RNA–Protein interactions for RNA: ENST00000638142.2

SYNGAP1-227, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 2,499 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-227ENST00000638142 DMAP1Q9NPF5 467 aaPredicted RBP20.64■□□□□ 0.89
SYNGAP1-227ENST00000638142 SYBUQ9NX95 663 aa20.64■□□□□ 0.89
SYNGAP1-227ENST00000638142 ADAM28Q9UKQ2 775 aa20.64■□□□□ 0.89
SYNGAP1-227ENST00000638142 SCN1AP35498 2009 aa20.63■□□□□ 0.89
SYNGAP1-227ENST00000638142 CCDC130P13994 396 aa20.63■□□□□ 0.89
SYNGAP1-227ENST00000638142 CPA3P15088 417 aa20.63■□□□□ 0.89
SYNGAP1-227ENST00000638142 ACADSBP45954 432 aa20.63■□□□□ 0.89
SYNGAP1-227ENST00000638142 FSCBQ5H9T9 825 aa20.63■□□□□ 0.89
SYNGAP1-227ENST00000638142 PPM1JQ5JR12 505 aa20.63■□□□□ 0.89
SYNGAP1-227ENST00000638142 SPANXN3Q5MJ09 141 aa20.63■□□□□ 0.89
SYNGAP1-227ENST00000638142 EGFL6Q8IUX8 553 aa20.63■□□□□ 0.89
SYNGAP1-227ENST00000638142 C7orf31Q8N865 590 aa20.63■□□□□ 0.89
SYNGAP1-227ENST00000638142 CERS2Q96G23 380 aa20.63■□□□□ 0.89
SYNGAP1-227ENST00000638142 GORASP1Q9BQQ3 440 aa20.63■□□□□ 0.89
SYNGAP1-227ENST00000638142 EBF3Q9H4W6 596 aa20.63■□□□□ 0.89
SYNGAP1-227ENST00000638142 FZD10Q9ULW2 581 aa20.63■□□□□ 0.89
SYNGAP1-227ENST00000638142 PCDHB12Q9Y5F1 795 aa20.63■□□□□ 0.89
SYNGAP1-227ENST00000638142 CDY2AQ9Y6F7 541 aa20.63■□□□□ 0.89
SYNGAP1-227ENST00000638142 CDY1Q9Y6F8 540 aa20.63■□□□□ 0.89
SYNGAP1-227ENST00000638142 PPEF2O14830 753 aa20.63■□□□□ 0.89
SYNGAP1-227ENST00000638142 LCP1P13796 627 aa20.63■□□□□ 0.89
SYNGAP1-227ENST00000638142 MAGEA12P43365 314 aa20.63■□□□□ 0.89
SYNGAP1-227ENST00000638142 CUL3Q13618 768 aa20.63■□□□□ 0.89
SYNGAP1-227ENST00000638142 ITGA9Q13797 1035 aa20.63■□□□□ 0.89
SYNGAP1-227ENST00000638142 DCAF4L1Q3SXM0 396 aa20.63■□□□□ 0.89
SYNGAP1-227ENST00000638142 PYROXD2Q8N2H3 581 aa20.63■□□□□ 0.89
SYNGAP1-227ENST00000638142 KLHL4Q9C0H6 718 aa20.63■□□□□ 0.89
SYNGAP1-227ENST00000638142 PDGFCQ9NRA1 345 aa20.63■□□□□ 0.89
SYNGAP1-227ENST00000638142 PIH1D1Q9NWS0 290 aaKnown RBP20.63■□□□□ 0.89
SYNGAP1-227ENST00000638142 CSADQ9Y600 493 aa20.63■□□□□ 0.89
SYNGAP1-227ENST00000638142 SF3B1O75533 1304 aaKnown RBP eCLIP20.63■□□□□ 0.899e-9■■■■■ 62.4
SYNGAP1-227ENST00000638142 BRCA1P38398 1863 aaKnown RBP20.63■□□□□ 0.89
SYNGAP1-227ENST00000638142 COL1A2P08123 1366 aa20.62■□□□□ 0.89
SYNGAP1-227ENST00000638142 NCF2P19878 526 aaPredicted RBP20.62■□□□□ 0.89
SYNGAP1-227ENST00000638142 ITGAXP20702 1163 aa20.62■□□□□ 0.89
SYNGAP1-227ENST00000638142 PSMB4P28070 264 aa20.62■□□□□ 0.89
SYNGAP1-227ENST00000638142 GSTT1P30711 240 aa20.62■□□□□ 0.89
SYNGAP1-227ENST00000638142 PDK1Q15118 436 aa20.62■□□□□ 0.89
SYNGAP1-227ENST00000638142 PDCD2Q16342 344 aaPredicted RBP20.62■□□□□ 0.89
SYNGAP1-227ENST00000638142 SLC5A9Q2M3M2 681 aa20.62■□□□□ 0.89
SYNGAP1-227ENST00000638142 BSPRYQ5W0U4 402 aa20.62■□□□□ 0.89
SYNGAP1-227ENST00000638142 PGBD4Q96DM1 585 aa20.62■□□□□ 0.89
SYNGAP1-227ENST00000638142 DPEP3Q9H4B8 488 aa20.62■□□□□ 0.89
SYNGAP1-227ENST00000638142 SNX15Q9NRS6 342 aa20.62■□□□□ 0.89
SYNGAP1-227ENST00000638142 POMPQ9Y244 141 aa20.62■□□□□ 0.89
SYNGAP1-227ENST00000638142 SLC4A7Q9Y6M7 1214 aa20.62■□□□□ 0.89
SYNGAP1-227ENST00000638142 MCM3APO60318 1980 aa20.62■□□□□ 0.89
SYNGAP1-227ENST00000638142 RNASEH1O60930 286 aaKnown RBP20.62■□□□□ 0.89
SYNGAP1-227ENST00000638142 PDE5AO76074 875 aa20.62■□□□□ 0.89
SYNGAP1-227ENST00000638142 ARHGAP1Q07960 439 aa20.62■□□□□ 0.89
SYNGAP1-227ENST00000638142 RNF111Q6ZNA4 994 aa20.62■□□□□ 0.89
SYNGAP1-227ENST00000638142 DEFB107AQ8IZN7 70 aa20.62■□□□□ 0.89
SYNGAP1-227ENST00000638142 SPATA16Q9BXB7 569 aa20.62■□□□□ 0.89
SYNGAP1-227ENST00000638142 IGSF9Q9P2J2 1179 aa20.62■□□□□ 0.89
SYNGAP1-227ENST00000638142 TBC1D30Q9Y2I9 924 aa20.62■□□□□ 0.89
SYNGAP1-227ENST00000638142 RPS6KL1Q9Y6S9 549 aa20.62■□□□□ 0.89
SYNGAP1-227ENST00000638142 A0A0G2JLL6 359 aaPredicted RBP20.61■□□□□ 0.89
SYNGAP1-227ENST00000638142 ERVK-10P10266 1014 aa20.61■□□□□ 0.89
SYNGAP1-227ENST00000638142 PIM1P11309 404 aaPredicted RBP20.61■□□□□ 0.89
SYNGAP1-227ENST00000638142 MATKP42679 507 aa20.61■□□□□ 0.89
SYNGAP1-227ENST00000638142 SERPINB8P50452 374 aa20.61■□□□□ 0.89
SYNGAP1-227ENST00000638142 RPL26P61254 145 aaKnown RBP20.61■□□□□ 0.89
SYNGAP1-227ENST00000638142 CNPY1Q3B7I2 92 aa20.61■□□□□ 0.89
SYNGAP1-227ENST00000638142 VWA5B1Q5TIE3 1220 aa20.61■□□□□ 0.89
SYNGAP1-227ENST00000638142 PRRT2Q7Z6L0 340 aaPredicted RBP20.61■□□□□ 0.89
SYNGAP1-227ENST00000638142 FAM131BQ86XD5 332 aa20.61■□□□□ 0.89
SYNGAP1-227ENST00000638142 ST13P4Q8IZP2 240 aaPredicted RBP20.61■□□□□ 0.89
SYNGAP1-227ENST00000638142 HSFY1Q96LI6 401 aa20.61■□□□□ 0.89
SYNGAP1-227ENST00000638142 CENPKQ9BS16 269 aa20.61■□□□□ 0.89
SYNGAP1-227ENST00000638142 CYP4F11Q9HBI6 524 aa20.61■□□□□ 0.89
SYNGAP1-227ENST00000638142 ARHGAP26Q9UNA1 814 aa20.61■□□□□ 0.89
SYNGAP1-227ENST00000638142 MYO18AQ92614 2054 aaKnown RBP20.61■□□□□ 0.89
SYNGAP1-227ENST00000638142 ACAT1P24752 427 aaKnown RBP20.61■□□□□ 0.89
SYNGAP1-227ENST00000638142 ADORA2BP29275 332 aa20.61■□□□□ 0.89
SYNGAP1-227ENST00000638142 SPRP35270 261 aaPredicted RBP20.61■□□□□ 0.89
SYNGAP1-227ENST00000638142 MED21Q13503 144 aa20.61■□□□□ 0.89
SYNGAP1-227ENST00000638142 LAMC2Q13753 1193 aa20.61■□□□□ 0.89
SYNGAP1-227ENST00000638142 SLC25A52Q3SY17 297 aa20.61■□□□□ 0.89
SYNGAP1-227ENST00000638142 LIN52Q52LA3 116 aa20.61■□□□□ 0.89
SYNGAP1-227ENST00000638142 METTL21CQ5VZV1 264 aa20.61■□□□□ 0.89
SYNGAP1-227ENST00000638142 FBXW8Q8N3Y1 598 aa20.61■□□□□ 0.89
SYNGAP1-227ENST00000638142 BEST2Q8NFU1 509 aa20.61■□□□□ 0.89
SYNGAP1-227ENST00000638142 CCDC124Q96CT7 223 aaKnown RBP20.61■□□□□ 0.89
SYNGAP1-227ENST00000638142 ZMAT2Q96NC0 199 aaKnown RBP20.61■□□□□ 0.89
SYNGAP1-227ENST00000638142 RBBP8Q99708 897 aa20.61■□□□□ 0.89
SYNGAP1-227ENST00000638142 LPIN3Q9BQK8 851 aa20.61■□□□□ 0.89
SYNGAP1-227ENST00000638142 CDH19Q9H159 772 aa20.61■□□□□ 0.89
SYNGAP1-227ENST00000638142 TXNRD2Q9NNW7 524 aa20.61■□□□□ 0.89
SYNGAP1-227ENST00000638142 GPRC5DQ9NZD1 345 aa20.61■□□□□ 0.89
SYNGAP1-227ENST00000638142 ADAMTS6Q9UKP5 1117 aa20.61■□□□□ 0.89
SYNGAP1-227ENST00000638142 UQCRBP14927 111 aa20.6■□□□□ 0.89
SYNGAP1-227ENST00000638142 MLH1P40692 756 aa20.6■□□□□ 0.89
SYNGAP1-227ENST00000638142 TBL3Q12788 808 aaKnown RBP20.6■□□□□ 0.89
SYNGAP1-227ENST00000638142 CFAP157Q5JU67 520 aa20.6■□□□□ 0.89
SYNGAP1-227ENST00000638142 RASIP1Q5U651 963 aa20.6■□□□□ 0.89
SYNGAP1-227ENST00000638142 EPGNQ6UW88 154 aa20.6■□□□□ 0.89
SYNGAP1-227ENST00000638142 FRMD7Q6ZUT3 714 aa20.6■□□□□ 0.89
SYNGAP1-227ENST00000638142 CRYBG2Q8N1P7 616 aa20.6■□□□□ 0.89
SYNGAP1-227ENST00000638142 DCLK2Q8N568 766 aa20.6■□□□□ 0.89
SYNGAP1-227ENST00000638142 RNF139Q8WU17 664 aa20.6■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms