RNA–Protein interactions for RNA: ENST00000640076.1

SCARB2-220, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 1,991 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-220ENST00000640076 FAPQ12884 760 aa8.31□□□□□ -1.08
SCARB2-220ENST00000640076 MAMLD1Q13495 774 aa8.31□□□□□ -1.08
SCARB2-220ENST00000640076 ZNF268Q14587 947 aaPredicted RBP8.31□□□□□ -1.08
SCARB2-220ENST00000640076 ARSJQ5FYB0 599 aaPredicted RBP8.31□□□□□ -1.08
SCARB2-220ENST00000640076 TTC9BQ8N6N2 239 aa8.31□□□□□ -1.08
SCARB2-220ENST00000640076 C3orf20Q8ND61 904 aa8.31□□□□□ -1.08
SCARB2-220ENST00000640076 C1orf162Q8NEQ5 155 aaPredicted RBP8.31□□□□□ -1.08
SCARB2-220ENST00000640076 SPPL3Q8TCT6 385 aa8.31□□□□□ -1.08
SCARB2-220ENST00000640076 SPPL2BQ8TCT7 592 aa8.31□□□□□ -1.08
SCARB2-220ENST00000640076 C2orf15Q8WU43 125 aaKnown RBP8.31□□□□□ -1.08
SCARB2-220ENST00000640076 KCTD13Q8WZ19 329 aa8.31□□□□□ -1.08
SCARB2-220ENST00000640076 MCRS1Q96EZ8 462 aa8.31□□□□□ -1.08
SCARB2-220ENST00000640076 SGCZQ96LD1 299 aa8.31□□□□□ -1.08
SCARB2-220ENST00000640076 SAMD11Q96NU1 681 aa8.31□□□□□ -1.08
SCARB2-220ENST00000640076 TGS1Q96RS0 853 aaKnown RBP8.31□□□□□ -1.08
SCARB2-220ENST00000640076 C11orf84Q9BUA3 381 aaPredicted RBP8.31□□□□□ -1.08
SCARB2-220ENST00000640076 NUP85Q9BW27 656 aa8.31□□□□□ -1.08
SCARB2-220ENST00000640076 MIS12Q9H081 205 aa8.31□□□□□ -1.08
SCARB2-220ENST00000640076 ZNF395Q9H8N7 513 aaPredicted RBP8.31□□□□□ -1.08
SCARB2-220ENST00000640076 RXFP1Q9HBX9 757 aa8.31□□□□□ -1.08
SCARB2-220ENST00000640076 PNPLA8Q9NP80 782 aa8.31□□□□□ -1.08
SCARB2-220ENST00000640076 SCUBE2Q9NQ36 999 aa8.31□□□□□ -1.08
SCARB2-220ENST00000640076 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP8.31□□□□□ -1.08
SCARB2-220ENST00000640076 PARVAQ9NVD7 372 aa8.31□□□□□ -1.08
SCARB2-220ENST00000640076 CTTNBP2NLQ9P2B4 639 aa8.31□□□□□ -1.08
SCARB2-220ENST00000640076 WDR35Q9P2L0 1181 aa8.31□□□□□ -1.08
SCARB2-220ENST00000640076 UVRAGQ9P2Y5 699 aa8.31□□□□□ -1.08
SCARB2-220ENST00000640076 SSX2IPQ9Y2D8 614 aa8.31□□□□□ -1.08
SCARB2-220ENST00000640076 CAPN6Q9Y6Q1 641 aa8.31□□□□□ -1.08
SCARB2-220ENST00000640076 TCRBV16S1A1N1A0A5B0 115 aa8.3□□□□□ -1.08
SCARB2-220ENST00000640076 J3KRW8 73 aa8.3□□□□□ -1.08
SCARB2-220ENST00000640076 GRM6O15303 877 aa8.3□□□□□ -1.08
SCARB2-220ENST00000640076 TEX28O15482 410 aa8.3□□□□□ -1.08
SCARB2-220ENST00000640076 PAPSS1O43252 624 aaPredicted RBP8.3□□□□□ -1.08
SCARB2-220ENST00000640076 TLR5O60602 858 aa8.3□□□□□ -1.08
SCARB2-220ENST00000640076 FOSL1P15407 271 aa8.3□□□□□ -1.08
SCARB2-220ENST00000640076 NOP2P46087 812 aaKnown RBP8.3□□□□□ -1.08
SCARB2-220ENST00000640076 ERVFC1P60507 584 aa8.3□□□□□ -1.08
SCARB2-220ENST00000640076 GNG11P61952 73 aa8.3□□□□□ -1.08
SCARB2-220ENST00000640076 ETF1P62495 437 aaKnown RBP8.3□□□□□ -1.08
SCARB2-220ENST00000640076 RELBQ01201 579 aa8.3□□□□□ -1.08
SCARB2-220ENST00000640076 ZNF252P-AS1Q0IIN9 211 aa8.3□□□□□ -1.08
SCARB2-220ENST00000640076 ADIGQ0VDE8 80 aa8.3□□□□□ -1.08
SCARB2-220ENST00000640076 DUSP4Q13115 394 aa8.3□□□□□ -1.08
SCARB2-220ENST00000640076 RAB30Q15771 203 aa8.3□□□□□ -1.08
SCARB2-220ENST00000640076 FAM133BQ5BKY9 247 aaKnown RBP8.3□□□□□ -1.08
SCARB2-220ENST00000640076 RAB41Q5JT25 222 aa8.3□□□□□ -1.08
SCARB2-220ENST00000640076 DNAJC24Q6P3W2 148 aa8.3□□□□□ -1.08
SCARB2-220ENST00000640076 OLFML1Q6UWY5 402 aa8.3□□□□□ -1.08
SCARB2-220ENST00000640076 FAM183BPQ6ZVS7 135 aa8.3□□□□□ -1.08
SCARB2-220ENST00000640076 OTOP3Q7RTS5 596 aa8.3□□□□□ -1.08
SCARB2-220ENST00000640076 GPRIN1Q7Z2K8 1008 aa8.3□□□□□ -1.08
SCARB2-220ENST00000640076 KIF18BQ86Y91 864 aa8.3□□□□□ -1.08
SCARB2-220ENST00000640076 TDHQ8IZJ6 230 aa8.3□□□□□ -1.08
SCARB2-220ENST00000640076 ZNF461Q8TAF7 563 aa8.3□□□□□ -1.08
SCARB2-220ENST00000640076 ZNF564Q8TBZ8 553 aaPredicted RBP8.3□□□□□ -1.08
SCARB2-220ENST00000640076 CCT6BQ92526 530 aa8.3□□□□□ -1.08
SCARB2-220ENST00000640076 PIWIL1Q96J94 861 aaKnown RBP8.3□□□□□ -1.08
SCARB2-220ENST00000640076 TCF25Q9BQ70 676 aa8.3□□□□□ -1.08
SCARB2-220ENST00000640076 TRIM7Q9C029 511 aa8.3□□□□□ -1.08
SCARB2-220ENST00000640076 CRISPLD1Q9H336 500 aa8.3□□□□□ -1.08
SCARB2-220ENST00000640076 PRO3102Q9H379 93 aa8.3□□□□□ -1.08
SCARB2-220ENST00000640076 LRRC4Q9HBW1 653 aa8.3□□□□□ -1.08
SCARB2-220ENST00000640076 MRPL47Q9HD33 250 aaKnown RBP8.3□□□□□ -1.08
SCARB2-220ENST00000640076 TLR9Q9NR96 1032 aa8.3□□□□□ -1.08
SCARB2-220ENST00000640076 REV1Q9UBZ9 1251 aa8.3□□□□□ -1.08
SCARB2-220ENST00000640076 AFF4Q9UHB7 1163 aaKnown RBP8.3□□□□□ -1.08
SCARB2-220ENST00000640076 MSRAQ9UJ68 235 aa8.3□□□□□ -1.08
SCARB2-220ENST00000640076 PCDHGC5Q9Y5F6 944 aa8.3□□□□□ -1.08
SCARB2-220ENST00000640076 IRAK3Q9Y616 596 aa8.3□□□□□ -1.08
SCARB2-220ENST00000640076 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP8.3□□□□□ -1.08
SCARB2-220ENST00000640076 GRID2IPA4D2P6 1211 aa8.3□□□□□ -1.08
SCARB2-220ENST00000640076 A6NCN8 305 aa8.3□□□□□ -1.08
SCARB2-220ENST00000640076 SIGLEC16A6NMB1 481 aa8.3□□□□□ -1.08
SCARB2-220ENST00000640076 GOLGA8SH3BPF8 625 aa8.3□□□□□ -1.08
SCARB2-220ENST00000640076 DNAJA2O60884 412 aa8.3□□□□□ -1.08
SCARB2-220ENST00000640076 CXCL14O95715 111 aa8.3□□□□□ -1.08
SCARB2-220ENST00000640076 CNPP09543 421 aaKnown RBP8.3□□□□□ -1.08
SCARB2-220ENST00000640076 HAPLN1P10915 354 aaPredicted RBP8.3□□□□□ -1.08
SCARB2-220ENST00000640076 LCP1P13796 627 aa8.3□□□□□ -1.08
SCARB2-220ENST00000640076 HSD3B1P14060 373 aa8.3□□□□□ -1.08
SCARB2-220ENST00000640076 GRIK1P39086 918 aa8.3□□□□□ -1.08
SCARB2-220ENST00000640076 TSPAN7P41732 249 aa8.3□□□□□ -1.08
SCARB2-220ENST00000640076 NDUFV1P49821 464 aa8.3□□□□□ -1.08
SCARB2-220ENST00000640076 NAP1L1P55209 391 aaKnown RBP8.3□□□□□ -1.08
SCARB2-220ENST00000640076 HYAL2Q12891 473 aa8.3□□□□□ -1.08
SCARB2-220ENST00000640076 CAMK1Q14012 370 aa8.3□□□□□ -1.08
SCARB2-220ENST00000640076 IFI16Q16666 785 aaKnown RBP8.3□□□□□ -1.08
SCARB2-220ENST00000640076 ZNF569Q5MCW4 686 aa8.3□□□□□ -1.08
SCARB2-220ENST00000640076 PIK3R6Q5UE93 754 aa8.3□□□□□ -1.08
SCARB2-220ENST00000640076 TPGS2Q68CL5 300 aa8.3□□□□□ -1.08
SCARB2-220ENST00000640076 OR6B2Q6IFH4 312 aa8.3□□□□□ -1.08
SCARB2-220ENST00000640076 C1orf122Q6ZSJ8 110 aa8.3□□□□□ -1.08
SCARB2-220ENST00000640076 ZNF227Q86WZ6 799 aa8.3□□□□□ -1.08
SCARB2-220ENST00000640076 ZDHHC17Q8IUH5 632 aa8.3□□□□□ -1.08
SCARB2-220ENST00000640076 SLC41A1Q8IVJ1 513 aa8.3□□□□□ -1.08
SCARB2-220ENST00000640076 SCN4BQ8IWT1 228 aa8.3□□□□□ -1.08
SCARB2-220ENST00000640076 LRRC57Q8N9N7 239 aa8.3□□□□□ -1.08
SCARB2-220ENST00000640076 TRIM58Q8NG06 486 aa8.3□□□□□ -1.08
SCARB2-220ENST00000640076 WDR24Q96S15 920 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms