RNA–Protein interactions for RNA: ENST00000641213.1

PHGDH-211, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,053 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-211ENST00000641213 ARMC2Q8NEN0 867 aa17.53■□□□□ 0.4
PHGDH-211ENST00000641213 IRGQQ8WZA9 623 aa17.53■□□□□ 0.4
PHGDH-211ENST00000641213 GORASP1Q9BQQ3 440 aa17.53■□□□□ 0.4
PHGDH-211ENST00000641213 WDCPQ9H6R7 721 aa17.53■□□□□ 0.4
PHGDH-211ENST00000641213 NOD2Q9HC29 1040 aa17.53■□□□□ 0.4
PHGDH-211ENST00000641213 PCMTD2Q9NV79 361 aa17.53■□□□□ 0.4
PHGDH-211ENST00000641213 CASP8AP2Q9UKL3 1982 aa17.53■□□□□ 0.4
PHGDH-211ENST00000641213 FRMPD3Q5JV73 1810 aa17.53■□□□□ 0.4
PHGDH-211ENST00000641213 A0A0U1RQF3 1178 aa17.52■□□□□ 0.4
PHGDH-211ENST00000641213 NCAM2O15394 837 aa17.52■□□□□ 0.4
PHGDH-211ENST00000641213 T-ENOLP0DO92 83 aa17.52■□□□□ 0.4
PHGDH-211ENST00000641213 TARSP26639 723 aaKnown RBP17.52■□□□□ 0.4
PHGDH-211ENST00000641213 FLT3LGP49771 235 aa17.52■□□□□ 0.4
PHGDH-211ENST00000641213 SREBF2Q12772 1141 aa17.52■□□□□ 0.4
PHGDH-211ENST00000641213 CRYMQ14894 314 aa17.52■□□□□ 0.4
PHGDH-211ENST00000641213 KCNA10Q16322 511 aa17.52■□□□□ 0.4
PHGDH-211ENST00000641213 SPDYAQ5MJ70 313 aa17.52■□□□□ 0.4
PHGDH-211ENST00000641213 MTDHQ86UE4 582 aaKnown RBP17.52■□□□□ 0.4
PHGDH-211ENST00000641213 NDUFAF2Q8N183 169 aa17.52■□□□□ 0.4
PHGDH-211ENST00000641213 MAGEC3Q8TD91 643 aa17.52■□□□□ 0.4
PHGDH-211ENST00000641213 HASPINQ8TF76 798 aa17.52■□□□□ 0.4
PHGDH-211ENST00000641213 PKMYT1Q99640 499 aa17.52■□□□□ 0.4
PHGDH-211ENST00000641213 MECRQ9BV79 373 aa17.52■□□□□ 0.4
PHGDH-211ENST00000641213 TKTL2Q9H0I9 626 aa17.52■□□□□ 0.4
PHGDH-211ENST00000641213 KCNK13Q9HB14 408 aa17.52■□□□□ 0.4
PHGDH-211ENST00000641213 XPNPEP3Q9NQH7 507 aa17.52■□□□□ 0.4
PHGDH-211ENST00000641213 TMLHEQ9NVH6 421 aa17.52■□□□□ 0.4
PHGDH-211ENST00000641213 KLHL8Q9P2G9 620 aaPredicted RBP17.52■□□□□ 0.4
PHGDH-211ENST00000641213 SLC17A6Q9P2U8 582 aa17.52■□□□□ 0.4
PHGDH-211ENST00000641213 OR12D3Q9UGF7 316 aa17.52■□□□□ 0.4
PHGDH-211ENST00000641213 BAIAP2L1Q9UHR4 511 aa17.52■□□□□ 0.4
PHGDH-211ENST00000641213 ZFP69BQ9UJL9 534 aa17.52■□□□□ 0.4
PHGDH-211ENST00000641213 HAO1Q9UJM8 370 aa17.52■□□□□ 0.4
PHGDH-211ENST00000641213 SNX10Q9Y5X0 201 aa17.52■□□□□ 0.4
PHGDH-211ENST00000641213 NUMBLQ9Y6R0 609 aa17.52■□□□□ 0.4
PHGDH-211ENST00000641213 A0A0G2JND7 137 aa17.52■□□□□ 0.39
PHGDH-211ENST00000641213 ZNF189O75820 626 aaPredicted RBP17.52■□□□□ 0.39
PHGDH-211ENST00000641213 MYCNP04198 464 aaPredicted RBP17.52■□□□□ 0.39
PHGDH-211ENST00000641213 CRHR1P34998 444 aa17.52■□□□□ 0.39
PHGDH-211ENST00000641213 CACNB2Q08289 660 aaPredicted RBP17.52■□□□□ 0.39
PHGDH-211ENST00000641213 LPIN1Q14693 890 aa17.52■□□□□ 0.39
PHGDH-211ENST00000641213 TAF1BQ53T94 588 aaPredicted RBP17.52■□□□□ 0.39
PHGDH-211ENST00000641213 NAT9Q9BTE0 207 aa17.52■□□□□ 0.39
PHGDH-211ENST00000641213 TTC3P53804 2025 aa17.51■□□□□ 0.39
PHGDH-211ENST00000641213 M0QZQ0 153 aa17.51■□□□□ 0.39
PHGDH-211ENST00000641213 CA12O43570 354 aa17.51■□□□□ 0.39
PHGDH-211ENST00000641213 GRIK3Q13003 919 aa17.51■□□□□ 0.39
PHGDH-211ENST00000641213 OLIG2Q13516 323 aa17.51■□□□□ 0.39
PHGDH-211ENST00000641213 TAC4Q86UU9 113 aa17.51■□□□□ 0.39
PHGDH-211ENST00000641213 CDKL2Q92772 493 aa17.51■□□□□ 0.39
PHGDH-211ENST00000641213 TMEM209Q96SK2 561 aa17.51■□□□□ 0.39
PHGDH-211ENST00000641213 ADAM2Q99965 735 aa17.51■□□□□ 0.39
PHGDH-211ENST00000641213 LRMDAQ9H2I8 198 aa17.51■□□□□ 0.39
PHGDH-211ENST00000641213 STK38LQ9Y2H1 464 aa17.51■□□□□ 0.39
PHGDH-211ENST00000641213 INPP5FQ9Y2H2 1132 aa17.51■□□□□ 0.39
PHGDH-211ENST00000641213 DLDP09622 509 aaKnown RBP17.51■□□□□ 0.39
PHGDH-211ENST00000641213 ARFIP2P53365 341 aa17.51■□□□□ 0.39
PHGDH-211ENST00000641213 PACS1Q6VY07 963 aa17.51■□□□□ 0.39
PHGDH-211ENST00000641213 CLNKQ7Z7G1 428 aa17.51■□□□□ 0.39
PHGDH-211ENST00000641213 LRRTM3Q86VH5 581 aa17.51■□□□□ 0.39
PHGDH-211ENST00000641213 TRIM42Q8IWZ5 723 aa17.51■□□□□ 0.39
PHGDH-211ENST00000641213 SCML4Q8N228 414 aa17.51■□□□□ 0.39
PHGDH-211ENST00000641213 SMC1BQ8NDV3 1235 aa17.51■□□□□ 0.39
PHGDH-211ENST00000641213 OR52K1Q8NGK4 314 aa17.51■□□□□ 0.39
PHGDH-211ENST00000641213 OR10T2Q8NGX3 314 aa17.51■□□□□ 0.39
PHGDH-211ENST00000641213 HDAC11Q96DB2 347 aa17.51■□□□□ 0.39
PHGDH-211ENST00000641213 TMEM237Q96Q45 408 aa17.51■□□□□ 0.39
PHGDH-211ENST00000641213 ZIC5Q96T25 663 aa17.51■□□□□ 0.39
PHGDH-211ENST00000641213 EPAS1Q99814 870 aa17.51■□□□□ 0.39
PHGDH-211ENST00000641213 BRD8Q9H0E9 1235 aa17.51■□□□□ 0.39
PHGDH-211ENST00000641213 DMAP1Q9NPF5 467 aaPredicted RBP17.51■□□□□ 0.39
PHGDH-211ENST00000641213 SIRPGQ9P1W8 387 aa17.51■□□□□ 0.39
PHGDH-211ENST00000641213 ZBTB24O43167 697 aaPredicted RBP17.5■□□□□ 0.39
PHGDH-211ENST00000641213 LRIG2O94898 1065 aa17.5■□□□□ 0.39
PHGDH-211ENST00000641213 AP2A1O95782 977 aa17.5■□□□□ 0.39
PHGDH-211ENST00000641213 ZNF135P52742 658 aaPredicted RBP17.5■□□□□ 0.39
PHGDH-211ENST00000641213 GALNT2Q10471 571 aa17.5■□□□□ 0.39
PHGDH-211ENST00000641213 TUSC3Q13454 348 aa17.5■□□□□ 0.39
PHGDH-211ENST00000641213 NAB1Q13506 487 aa17.5■□□□□ 0.39
PHGDH-211ENST00000641213 STKLD1Q8NE28 680 aa17.5■□□□□ 0.39
PHGDH-211ENST00000641213 KLHDC9Q8NEP7 349 aa17.5■□□□□ 0.39
PHGDH-211ENST00000641213 RSPH1Q8WYR4 309 aa17.5■□□□□ 0.39
PHGDH-211ENST00000641213 E2F7Q96AV8 911 aa17.5■□□□□ 0.39
PHGDH-211ENST00000641213 AGAP3Q96P47 875 aa17.5■□□□□ 0.39
PHGDH-211ENST00000641213 TMEM120AQ9BXJ8 343 aa17.5■□□□□ 0.39
PHGDH-211ENST00000641213 DSEQ9UL01 958 aa17.5■□□□□ 0.39
PHGDH-211ENST00000641213 PSAT1Q9Y617 370 aa17.5■□□□□ 0.39
PHGDH-211ENST00000641213 CBX6O95503 412 aa17.49■□□□□ 0.39
PHGDH-211ENST00000641213 TOP3BO95985 862 aaKnown RBP17.49■□□□□ 0.39
PHGDH-211ENST00000641213 ITGB1P05556 798 aa17.49■□□□□ 0.39
PHGDH-211ENST00000641213 POLBP06746 335 aa17.49■□□□□ 0.39
PHGDH-211ENST00000641213 EPHB2P29323 1055 aa17.49■□□□□ 0.39
PHGDH-211ENST00000641213 CCND3P30281 292 aaPredicted RBP17.49■□□□□ 0.39
PHGDH-211ENST00000641213 CD68P34810 354 aaPredicted RBP17.49■□□□□ 0.39
PHGDH-211ENST00000641213 GARSP41250 739 aaKnown RBP17.49■□□□□ 0.39
PHGDH-211ENST00000641213 TM4SF4P48230 202 aa17.49■□□□□ 0.39
PHGDH-211ENST00000641213 BST1Q10588 318 aa17.49■□□□□ 0.39
PHGDH-211ENST00000641213 CTC1Q2NKJ3 1217 aa17.49■□□□□ 0.39
PHGDH-211ENST00000641213 SWT1Q5T5J6 900 aaKnown RBP17.49■□□□□ 0.39
PHGDH-211ENST00000641213 CES4AQ5XG92 561 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms