022646 ThadaA8C756 1938 aa15.38■□□□□ 0.05
Nkx3-1-201ENSMUST00000022646 LctF8VPT3 1931 aa15.38■□□□□ 0.05
Nkx3-1-201ENSMUST00000022646 Olfr1160A2AVT0 319 aa15.38■□□□□ 0.05
Nkx3-1-201ENSMUST00000022646 Cyp2b13A6H6J2 491 aa15.38■□□□□ 0.05
Nkx3-1-201ENSMUST00000022646 Zfp384E9Q1A5 584 aaKnown RBP15.38■□□□□ 0.05
Nkx3-1-201ENSMUST00000022646 Zfp358E9Q8M1 571 aa15.38■□□□□ 0.05
Nkx3-1-201ENSMUST00000022646 EsrraO08580 422 aa15.38■□□□□ 0.05
Nkx3-1-201ENSMUST00000022646 Nedd9O35177 833 aa15.38■□□□□ 0.05
Nkx3-1-201ENSMUST00000022646 TankP70347 448 aa15.38■□□□□ 0.05
Nkx3-1-201ENSMUST00000022646 Arl13bQ640N2 427 aa15.38■□□□□ 0.05
Nkx3-1-201ENSMUST00000022646 Paqr6Q6TCG5 343 aa15.38■□□□□ 0.05
Nkx3-1-201ENSMUST00000022646 Rad9bQ6WBX7 403 aa15.38■□□□□ 0.05
Nkx3-1-201ENSMUST00000022646 Usp43Q8BUM9 1132 aa15.38■□□□□ 0.05
Nkx3-1-201ENSMUST00000022646 Plin5Q8BVZ1 463 aa15.38■□□□□ 0.05
Nkx3-1-201ENSMUST00000022646 HpdlQ8K248 371 aa15.38■□□□□ 0.05
Nkx3-1-201ENSMUST00000022646 Timd2Q8R183 305 aa15.38■□□□□ 0.05
Nkx3-1-201ENSMUST00000022646 Mrps18aQ99N85 196 aa15.38■□□□□ 0.05
Nkx3-1-201ENSMUST00000022646 Serpinb9bQ9DAV6 377 aa15.38■□□□□ 0.05
Nkx3-1-201ENSMUST00000022646 Cab39lQ9DB16 337 aa15.38■□□□□ 0.05
Retrieved 100 of 22,080 RNA–protein pairs in 81.1 ms