RNA–Protein interactions for RNA: ENST00000642021.1

PHGDH-233, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,794 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-233ENST00000642021 FRMD7Q6ZUT3 714 aa14.19□□□□□ -0.14
PHGDH-233ENST00000642021 HPS6Q86YV9 775 aa14.19□□□□□ -0.14
PHGDH-233ENST00000642021 SLC26A7Q8TE54 656 aa14.19□□□□□ -0.14
PHGDH-233ENST00000642021 ETAA1Q9NY74 926 aa14.19□□□□□ -0.14
PHGDH-233ENST00000642021 GINS2Q9Y248 185 aa14.19□□□□□ -0.14
PHGDH-233ENST00000642021 PTPRFP10586 1907 aa14.19□□□□□ -0.14
PHGDH-233ENST00000642021 SYNJ2BP-COX16A0A087WUM0 186 aa14.19□□□□□ -0.14
PHGDH-233ENST00000642021 CCNT2O60583 730 aaKnown RBP14.19□□□□□ -0.14
PHGDH-233ENST00000642021 USP12O75317 370 aa14.19□□□□□ -0.14
PHGDH-233ENST00000642021 FKBP6O75344 327 aa14.19□□□□□ -0.14
PHGDH-233ENST00000642021 PGAM1P18669 254 aa14.19□□□□□ -0.14
PHGDH-233ENST00000642021 POLE2P56282 527 aa14.19□□□□□ -0.14
PHGDH-233ENST00000642021 ABCE1P61221 599 aaKnown RBP14.19□□□□□ -0.14
PHGDH-233ENST00000642021 ASPHQ12797 758 aa14.19□□□□□ -0.14
PHGDH-233ENST00000642021 NAPRTQ6XQN6 538 aa14.19□□□□□ -0.14
PHGDH-233ENST00000642021 ZDHHC17Q8IUH5 632 aa14.19□□□□□ -0.14
PHGDH-233ENST00000642021 GALNT15Q8N3T1 639 aa14.19□□□□□ -0.14
PHGDH-233ENST00000642021 ATP2A3Q93084 1043 aa14.19□□□□□ -0.14
PHGDH-233ENST00000642021 MPHOSPH6Q99547 160 aaKnown RBP14.19□□□□□ -0.14
PHGDH-233ENST00000642021 SIKE1Q9BRV8 207 aa14.19□□□□□ -0.14
PHGDH-233ENST00000642021 COX16Q9P0S2 106 aa14.19□□□□□ -0.14
PHGDH-233ENST00000642021 CDH22Q9UJ99 828 aa14.19□□□□□ -0.14
PHGDH-233ENST00000642021 ZBTB14O43829 449 aa14.18□□□□□ -0.14
PHGDH-233ENST00000642021 DESP17661 470 aa14.18□□□□□ -0.14
PHGDH-233ENST00000642021 HOXA11P31270 313 aaPredicted RBP14.18□□□□□ -0.14
PHGDH-233ENST00000642021 GRM5P41594 1212 aa14.18□□□□□ -0.14
PHGDH-233ENST00000642021 TMEM62Q0P6H9 643 aa14.18□□□□□ -0.14
PHGDH-233ENST00000642021 DLG2Q15700 870 aa14.18□□□□□ -0.14
PHGDH-233ENST00000642021 DBN1Q16643 649 aa14.18□□□□□ -0.14
PHGDH-233ENST00000642021 TCHHL1Q5QJ38 904 aaPredicted RBP14.18□□□□□ -0.14
PHGDH-233ENST00000642021 ARHGAP17Q68EM7 881 aa14.18□□□□□ -0.14
PHGDH-233ENST00000642021 MTHFD1LQ6UB35 978 aa14.18□□□□□ -0.14
PHGDH-233ENST00000642021 DHDDSQ86SQ9 333 aa14.18□□□□□ -0.14
PHGDH-233ENST00000642021 DEFB107AQ8IZN7 70 aa14.18□□□□□ -0.14
PHGDH-233ENST00000642021 DEFB106AQ8N104 65 aa14.18□□□□□ -0.14
PHGDH-233ENST00000642021 ZNF567Q8N184 647 aa14.18□□□□□ -0.14
PHGDH-233ENST00000642021 ANKRD52Q8NB46 1076 aa14.18□□□□□ -0.14
PHGDH-233ENST00000642021 CCNYQ8ND76 341 aa14.18□□□□□ -0.14
PHGDH-233ENST00000642021 OR6Y1Q8NGX8 325 aa14.18□□□□□ -0.14
PHGDH-233ENST00000642021 MAPK15Q8TD08 544 aa14.18□□□□□ -0.14
PHGDH-233ENST00000642021 PGBD4Q96DM1 585 aa14.18□□□□□ -0.14
PHGDH-233ENST00000642021 EIF2AQ9BY44 585 aaKnown RBP14.18□□□□□ -0.14
PHGDH-233ENST00000642021 PRDM12Q9H4Q4 367 aa14.18□□□□□ -0.14
PHGDH-233ENST00000642021 ACSS2Q9NR19 701 aa14.18□□□□□ -0.14
PHGDH-233ENST00000642021 FZD10Q9ULW2 581 aa14.18□□□□□ -0.14
PHGDH-233ENST00000642021 PAPPA2Q9BXP8 1791 aa14.18□□□□□ -0.14
PHGDH-233ENST00000642021 A0A0G2JLL6 359 aaPredicted RBP14.18□□□□□ -0.14
PHGDH-233ENST00000642021 DCXO43602 365 aa14.18□□□□□ -0.14
PHGDH-233ENST00000642021 SLC25A27O95847 323 aa14.18□□□□□ -0.14
PHGDH-233ENST00000642021 ITGAXP20702 1163 aa14.18□□□□□ -0.14
PHGDH-233ENST00000642021 ARL4AP40617 200 aa14.18□□□□□ -0.14
PHGDH-233ENST00000642021 HARS2P49590 506 aaKnown RBP14.18□□□□□ -0.14
PHGDH-233ENST00000642021 MSLNQ13421 630 aaPredicted RBP14.18□□□□□ -0.14
PHGDH-233ENST00000642021 ZBTB6Q15916 424 aa14.18□□□□□ -0.14
PHGDH-233ENST00000642021 CWF19L1Q69YN2 538 aaKnown RBP14.18□□□□□ -0.14
PHGDH-233ENST00000642021 AAGABQ6PD74 315 aa14.18□□□□□ -0.14
PHGDH-233ENST00000642021 MOB2Q70IA6 237 aa14.18□□□□□ -0.14
PHGDH-233ENST00000642021 PRRT2Q7Z6L0 340 aaPredicted RBP14.18□□□□□ -0.14
PHGDH-233ENST00000642021 RASSF3Q86WH2 238 aa14.18□□□□□ -0.14
PHGDH-233ENST00000642021 DCLK2Q8N568 766 aa14.18□□□□□ -0.14
PHGDH-233ENST00000642021 ZNF781Q8N8C0 355 aa14.18□□□□□ -0.14
PHGDH-233ENST00000642021 PPP1R13LQ8WUF5 828 aa14.18□□□□□ -0.14
PHGDH-233ENST00000642021 KBTBD7Q8WVZ9 684 aa14.18□□□□□ -0.14
PHGDH-233ENST00000642021 AGAP2Q99490 1192 aa14.18□□□□□ -0.14
PHGDH-233ENST00000642021 FAM124BQ9H5Z6 455 aaPredicted RBP14.18□□□□□ -0.14
PHGDH-233ENST00000642021 STN1Q9H668 368 aaKnown RBP14.18□□□□□ -0.14
PHGDH-233ENST00000642021 SNX15Q9NRS6 342 aa14.18□□□□□ -0.14
PHGDH-233ENST00000642021 DNAJC28Q9NX36 388 aa14.18□□□□□ -0.14
PHGDH-233ENST00000642021 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP14.18□□□□□ -0.14
PHGDH-233ENST00000642021 PACSIN3Q9UKS6 424 aa14.18□□□□□ -0.14
PHGDH-233ENST00000642021 POMPQ9Y244 141 aa14.18□□□□□ -0.14
PHGDH-233ENST00000642021 POLR2AP24928 1970 aaKnown RBP14.18□□□□□ -0.14
PHGDH-233ENST00000642021 KCNK1O00180 336 aa14.17□□□□□ -0.14
PHGDH-233ENST00000642021 SPTLC1O15269 473 aa14.17□□□□□ -0.14
PHGDH-233ENST00000642021 TOMM70O94826 608 aa14.17□□□□□ -0.14
PHGDH-233ENST00000642021 CPA3P15088 417 aa14.17□□□□□ -0.14
PHGDH-233ENST00000642021 ALOX15P16050 662 aaPredicted RBP14.17□□□□□ -0.14
PHGDH-233ENST00000642021 BTKQ06187 659 aa14.17□□□□□ -0.14
PHGDH-233ENST00000642021 BST2Q10589 180 aaKnown RBP14.17□□□□□ -0.14
PHGDH-233ENST00000642021 KYAT1Q16773 422 aa14.17□□□□□ -0.14
PHGDH-233ENST00000642021 KIZQ2M2Z5 673 aa14.17□□□□□ -0.14
PHGDH-233ENST00000642021 SLC9B1Q4ZJI4 515 aa14.17□□□□□ -0.14
PHGDH-233ENST00000642021 OTUD1Q5VV17 481 aaPredicted RBP14.17□□□□□ -0.14
PHGDH-233ENST00000642021 MAMDC4Q6UXC1 1216 aa14.17□□□□□ -0.14
PHGDH-233ENST00000642021 NT5DC4Q86YG4 428 aa14.17□□□□□ -0.14
PHGDH-233ENST00000642021 PDSS2Q86YH6 399 aa14.17□□□□□ -0.14
PHGDH-233ENST00000642021 ACVR1CQ8NER5 493 aa14.17□□□□□ -0.14
PHGDH-233ENST00000642021 OR52K1Q8NGK4 314 aa14.17□□□□□ -0.14
PHGDH-233ENST00000642021 AGR3Q8TD06 166 aa14.17□□□□□ -0.14
PHGDH-233ENST00000642021 SLC2A14Q8TDB8 520 aa14.17□□□□□ -0.14
PHGDH-233ENST00000642021 ACTRT2Q8TDY3 377 aa14.17□□□□□ -0.14
PHGDH-233ENST00000642021 PPP4R1Q8TF05 950 aa14.17□□□□□ -0.14
PHGDH-233ENST00000642021 AGAP3Q96P47 875 aa14.17□□□□□ -0.14
PHGDH-233ENST00000642021 SH3GL3Q99963 347 aa14.17□□□□□ -0.14
PHGDH-233ENST00000642021 COG4Q9H9E3 785 aa14.17□□□□□ -0.14
PHGDH-233ENST00000642021 CAB39LQ9H9S4 337 aa14.17□□□□□ -0.14
PHGDH-233ENST00000642021 PDP2Q9P2J9 529 aa14.17□□□□□ -0.14
PHGDH-233ENST00000642021 MAGED2Q9UNF1 606 aaPredicted RBP14.17□□□□□ -0.14
PHGDH-233ENST00000642021 PPP2R3BQ9Y5P8 575 aa14.17□□□□□ -0.14
PHGDH-233ENST00000642021 CSADQ9Y600 493 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms