RNA–Protein interactions for RNA: ENST00000640872.1

PAX6-280, Transcript of paired box 6, humanhuman

TSL 1 (best)

Gene PAX6, Length 2,367 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-280ENST00000640872 CASC4Q6P4E1 433 aa14.04□□□□□ -0.16
PAX6-280ENST00000640872 KCNT2Q6UVM3 1135 aa14.04□□□□□ -0.16
PAX6-280ENST00000640872 OLFML1Q6UWY5 402 aa14.04□□□□□ -0.16
PAX6-280ENST00000640872 ISLR2Q6UXK2 745 aa14.04□□□□□ -0.16
PAX6-280ENST00000640872 DPH6Q7L8W6 267 aa14.04□□□□□ -0.16
PAX6-280ENST00000640872 ZFP28Q8NHY6 868 aa14.04□□□□□ -0.16
PAX6-280ENST00000640872 TRPM4Q8TD43 1214 aa14.04□□□□□ -0.16
PAX6-280ENST00000640872 CLMNQ96JQ2 1002 aa14.04□□□□□ -0.16
PAX6-280ENST00000640872 ACAD9Q9H845 621 aa14.04□□□□□ -0.16
PAX6-280ENST00000640872 CYP3A43Q9HB55 503 aa14.04□□□□□ -0.16
PAX6-280ENST00000640872 ZNF358Q9NW07 568 aa14.04□□□□□ -0.16
PAX6-280ENST00000640872 CIDEBQ9UHD4 219 aa14.04□□□□□ -0.16
PAX6-280ENST00000640872 SCN4AP35499 1836 aa14.03□□□□□ -0.16
PAX6-280ENST00000640872 CAPNS1P04632 268 aa14.03□□□□□ -0.16
PAX6-280ENST00000640872 ITGB3P05106 788 aa14.03□□□□□ -0.16
PAX6-280ENST00000640872 SRGAP2BP0DMP2 458 aa14.03□□□□□ -0.16
PAX6-280ENST00000640872 PGAM1P18669 254 aa14.03□□□□□ -0.16
PAX6-280ENST00000640872 MAGEA12P43365 314 aa14.03□□□□□ -0.16
PAX6-280ENST00000640872 HMGCS2P54868 508 aa14.03□□□□□ -0.16
PAX6-280ENST00000640872 GK3PQ14409 553 aa14.03□□□□□ -0.16
PAX6-280ENST00000640872 CCDC153Q494R4 210 aa14.03□□□□□ -0.16
PAX6-280ENST00000640872 ATF7IP2Q5U623 682 aa14.03□□□□□ -0.16
PAX6-280ENST00000640872 LRRC8BQ6P9F7 803 aa14.03□□□□□ -0.16
PAX6-280ENST00000640872 LCLAT1Q6UWP7 414 aa14.03□□□□□ -0.16
PAX6-280ENST00000640872 ADCY4Q8NFM4 1077 aa14.03□□□□□ -0.16
PAX6-280ENST00000640872 IRGQQ8WZA9 623 aa14.03□□□□□ -0.16
PAX6-280ENST00000640872 KHSRPQ92945 711 aaKnown RBP eCLIP14.03□□□□□ -0.16
PAX6-280ENST00000640872 LRGUKQ96M69 825 aa14.03□□□□□ -0.16
PAX6-280ENST00000640872 OR52B2Q96RD2 323 aa14.03□□□□□ -0.16
PAX6-280ENST00000640872 WRNIP1Q96S55 665 aa14.03□□□□□ -0.16
PAX6-280ENST00000640872 VPS28Q9UK41 221 aa14.03□□□□□ -0.16
PAX6-280ENST00000640872 FZD9O00144 591 aa14.03□□□□□ -0.16
PAX6-280ENST00000640872 B4GALT5O43286 388 aa14.03□□□□□ -0.16
PAX6-280ENST00000640872 IL18RAPO95256 599 aa14.03□□□□□ -0.16
PAX6-280ENST00000640872 UBA1P22314 1058 aaKnown RBP14.03□□□□□ -0.16
PAX6-280ENST00000640872 MGAT1P26572 445 aa14.03□□□□□ -0.16
PAX6-280ENST00000640872 PIK3R1P27986 724 aa14.03□□□□□ -0.16
PAX6-280ENST00000640872 TYK2P29597 1187 aa14.03□□□□□ -0.16
PAX6-280ENST00000640872 SDC4P31431 198 aa14.03□□□□□ -0.16
PAX6-280ENST00000640872 NUDT2P50583 147 aa14.03□□□□□ -0.16
PAX6-280ENST00000640872 STAT5BP51692 787 aa14.03□□□□□ -0.16
PAX6-280ENST00000640872 THOP1P52888 689 aa14.03□□□□□ -0.16
PAX6-280ENST00000640872 HDAC4P56524 1084 aa14.03□□□□□ -0.16
PAX6-280ENST00000640872 STXBP2Q15833 593 aa14.03□□□□□ -0.16
PAX6-280ENST00000640872 ZNF423Q2M1K9 1284 aa14.03□□□□□ -0.16
PAX6-280ENST00000640872 ZFP1Q6P2D0 407 aa14.03□□□□□ -0.16
PAX6-280ENST00000640872 BORAQ6PGQ7 559 aa14.03□□□□□ -0.16
PAX6-280ENST00000640872 NAPRTQ6XQN6 538 aa14.03□□□□□ -0.16
PAX6-280ENST00000640872 CDR2LQ86X02 465 aaPredicted RBP14.03□□□□□ -0.16
PAX6-280ENST00000640872 CATSPER1Q8NEC5 780 aa14.03□□□□□ -0.16
PAX6-280ENST00000640872 NLGN2Q8NFZ4 835 aa14.03□□□□□ -0.16
PAX6-280ENST00000640872 ISL2Q96A47 359 aa14.03□□□□□ -0.16
PAX6-280ENST00000640872 SERPINI1Q99574 410 aa14.03□□□□□ -0.16
PAX6-280ENST00000640872 VRTNQ9H8Y1 702 aa14.03□□□□□ -0.16
PAX6-280ENST00000640872 TSPAN16Q9UKR8 245 aa14.03□□□□□ -0.16
PAX6-280ENST00000640872 PTPRFP10586 1907 aa14.03□□□□□ -0.16
PAX6-280ENST00000640872 FARP2O94887 1054 aaPredicted RBP14.02□□□□□ -0.16
PAX6-280ENST00000640872 THRAP10827 490 aa14.02□□□□□ -0.16
PAX6-280ENST00000640872 PTPRAP18433 802 aa14.02□□□□□ -0.16
PAX6-280ENST00000640872 XRCC1P18887 633 aaPredicted RBP14.02□□□□□ -0.16
PAX6-280ENST00000640872 NR2C2P49116 596 aa14.02□□□□□ -0.16
PAX6-280ENST00000640872 BACE1P56817 501 aa14.02□□□□□ -0.16
PAX6-280ENST00000640872 MRPS22P82650 360 aaKnown RBP14.02□□□□□ -0.16
PAX6-280ENST00000640872 DPYSL2Q16555 572 aa14.02□□□□□ -0.16
PAX6-280ENST00000640872 HSP90AA5PQ58FG0 334 aa14.02□□□□□ -0.16
PAX6-280ENST00000640872 PIGGQ5H8A4 983 aa14.02□□□□□ -0.16
PAX6-280ENST00000640872 HEATR6Q6AI08 1181 aaKnown RBP14.02□□□□□ -0.16
PAX6-280ENST00000640872 KLC3Q6P597 504 aa14.02□□□□□ -0.16
PAX6-280ENST00000640872 C16orf89Q6UX73 402 aa14.02□□□□□ -0.16
PAX6-280ENST00000640872 FAM43BQ6ZT52 329 aaPredicted RBP14.02□□□□□ -0.16
PAX6-280ENST00000640872 LILRA2Q8N149 483 aa14.02□□□□□ -0.16
PAX6-280ENST00000640872 KBTBD7Q8WVZ9 684 aa14.02□□□□□ -0.16
PAX6-280ENST00000640872 CNDP1Q96KN2 507 aa14.02□□□□□ -0.16
PAX6-280ENST00000640872 CNBD2Q96M20 576 aa14.02□□□□□ -0.16
PAX6-280ENST00000640872 CDT1Q9H211 546 aa14.02□□□□□ -0.16
PAX6-280ENST00000640872 RPF1Q9H9Y2 349 aaKnown RBP14.02□□□□□ -0.16
PAX6-280ENST00000640872 SNX15Q9NRS6 342 aa14.02□□□□□ -0.16
PAX6-280ENST00000640872 DNAAF2Q9NVR5 837 aaKnown RBP14.02□□□□□ -0.16
PAX6-280ENST00000640872 CHCHD3Q9NX63 227 aaKnown RBP14.02□□□□□ -0.16
PAX6-280ENST00000640872 APPL1Q9UKG1 709 aa14.02□□□□□ -0.16
PAX6-280ENST00000640872 NR2E3Q9Y5X4 410 aa14.02□□□□□ -0.16
PAX6-280ENST00000640872 BRCA1P38398 1863 aaKnown RBP14.02□□□□□ -0.17
PAX6-280ENST00000640872 LOC285556D6RIA3 1793 aa14.02□□□□□ -0.17
PAX6-280ENST00000640872 A0A0A0MRY4 1105 aa14.02□□□□□ -0.17
PAX6-280ENST00000640872 TMEM114B3SHH9 223 aa14.02□□□□□ -0.17
PAX6-280ENST00000640872 G3V2L1 256 aa14.02□□□□□ -0.17
PAX6-280ENST00000640872 ACKR2O00590 384 aa14.02□□□□□ -0.17
PAX6-280ENST00000640872 AIM2O14862 343 aa14.02□□□□□ -0.17
PAX6-280ENST00000640872 HSPA4LO95757 839 aa14.02□□□□□ -0.17
PAX6-280ENST00000640872 CDK4P11802 303 aa14.02□□□□□ -0.17
PAX6-280ENST00000640872 ATP6V1B1P15313 513 aa14.02□□□□□ -0.17
PAX6-280ENST00000640872 RPS12P25398 132 aaKnown RBP14.02□□□□□ -0.17
PAX6-280ENST00000640872 GP5P40197 560 aa14.02□□□□□ -0.17
PAX6-280ENST00000640872 RGS7P49802 495 aa14.02□□□□□ -0.17
PAX6-280ENST00000640872 SESN2P58004 480 aaPredicted RBP14.02□□□□□ -0.17
PAX6-280ENST00000640872 INCA1Q0VD86 236 aa14.02□□□□□ -0.17
PAX6-280ENST00000640872 FLOT2Q14254 428 aa14.02□□□□□ -0.17
PAX6-280ENST00000640872 MXD4Q14582 209 aaPredicted RBP14.02□□□□□ -0.17
PAX6-280ENST00000640872 CMC1Q7Z7K0 106 aa14.02□□□□□ -0.17
PAX6-280ENST00000640872 SNX32Q86XE0 403 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms