RNA–Protein interactions for RNA: ENST00000640209.1

NECAP1-225, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 2,473 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-225ENST00000640209 WDR60Q8WVS4 1066 aa9.61□□□□□ -0.87
NECAP1-225ENST00000640209 KCTD13Q8WZ19 329 aa9.61□□□□□ -0.87
NECAP1-225ENST00000640209 SENP8Q96LD8 212 aa9.61□□□□□ -0.87
NECAP1-225ENST00000640209 RCOR3Q9P2K3 495 aaPredicted RBP9.61□□□□□ -0.87
NECAP1-225ENST00000640209 PPARGC1AQ9UBK2 798 aaKnown RBP9.61□□□□□ -0.87
NECAP1-225ENST00000640209 MAGED2Q9UNF1 606 aaPredicted RBP9.61□□□□□ -0.87
NECAP1-225ENST00000640209 CCDC22O60826 627 aa9.61□□□□□ -0.87
NECAP1-225ENST00000640209 FGF3P11487 239 aaPredicted RBP9.61□□□□□ -0.87
NECAP1-225ENST00000640209 PGAM1P18669 254 aa9.61□□□□□ -0.87
NECAP1-225ENST00000640209 PTPN3P26045 913 aa9.61□□□□□ -0.87
NECAP1-225ENST00000640209 ADRA1BP35368 520 aa9.61□□□□□ -0.87
NECAP1-225ENST00000640209 DAOAP59103 153 aa9.61□□□□□ -0.87
NECAP1-225ENST00000640209 MAP2K5Q13163 448 aa9.61□□□□□ -0.87
NECAP1-225ENST00000640209 SEMA3BQ13214 749 aa9.61□□□□□ -0.87
NECAP1-225ENST00000640209 KPNB1Q14974 876 aaKnown RBP9.61□□□□□ -0.87
NECAP1-225ENST00000640209 PCBP1Q15365 356 aaKnown RBP eCLIP9.61□□□□□ -0.87
NECAP1-225ENST00000640209 WASHC2DQ5SRD0 308 aa9.61□□□□□ -0.87
NECAP1-225ENST00000640209 MBLAC2Q68D91 279 aa9.61□□□□□ -0.87
NECAP1-225ENST00000640209 CYS1Q717R9 158 aa9.61□□□□□ -0.87
NECAP1-225ENST00000640209 BHLHA9Q7RTU4 235 aa9.61□□□□□ -0.87
NECAP1-225ENST00000640209 PID1Q7Z2X4 250 aa9.61□□□□□ -0.87
NECAP1-225ENST00000640209 SHKBP1Q8TBC3 707 aa9.61□□□□□ -0.87
NECAP1-225ENST00000640209 EDEM1Q92611 657 aa9.61□□□□□ -0.87
NECAP1-225ENST00000640209 UPF1Q92900 1129 aaKnown RBP eCLIP9.61□□□□□ -0.874e-7■■■□□ 15.7
NECAP1-225ENST00000640209 PCED1BQ96HM7 432 aa9.61□□□□□ -0.87
NECAP1-225ENST00000640209 GAD1Q99259 594 aa9.61□□□□□ -0.87
NECAP1-225ENST00000640209 CXorf56Q9H5V9 222 aa9.61□□□□□ -0.87
NECAP1-225ENST00000640209 EIF2B3Q9NR50 452 aaKnown RBP9.61□□□□□ -0.87
NECAP1-225ENST00000640209 KCNK4Q9NYG8 393 aa9.61□□□□□ -0.87
NECAP1-225ENST00000640209 MRPL42Q9Y6G3 142 aaKnown RBP9.61□□□□□ -0.87
NECAP1-225ENST00000640209 NUP205Q92621 2012 aa9.61□□□□□ -0.87
NECAP1-225ENST00000640209 C17orf102A2RUQ5 167 aa9.6□□□□□ -0.87
NECAP1-225ENST00000640209 GYG2O15488 501 aa9.6□□□□□ -0.87
NECAP1-225ENST00000640209 XPOTO43592 962 aaKnown RBP9.6□□□□□ -0.87
NECAP1-225ENST00000640209 AP1G2O75843 785 aa9.6□□□□□ -0.87
NECAP1-225ENST00000640209 TOMM70O94826 608 aa9.6□□□□□ -0.87
NECAP1-225ENST00000640209 ENO1P06733 434 aaKnown RBP9.6□□□□□ -0.87
NECAP1-225ENST00000640209 ITGA2BP08514 1039 aa9.6□□□□□ -0.87
NECAP1-225ENST00000640209 FAM200BP0CF97 657 aa9.6□□□□□ -0.87
NECAP1-225ENST00000640209 ESRRAP11474 423 aaPredicted RBP9.6□□□□□ -0.87
NECAP1-225ENST00000640209 CYP2B6P20813 491 aa9.6□□□□□ -0.87
NECAP1-225ENST00000640209 CD68P34810 354 aaPredicted RBP9.6□□□□□ -0.87
NECAP1-225ENST00000640209 CLCNKBP51801 687 aa9.6□□□□□ -0.87
NECAP1-225ENST00000640209 CCNG1P51959 295 aa9.6□□□□□ -0.87
NECAP1-225ENST00000640209 ZBTB17Q13105 803 aa9.6□□□□□ -0.87
NECAP1-225ENST00000640209 UBAP2LQ14157 1087 aaKnown RBP9.6□□□□□ -0.87
NECAP1-225ENST00000640209 PDK1Q15118 436 aa9.6□□□□□ -0.87
NECAP1-225ENST00000640209 ACSBG2Q5FVE4 666 aa9.6□□□□□ -0.87
NECAP1-225ENST00000640209 TEDDM1Q5T9Z0 273 aa9.6□□□□□ -0.87
NECAP1-225ENST00000640209 ATG16L1Q676U5 607 aa9.6□□□□□ -0.87
NECAP1-225ENST00000640209 CMC1Q7Z7K0 106 aa9.6□□□□□ -0.87
NECAP1-225ENST00000640209 FAM35AQ86V20 835 aa9.6□□□□□ -0.87
NECAP1-225ENST00000640209 PSTKQ8IV42 348 aaKnown RBP9.6□□□□□ -0.87
NECAP1-225ENST00000640209 ENDOVQ8N8Q3 282 aaKnown RBP9.6□□□□□ -0.87
NECAP1-225ENST00000640209 APOL2Q9BQE5 337 aa9.6□□□□□ -0.87
NECAP1-225ENST00000640209 SYT15Q9BQS2 421 aa9.6□□□□□ -0.87
NECAP1-225ENST00000640209 TSPYL2Q9H2G4 693 aaPredicted RBP9.6□□□□□ -0.87
NECAP1-225ENST00000640209 BRCA2P51587 3418 aa9.6□□□□□ -0.87
NECAP1-225ENST00000640209 EIF4E1BA6NMX2 242 aaKnown RBP9.6□□□□□ -0.87
NECAP1-225ENST00000640209 HHLA1C9JL84 531 aa9.6□□□□□ -0.87
NECAP1-225ENST00000640209 ZBTB24O43167 697 aaPredicted RBP9.6□□□□□ -0.87
NECAP1-225ENST00000640209 PLIN3O60664 434 aa9.6□□□□□ -0.87
NECAP1-225ENST00000640209 KRT36O76013 467 aa9.6□□□□□ -0.87
NECAP1-225ENST00000640209 YY1P25490 414 aa9.6□□□□□ -0.87
NECAP1-225ENST00000640209 PGGT1BP53609 377 aa9.6□□□□□ -0.87
NECAP1-225ENST00000640209 CLNS1AP54105 237 aaKnown RBP9.6□□□□□ -0.87
NECAP1-225ENST00000640209 SARNPP82979 210 aaKnown RBP9.6□□□□□ -0.87
NECAP1-225ENST00000640209 IFRD2Q12894 506 aaPredicted RBP9.6□□□□□ -0.87
NECAP1-225ENST00000640209 STX3Q13277 289 aa9.6□□□□□ -0.87
NECAP1-225ENST00000640209 PCLAFQ15004 111 aa9.6□□□□□ -0.87
NECAP1-225ENST00000640209 MAVSQ7Z434 540 aa9.6□□□□□ -0.87
NECAP1-225ENST00000640209 RASSF3Q86WH2 238 aa9.6□□□□□ -0.87
NECAP1-225ENST00000640209 PLD6Q8N2A8 252 aaKnown RBP9.6□□□□□ -0.87
NECAP1-225ENST00000640209 ACVR1CQ8NER5 493 aa9.6□□□□□ -0.87
NECAP1-225ENST00000640209 APBB2Q92870 758 aa9.6□□□□□ -0.87
NECAP1-225ENST00000640209 ATXN7L3BQ96GX2 97 aa9.6□□□□□ -0.87
NECAP1-225ENST00000640209 MYCBPQ99417 103 aaPredicted RBP9.6□□□□□ -0.87
NECAP1-225ENST00000640209 AGAP2Q99490 1192 aa9.6□□□□□ -0.87
NECAP1-225ENST00000640209 MLPHQ9BV36 600 aaPredicted RBP9.6□□□□□ -0.87
NECAP1-225ENST00000640209 TMEM216Q9P0N5 145 aa9.6□□□□□ -0.87
NECAP1-225ENST00000640209 KLHL8Q9P2G9 620 aaPredicted RBP9.6□□□□□ -0.87
NECAP1-225ENST00000640209 IGSF9Q9P2J2 1179 aa9.6□□□□□ -0.87
NECAP1-225ENST00000640209 STAP1Q9ULZ2 295 aa9.6□□□□□ -0.87
NECAP1-225ENST00000640209 RPS6KL1Q9Y6S9 549 aa9.6□□□□□ -0.87
NECAP1-225ENST00000640209 CASTOR2A6NHX0 329 aa9.59□□□□□ -0.87
NECAP1-225ENST00000640209 BIRC5O15392 142 aa9.59□□□□□ -0.87
NECAP1-225ENST00000640209 CTSHP09668 335 aa9.59□□□□□ -0.87
NECAP1-225ENST00000640209 NCAM1P13591 858 aa9.59□□□□□ -0.87
NECAP1-225ENST00000640209 ABL2P42684 1182 aa9.59□□□□□ -0.87
NECAP1-225ENST00000640209 ALDH18A1P54886 795 aaKnown RBP9.59□□□□□ -0.87
NECAP1-225ENST00000640209 TUBB3Q13509 450 aa9.59□□□□□ -0.87
NECAP1-225ENST00000640209 CERCAMQ5T4B2 595 aa9.59□□□□□ -0.87
NECAP1-225ENST00000640209 FAM91A1Q658Y4 838 aa9.59□□□□□ -0.87
NECAP1-225ENST00000640209 BZW1Q7L1Q6 419 aaKnown RBP9.59□□□□□ -0.87
NECAP1-225ENST00000640209 CRLF3Q8IUI8 442 aa9.59□□□□□ -0.87
NECAP1-225ENST00000640209 C10orf107Q8IVU9 208 aa9.59□□□□□ -0.87
NECAP1-225ENST00000640209 TRIM42Q8IWZ5 723 aa9.59□□□□□ -0.87
NECAP1-225ENST00000640209 HACE1Q8IYU2 909 aa9.59□□□□□ -0.87
NECAP1-225ENST00000640209 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP9.59□□□□□ -0.87
NECAP1-225ENST00000640209 CLPTM1LQ96KA5 538 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms