RNA–Protein interactions for RNA: ENST00000638141.1

CAPN3-221, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 2,358 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-221ENST00000638141 CHAC2Q8WUX2 184 aa12.3□□□□□ -0.44
CAPN3-221ENST00000638141 ZNF486Q96H40 463 aaPredicted RBP12.3□□□□□ -0.44
CAPN3-221ENST00000638141 EGLN2Q96KS0 407 aa12.3□□□□□ -0.44
CAPN3-221ENST00000638141 KLHL32Q96NJ5 620 aa12.3□□□□□ -0.44
CAPN3-221ENST00000638141 MRPL40Q9NQ50 206 aaKnown RBP12.3□□□□□ -0.44
CAPN3-221ENST00000638141 DNMT3BQ9UBC3 853 aaKnown RBP12.3□□□□□ -0.44
CAPN3-221ENST00000638141 ZNRF3Q9ULT6 936 aa12.3□□□□□ -0.44
CAPN3-221ENST00000638141 PCDHGA11Q9Y5H2 935 aa12.3□□□□□ -0.44
CAPN3-221ENST00000638141 TLL2Q9Y6L7 1015 aa12.3□□□□□ -0.44
CAPN3-221ENST00000638141 MSH4O15457 936 aa12.29□□□□□ -0.44
CAPN3-221ENST00000638141 TMEM63AO94886 807 aa12.29□□□□□ -0.44
CAPN3-221ENST00000638141 GSRP00390 522 aa12.29□□□□□ -0.44
CAPN3-221ENST00000638141 KRT1P04264 644 aa12.29□□□□□ -0.44
CAPN3-221ENST00000638141 NTRK1P04629 796 aa12.29□□□□□ -0.44
CAPN3-221ENST00000638141 C7P10643 843 aa12.29□□□□□ -0.44
CAPN3-221ENST00000638141 NCAM1P13591 858 aa12.29□□□□□ -0.44
CAPN3-221ENST00000638141 HPCAL1P37235 193 aa12.29□□□□□ -0.44
CAPN3-221ENST00000638141 HARS2P49590 506 aaKnown RBP12.29□□□□□ -0.44
CAPN3-221ENST00000638141 GAD2Q05329 585 aa12.29□□□□□ -0.44
CAPN3-221ENST00000638141 CDC20Q12834 499 aa12.29□□□□□ -0.44
CAPN3-221ENST00000638141 SUZ12Q15022 739 aaKnown RBP12.29□□□□□ -0.44
CAPN3-221ENST00000638141 AOC3Q16853 763 aa12.29□□□□□ -0.44
CAPN3-221ENST00000638141 TFDP3Q5H9I0 405 aa12.29□□□□□ -0.44
CAPN3-221ENST00000638141 TMEM26Q6ZUK4 368 aa12.29□□□□□ -0.44
CAPN3-221ENST00000638141 GALNT13Q8IUC8 556 aa12.29□□□□□ -0.44
CAPN3-221ENST00000638141 PHTF2Q8N3S3 785 aa12.29□□□□□ -0.44
CAPN3-221ENST00000638141 ANKFN1Q8N957 763 aa12.29□□□□□ -0.44
CAPN3-221ENST00000638141 RAB2BQ8WUD1 216 aa12.29□□□□□ -0.44
CAPN3-221ENST00000638141 S100ZQ8WXG8 99 aa12.29□□□□□ -0.44
CAPN3-221ENST00000638141 FEM1CQ96JP0 617 aa12.29□□□□□ -0.44
CAPN3-221ENST00000638141 RETREG1Q9H6L5 497 aa12.29□□□□□ -0.44
CAPN3-221ENST00000638141 ZFYVE28Q9HCC9 887 aa12.29□□□□□ -0.44
CAPN3-221ENST00000638141 ARMC1Q9NVT9 282 aa12.29□□□□□ -0.44
CAPN3-221ENST00000638141 RABL2BQ9UNT1 228 aa12.29□□□□□ -0.44
CAPN3-221ENST00000638141 GREB1LQ9C091 1923 aaPredicted RBP12.29□□□□□ -0.44
CAPN3-221ENST00000638141 RGSL1A5PLK6 1076 aa12.29□□□□□ -0.44
CAPN3-221ENST00000638141 SFI1A8K8P3 1242 aa12.29□□□□□ -0.44
CAPN3-221ENST00000638141 KBTBD13C9JR72 458 aa12.29□□□□□ -0.44
CAPN3-221ENST00000638141 PIAS1O75925 651 aa12.29□□□□□ -0.44
CAPN3-221ENST00000638141 KRT6AP02538 564 aa12.29□□□□□ -0.44
CAPN3-221ENST00000638141 KRT6BP04259 564 aa12.29□□□□□ -0.44
CAPN3-221ENST00000638141 ELK3P41970 407 aa12.29□□□□□ -0.44
CAPN3-221ENST00000638141 SERPINB9P50453 376 aa12.29□□□□□ -0.44
CAPN3-221ENST00000638141 MS4A2Q01362 244 aa12.29□□□□□ -0.44
CAPN3-221ENST00000638141 GNA12Q03113 381 aa12.29□□□□□ -0.44
CAPN3-221ENST00000638141 CEACAM7Q14002 265 aa12.29□□□□□ -0.44
CAPN3-221ENST00000638141 NRF1Q16656 503 aa12.29□□□□□ -0.44
CAPN3-221ENST00000638141 FASTKD1Q53R41 847 aaKnown RBP12.29□□□□□ -0.44
CAPN3-221ENST00000638141 PPM1LQ5SGD2 360 aa12.29□□□□□ -0.44
CAPN3-221ENST00000638141 TTC33Q6PID6 262 aaPredicted RBP12.29□□□□□ -0.44
CAPN3-221ENST00000638141 MFSD7Q6UXD7 560 aa12.29□□□□□ -0.44
CAPN3-221ENST00000638141 OR13F1Q8NGS4 319 aa12.29□□□□□ -0.44
CAPN3-221ENST00000638141 SUN5Q8TC36 379 aa12.29□□□□□ -0.44
CAPN3-221ENST00000638141 ACMSDQ8TDX5 336 aa12.29□□□□□ -0.44
CAPN3-221ENST00000638141 GPR101Q96P66 508 aaPredicted RBP12.29□□□□□ -0.44
CAPN3-221ENST00000638141 CDRT15Q96T59 188 aa12.29□□□□□ -0.44
CAPN3-221ENST00000638141 SENP7Q9BQF6 1050 aa12.29□□□□□ -0.44
CAPN3-221ENST00000638141 IKZF4Q9H2S9 585 aa12.29□□□□□ -0.44
CAPN3-221ENST00000638141 C8orf4Q9NR00 106 aa12.29□□□□□ -0.44
CAPN3-221ENST00000638141 HSPBP1Q9NZL4 362 aa12.29□□□□□ -0.44
CAPN3-221ENST00000638141 LOC100653049A0A140TA62 436 aa12.28□□□□□ -0.44
CAPN3-221ENST00000638141 TBKBP1A7MCY6 615 aa12.28□□□□□ -0.44
CAPN3-221ENST00000638141 MEIS2O14770 477 aa12.28□□□□□ -0.44
CAPN3-221ENST00000638141 ACOX3O15254 700 aa12.28□□□□□ -0.44
CAPN3-221ENST00000638141 KRT34O76011 436 aa12.28□□□□□ -0.44
CAPN3-221ENST00000638141 UGT2B4P06133 528 aa12.28□□□□□ -0.44
CAPN3-221ENST00000638141 GLDCP23378 1020 aa12.28□□□□□ -0.44
CAPN3-221ENST00000638141 CNTFP26441 200 aa12.28□□□□□ -0.44
CAPN3-221ENST00000638141 MAP4P27816 1152 aaKnown RBP12.28□□□□□ -0.44
CAPN3-221ENST00000638141 NUDT2P50583 147 aa12.28□□□□□ -0.44
CAPN3-221ENST00000638141 CSE1LP55060 971 aaKnown RBP12.28□□□□□ -0.44
CAPN3-221ENST00000638141 TPTEP56180 551 aa12.28□□□□□ -0.44
CAPN3-221ENST00000638141 EIF3EP60228 445 aaKnown RBP12.28□□□□□ -0.44
CAPN3-221ENST00000638141 TRAF2Q12933 501 aa12.28□□□□□ -0.44
CAPN3-221ENST00000638141 MAMLD1Q13495 774 aa12.28□□□□□ -0.44
CAPN3-221ENST00000638141 ARHGEF6Q15052 776 aa12.28□□□□□ -0.44
CAPN3-221ENST00000638141 SLC10A5Q5PT55 438 aa12.28□□□□□ -0.44
CAPN3-221ENST00000638141 SMYD5Q6GMV2 418 aa12.28□□□□□ -0.44
CAPN3-221ENST00000638141 FBXL13Q8NEE6 735 aa12.28□□□□□ -0.44
CAPN3-221ENST00000638141 SH3YL1Q96HL8 342 aaPredicted RBP12.28□□□□□ -0.44
CAPN3-221ENST00000638141 FAR2Q96K12 515 aa12.28□□□□□ -0.44
CAPN3-221ENST00000638141 SORT1Q99523 831 aa12.28□□□□□ -0.44
CAPN3-221ENST00000638141 TMEM121Q9BTD3 319 aa12.28□□□□□ -0.44
CAPN3-221ENST00000638141 CD320Q9NPF0 282 aa12.28□□□□□ -0.44
CAPN3-221ENST00000638141 CNGB3Q9NQW8 809 aa12.28□□□□□ -0.44
CAPN3-221ENST00000638141 GDAP2Q9NXN4 497 aa12.28□□□□□ -0.44
CAPN3-221ENST00000638141 XPO7Q9UIA9 1087 aaKnown RBP12.28□□□□□ -0.44
CAPN3-221ENST00000638141 PSME2Q9UL46 239 aa12.28□□□□□ -0.44
CAPN3-221ENST00000638141 C1orf232A0A0U1RR37 186 aa12.28□□□□□ -0.44
CAPN3-221ENST00000638141 USP17L15C9J2P7 530 aa12.28□□□□□ -0.44
CAPN3-221ENST00000638141 USP17L13C9JLJ4 530 aa12.28□□□□□ -0.44
CAPN3-221ENST00000638141 USP17L11C9JVI0 530 aa12.28□□□□□ -0.44
CAPN3-221ENST00000638141 USP17L18D6R9N7 530 aa12.28□□□□□ -0.44
CAPN3-221ENST00000638141 USP17L22D6RA61 530 aa12.28□□□□□ -0.44
CAPN3-221ENST00000638141 USP17L17D6RBQ6 530 aa12.28□□□□□ -0.44
CAPN3-221ENST00000638141 USP17L19D6RCP7 530 aa12.28□□□□□ -0.44
CAPN3-221ENST00000638141 USP17L20D6RJB6 530 aa12.28□□□□□ -0.44
CAPN3-221ENST00000638141 DCXO43602 365 aa12.28□□□□□ -0.44
CAPN3-221ENST00000638141 ZBTB14O43829 449 aa12.28□□□□□ -0.44
CAPN3-221ENST00000638141 ABCB1P08183 1280 aaPredicted RBP12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms