RNA–Protein interactions for RNA: ENST00000642137.1

LINC00339-213, long intergenic non-protein coding RNA 339, humanhuman

BASIC

Gene LINC00339, Length 222 nt, Biotype transcribed processed pseudogene, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-213ENST00000642137 MFSD7Q6UXD7 560 aa12.7□□□□□ -0.38
LINC00339-213ENST00000642137 SPOCD1Q6ZMY3 1216 aa12.7□□□□□ -0.38
LINC00339-213ENST00000642137 TPGS1Q6ZTW0 290 aa12.7□□□□□ -0.38
LINC00339-213ENST00000642137 RFX8Q6ZV50 586 aa12.7□□□□□ -0.38
LINC00339-213ENST00000642137 TMEM25Q86YD3 366 aa12.7□□□□□ -0.38
LINC00339-213ENST00000642137 HJURPQ8NCD3 748 aaPredicted RBP12.7□□□□□ -0.38
LINC00339-213ENST00000642137 DDI1Q8WTU0 396 aa12.7□□□□□ -0.38
LINC00339-213ENST00000642137 RSAD2Q8WXG1 361 aa12.7□□□□□ -0.38
LINC00339-213ENST00000642137 ATP2A3Q93084 1043 aa12.7□□□□□ -0.38
LINC00339-213ENST00000642137 FAF2Q96CS3 445 aa12.7□□□□□ -0.38
LINC00339-213ENST00000642137 RPRD1AQ96P16 312 aaPredicted RBP12.7□□□□□ -0.38
LINC00339-213ENST00000642137 RNF157Q96PX1 679 aa12.7□□□□□ -0.38
LINC00339-213ENST00000642137 ASB2Q96Q27 587 aa12.7□□□□□ -0.38
LINC00339-213ENST00000642137 CALN1Q9BXU9 219 aa12.7□□□□□ -0.38
LINC00339-213ENST00000642137 MAK16Q9BXY0 300 aaKnown RBP12.7□□□□□ -0.38
LINC00339-213ENST00000642137 CARD9Q9H257 536 aa12.7□□□□□ -0.38
LINC00339-213ENST00000642137 CATSPERBQ9H7T0 1116 aa12.7□□□□□ -0.38
LINC00339-213ENST00000642137 ECT2Q9H8V3 914 aa12.7□□□□□ -0.38
LINC00339-213ENST00000642137 TRPV5Q9NQA5 729 aa12.7□□□□□ -0.38
LINC00339-213ENST00000642137 DONSONQ9NYP3 566 aa12.7□□□□□ -0.38
LINC00339-213ENST00000642137 DNAI1Q9UI46 699 aa12.7□□□□□ -0.38
LINC00339-213ENST00000642137 REV3LO60673 3130 aa12.7□□□□□ -0.38
LINC00339-213ENST00000642137 CES2O00748 559 aa12.69□□□□□ -0.38
LINC00339-213ENST00000642137 KCNK3O14649 394 aa12.69□□□□□ -0.38
LINC00339-213ENST00000642137 FGF10O15520 208 aaPredicted RBP12.69□□□□□ -0.38
LINC00339-213ENST00000642137 TBL1XO60907 577 aa12.69□□□□□ -0.38
LINC00339-213ENST00000642137 CLDN11O75508 207 aa12.69□□□□□ -0.38
LINC00339-213ENST00000642137 PENKP01210 267 aaPredicted RBP12.69□□□□□ -0.38
LINC00339-213ENST00000642137 TCP1P17987 556 aaKnown RBP12.69□□□□□ -0.38
LINC00339-213ENST00000642137 ERCC2P18074 760 aa12.69□□□□□ -0.38
LINC00339-213ENST00000642137 AMPD1P23109 780 aa12.69□□□□□ -0.38
LINC00339-213ENST00000642137 EPHB2P29323 1055 aa12.69□□□□□ -0.38
LINC00339-213ENST00000642137 PTPN7P35236 360 aa12.69□□□□□ -0.38
LINC00339-213ENST00000642137 GGCXP38435 758 aa12.69□□□□□ -0.38
LINC00339-213ENST00000642137 CDKN2BP42772 138 aa12.69□□□□□ -0.38
LINC00339-213ENST00000642137 RPS24P62847 133 aaKnown RBP12.69□□□□□ -0.38
LINC00339-213ENST00000642137 ZP2Q05996 745 aa12.69□□□□□ -0.38
LINC00339-213ENST00000642137 MMRN1Q13201 1228 aa12.69□□□□□ -0.38
LINC00339-213ENST00000642137 DPYSQ14117 519 aa12.69□□□□□ -0.38
LINC00339-213ENST00000642137 PPP2R5EQ16537 467 aa12.69□□□□□ -0.38
LINC00339-213ENST00000642137 TFDP3Q5H9I0 405 aa12.69□□□□□ -0.38
LINC00339-213ENST00000642137 LY6G5CQ5SRR4 150 aa12.69□□□□□ -0.38
LINC00339-213ENST00000642137 FYB2Q5VWT5 728 aa12.69□□□□□ -0.38
LINC00339-213ENST00000642137 RNF43Q68DV7 783 aa12.69□□□□□ -0.38
LINC00339-213ENST00000642137 TRIM68Q6AZZ1 485 aa12.69□□□□□ -0.38
LINC00339-213ENST00000642137 RWDD4Q6NW29 188 aaKnown RBP12.69□□□□□ -0.38
LINC00339-213ENST00000642137 SYT10Q6XYQ8 523 aa12.69□□□□□ -0.38
LINC00339-213ENST00000642137 CHST9Q7L1S5 443 aa12.69□□□□□ -0.38
LINC00339-213ENST00000642137 MYEOVQ96EZ4 313 aa12.69□□□□□ -0.38
LINC00339-213ENST00000642137 ASIC4Q96FT7 647 aa12.69□□□□□ -0.38
LINC00339-213ENST00000642137 ZFYVE19Q96K21 471 aa12.69□□□□□ -0.38
LINC00339-213ENST00000642137 C16orf45Q96MC5 204 aaPredicted RBP12.69□□□□□ -0.38
LINC00339-213ENST00000642137 CSPG4P5Q96PW8 444 aa12.69□□□□□ -0.38
LINC00339-213ENST00000642137 EBF3Q9H4W6 596 aa12.69□□□□□ -0.38
LINC00339-213ENST00000642137 BRD9Q9H8M2 597 aa12.69□□□□□ -0.38
LINC00339-213ENST00000642137 HPS4Q9NQG7 708 aa12.69□□□□□ -0.38
LINC00339-213ENST00000642137 KLHL11Q9NVR0 708 aa12.69□□□□□ -0.38
LINC00339-213ENST00000642137 SNX12Q9UMY4 172 aa12.69□□□□□ -0.38
LINC00339-213ENST00000642137 NEU3Q9UQ49 428 aa12.69□□□□□ -0.38
LINC00339-213ENST00000642137 hCG_1818297A0A087WSY0 165 aa12.68□□□□□ -0.38
LINC00339-213ENST00000642137 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.68□□□□□ -0.38
LINC00339-213ENST00000642137 A0A1B0GVM2 712 aa12.68□□□□□ -0.38
LINC00339-213ENST00000642137 TCAF2A6NFQ2 919 aa12.68□□□□□ -0.38
LINC00339-213ENST00000642137 ARNTLO00327 626 aa12.68□□□□□ -0.38
LINC00339-213ENST00000642137 CNTN5O94779 1100 aa12.68□□□□□ -0.38
LINC00339-213ENST00000642137 ADH1CP00326 375 aa12.68□□□□□ -0.38
LINC00339-213ENST00000642137 CYP17A1P05093 508 aa12.68□□□□□ -0.38
LINC00339-213ENST00000642137 ARSAP15289 507 aa12.68□□□□□ -0.38
LINC00339-213ENST00000642137 ZFXP17010 805 aaPredicted RBP12.68□□□□□ -0.38
LINC00339-213ENST00000642137 DNA2P51530 1060 aa12.68□□□□□ -0.38
LINC00339-213ENST00000642137 SGSHP51688 502 aa12.68□□□□□ -0.38
LINC00339-213ENST00000642137 VCPP55072 806 aaKnown RBP12.68□□□□□ -0.38
LINC00339-213ENST00000642137 ZNF177Q13360 481 aaPredicted RBP12.68□□□□□ -0.38
LINC00339-213ENST00000642137 TDGQ13569 410 aa12.68□□□□□ -0.38
LINC00339-213ENST00000642137 TFDP2Q14188 446 aa12.68□□□□□ -0.38
LINC00339-213ENST00000642137 ANO4Q32M45 955 aa12.68□□□□□ -0.38
LINC00339-213ENST00000642137 ALFQ53S48 1182 aa12.68□□□□□ -0.38
LINC00339-213ENST00000642137 SEL1L2Q5TEA6 688 aa12.68□□□□□ -0.38
LINC00339-213ENST00000642137 DCAF12L1Q5VU92 463 aa12.68□□□□□ -0.38
LINC00339-213ENST00000642137 ANKS1BQ7Z6G8 1248 aa12.68□□□□□ -0.38
LINC00339-213ENST00000642137 NLRP14Q86W24 1093 aa12.68□□□□□ -0.38
LINC00339-213ENST00000642137 CCDC50Q8IVM0 306 aa12.68□□□□□ -0.38
LINC00339-213ENST00000642137 CFAP52Q8N1V2 620 aa12.68□□□□□ -0.38
LINC00339-213ENST00000642137 CPA6Q8N4T0 437 aa12.68□□□□□ -0.38
LINC00339-213ENST00000642137 LZTR1Q8N653 840 aa12.68□□□□□ -0.38
LINC00339-213ENST00000642137 ZNF557Q8N988 423 aaPredicted RBP12.68□□□□□ -0.38
LINC00339-213ENST00000642137 PCDH19Q8TAB3 1148 aa12.68□□□□□ -0.38
LINC00339-213ENST00000642137 CSGALNACT1Q8TDX6 532 aa12.68□□□□□ -0.38
LINC00339-213ENST00000642137 PRICKLE1Q96MT3 831 aaPredicted RBP12.68□□□□□ -0.38
LINC00339-213ENST00000642137 XPO6Q96QU8 1125 aaKnown RBP12.68□□□□□ -0.38
LINC00339-213ENST00000642137 OSBPL9Q96SU4 736 aa12.68□□□□□ -0.38
LINC00339-213ENST00000642137 BBS2Q9BXC9 721 aa12.68□□□□□ -0.38
LINC00339-213ENST00000642137 SLC2A11Q9BYW1 496 aa12.68□□□□□ -0.38
LINC00339-213ENST00000642137 OSBPL8Q9BZF1 889 aa12.68□□□□□ -0.38
LINC00339-213ENST00000642137 TMEM248Q9NWD8 314 aa12.68□□□□□ -0.38
LINC00339-213ENST00000642137 MPP6Q9NZW5 540 aa12.68□□□□□ -0.38
LINC00339-213ENST00000642137 FBXO10Q9UK96 956 aa12.68□□□□□ -0.38
LINC00339-213ENST00000642137 SAR1BQ9Y6B6 198 aa12.68□□□□□ -0.38
LINC00339-213ENST00000642137 DCLK1O15075 740 aa12.67□□□□□ -0.38
LINC00339-213ENST00000642137 FANCGO15287 622 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms