RNA–Protein interactions for RNA: ENSMUST00000002043.9

Ccdc47-201, Transcript of Coiled-coil domain-containing protein 47, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc47, Length 5,193 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc47-201ENSMUST00000002043 Edf1Q9JMG1 148 aaKnown RBP9.34□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Grk1Q9WVL4 564 aa9.34□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Slfn14V9GXG1 899 aa9.34□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Sult2a7A0A1B0GRF0 313 aa9.34□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Gm5407E9Q7Q1 248 aa9.34□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Nek2O35942 443 aa9.34□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Tnfaip1O70479 316 aa9.34□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Elk3P41971 409 aa9.34□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Rbm20Q3UQS8 1199 aaKnown RBP9.34□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Lcp2Q60787 533 aaKnown RBP9.34□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Efr3bQ6ZQ18 817 aa9.34□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 PolnQ7TQ07 864 aa9.34□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Aldh3b1Q80VQ0 468 aa9.34□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Baiap2Q8BKX1 535 aa9.34□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Wwp1Q8BZZ3 918 aa9.34□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Vps26bQ8C0E2 336 aa9.34□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Olfr330Q8VGD9 315 aa9.34□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Tdrd3Q91W18 743 aaKnown RBP9.34□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 GcshQ91WK5 170 aa9.34□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Ferd3lQ923Z4 168 aa9.34□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Tssk3Q9D2E1 268 aa9.34□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Ascc1Q9D8Z1 356 aaKnown RBP9.34□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Atg7Q9D906 698 aa9.34□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Tex22Q9D9U4 189 aa9.34□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Mid2Q9QUS6 705 aa9.34□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 2610021A01RikE9Q0Q3 834 aa9.33□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Ephb3P54754 993 aaKnown RBP9.33□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Stx4P70452 298 aa9.33□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Zbtb14Q08376 449 aa9.33□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Fdxacb1Q3UY23 622 aa9.33□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Cpa1Q7TPZ8 419 aa9.33□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Tmc3Q7TQ69 1130 aa9.33□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Cpsf4Q8BQZ5 211 aaKnown RBP9.33□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Ecrg4Q99LS0 148 aa9.33□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Nol3Q9D1X0 220 aa9.33□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Clvs1Q9D4C9 354 aa9.33□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 PgdQ9DCD0 483 aa9.33□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Mapk9Q9WTU6 423 aa9.33□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Gm10406A6NAS4 205 aa9.33□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Gm3373A6NAS7 205 aa9.33□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Gm3298E9PW80 205 aa9.33□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Gm3667K7N757 205 aa9.33□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 AvilO88398 819 aa9.33□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Traf6P70196 530 aa9.33□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 PamP97467 979 aa9.33□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Nek10Q3UGM2 1111 aa9.33□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Ceacam5Q3UKK2 947 aa9.33□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Gm3558Q5FWC9 205 aa9.33□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Rexo4Q6PAQ4 432 aaKnown RBP9.33□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Ago4Q8CJF8 861 aa9.33□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 GaleQ8R059 347 aa9.33□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Mgat5Q8R4G6 740 aa9.33□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Olfr805Q8VFI4 319 aa9.33□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 TfQ921I1 697 aa9.33□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Q9CQF4 240 aa9.33□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 PpidQ9CR16 370 aaKnown RBP9.33□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Cmtm6Q9CZ69 183 aa9.33□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Adck1Q9D0L4 525 aa9.33□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Actrt1Q9D9J3 376 aa9.33□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Limd1Q9QXD8 668 aa9.33□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Copg2Q9QXK3 871 aa9.33□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Tmem115Q9WUH1 350 aa9.33□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Clcn5Q9WVD4 746 aa9.33□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Mad2l1Q9Z1B5 205 aa9.33□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Adgra2Q91ZV8 1336 aa9.33□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Gm5737A0A140LI11 423 aa9.33□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 A0A1L1ST33 502 aa9.33□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Siah3B2RWG3 268 aa9.33□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Kcnt2D3Z649 1135 aa9.33□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Vmn2r63E9Q0K5 859 aa9.33□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Gm9268E9Q0M3 861 aa9.33□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Vmn2r62K7N712 859 aa9.33□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Pole2O54956 527 aa9.33□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Magea6O89010 325 aa9.33□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Rpl5P47962 297 aaKnown RBP9.33□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Bace1P56818 501 aa9.33□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 NfycP70353 335 aa9.33□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 PrkcqQ02111 707 aa9.33□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Upf3aQ3ULJ3 422 aa9.33□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Slfn4Q3UV66 602 aa9.33□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Smarcd1Q61466 515 aaKnown RBP9.33□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Pik3r3Q64143 461 aa9.33□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Zswim9Q6DI92 447 aa9.33□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Vmn2r26Q6TAC4 855 aa9.33□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Tcaf1Q8BNE1 924 aa9.33□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Tbrg4Q91YM4 630 aaKnown RBP9.33□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Acot13Q9CQR4 140 aa9.33□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 DmgdhQ9DBT9 869 aa9.33□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Tle6Q9WVB3 581 aa9.33□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Itih4A6X935 942 aa9.33□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Gm7945F6QI24 236 aa9.33□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Bbip1J3QMK2 67 aa9.33□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Gm7694J3QNH8 270 aa9.33□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Mybpc3O70468 1270 aaKnown RBP9.33□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 IapP03975 557 aa9.33□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 CremP27699 357 aa9.33□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Sephs2P97364 452 aa9.33□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Meis3P97368 378 aa9.33□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Ly9Q01965 654 aa9.33□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Znf112Q0VAW7 879 aa9.33□□□□□ -0.92
Retrieved 100 of 22,080 RNA–protein pairs in 24.1 ms