RNA–Protein interactions for RNA: ENST00000637519.1

CHRNA7-228, Transcript of cholinergic receptor nicotinic alpha 7 subunit, humanhuman

TSL 5

Gene CHRNA7, Length 2,084 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA7-228ENST00000637519 GALNT2Q10471 571 aa22.26■■□□□ 1.15
CHRNA7-228ENST00000637519 ZBTB17Q13105 803 aa22.26■■□□□ 1.15
CHRNA7-228ENST00000637519 OLIG2Q13516 323 aa22.26■■□□□ 1.15
CHRNA7-228ENST00000637519 SEMA5AQ13591 1074 aa22.26■■□□□ 1.15
CHRNA7-228ENST00000637519 CROCCP2Q86T23 111 aa22.26■■□□□ 1.15
CHRNA7-228ENST00000637519 PALM2Q8IXS6 379 aa22.26■■□□□ 1.15
CHRNA7-228ENST00000637519 SLC39A11Q8N1S5 342 aa22.26■■□□□ 1.15
CHRNA7-228ENST00000637519 ARHGAP18Q8N392 663 aa22.26■■□□□ 1.15
CHRNA7-228ENST00000637519 ARHGEF2Q92974 986 aaKnown RBP22.26■■□□□ 1.15
CHRNA7-228ENST00000637519 TMEM169Q96HH4 297 aa22.26■■□□□ 1.15
CHRNA7-228ENST00000637519 ZNF558Q96NG5 402 aa22.26■■□□□ 1.15
CHRNA7-228ENST00000637519 TLR8Q9NR97 1041 aaKnown RBP22.26■■□□□ 1.15
CHRNA7-228ENST00000637519 EURLQ9NYK6 297 aa22.26■■□□□ 1.15
CHRNA7-228ENST00000637519 RABGEF1Q9UJ41 708 aa22.26■■□□□ 1.15
CHRNA7-228ENST00000637519 GREB1Q4ZG55 1949 aa22.26■■□□□ 1.15
CHRNA7-228ENST00000637519 E9PAM4 449 aa22.26■■□□□ 1.15
CHRNA7-228ENST00000637519 EIF3HO15372 352 aaKnown RBP eCLIP22.26■■□□□ 1.15
CHRNA7-228ENST00000637519 SOD2P04179 222 aa22.26■■□□□ 1.15
CHRNA7-228ENST00000637519 IVLP07476 585 aa22.26■■□□□ 1.15
CHRNA7-228ENST00000637519 TUBP50607 506 aa22.26■■□□□ 1.15
CHRNA7-228ENST00000637519 PDZD4Q76G19 769 aaPredicted RBP22.26■■□□□ 1.15
CHRNA7-228ENST00000637519 ARFGAP2Q8N6H7 521 aa22.26■■□□□ 1.15
CHRNA7-228ENST00000637519 PDCD7Q8N8D1 485 aaKnown RBP22.26■■□□□ 1.15
CHRNA7-228ENST00000637519 KLHL8Q9P2G9 620 aaPredicted RBP22.26■■□□□ 1.15
CHRNA7-228ENST00000637519 VANGL2Q9ULK5 521 aa22.26■■□□□ 1.15
CHRNA7-228ENST00000637519 CDH16O75309 829 aa22.25■■□□□ 1.15
CHRNA7-228ENST00000637519 SERPINB6P35237 376 aa22.25■■□□□ 1.15
CHRNA7-228ENST00000637519 RPL10AP62906 217 aaKnown RBP22.25■■□□□ 1.15
CHRNA7-228ENST00000637519 SPARCL1Q14515 664 aa22.25■■□□□ 1.15
CHRNA7-228ENST00000637519 LRRC31Q6UY01 552 aa22.25■■□□□ 1.15
CHRNA7-228ENST00000637519 PPP1R21Q6ZMI0 780 aa22.25■■□□□ 1.15
CHRNA7-228ENST00000637519 PID1Q7Z2X4 250 aa22.25■■□□□ 1.15
CHRNA7-228ENST00000637519 NECAB2Q7Z6G3 386 aa22.25■■□□□ 1.15
CHRNA7-228ENST00000637519 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP22.25■■□□□ 1.15
CHRNA7-228ENST00000637519 TBC1D31Q96DN5 1066 aa22.25■■□□□ 1.15
CHRNA7-228ENST00000637519 GORASP1Q9BQQ3 440 aa22.25■■□□□ 1.15
CHRNA7-228ENST00000637519 CCDC77Q9BR77 488 aa22.25■■□□□ 1.15
CHRNA7-228ENST00000637519 MARCH2Q9P0N8 246 aa22.25■■□□□ 1.15
CHRNA7-228ENST00000637519 MYO18AQ92614 2054 aaKnown RBP22.25■■□□□ 1.15
CHRNA7-228ENST00000637519 NUP205Q92621 2012 aa22.25■■□□□ 1.15
CHRNA7-228ENST00000637519 OPHN1O60890 802 aa22.24■■□□□ 1.15
CHRNA7-228ENST00000637519 STK10O94804 968 aaKnown RBP22.24■■□□□ 1.15
CHRNA7-228ENST00000637519 LSP1P33241 339 aa22.24■■□□□ 1.15
CHRNA7-228ENST00000637519 MMP13P45452 471 aa22.24■■□□□ 1.15
CHRNA7-228ENST00000637519 SMARCB1Q12824 385 aa22.24■■□□□ 1.15
CHRNA7-228ENST00000637519 ARHGAP12Q8IWW6 846 aa22.24■■□□□ 1.15
CHRNA7-228ENST00000637519 C2orf15Q8WU43 125 aaKnown RBP22.24■■□□□ 1.15
CHRNA7-228ENST00000637519 HDAC11Q96DB2 347 aa22.24■■□□□ 1.15
CHRNA7-228ENST00000637519 AGAP3Q96P47 875 aa22.24■■□□□ 1.15
CHRNA7-228ENST00000637519 PLAC1Q9HBJ0 212 aa22.24■■□□□ 1.15
CHRNA7-228ENST00000637519 CLIC5Q9NZA1 410 aa22.24■■□□□ 1.15
CHRNA7-228ENST00000637519 BACE2Q9Y5Z0 518 aa22.24■■□□□ 1.15
CHRNA7-228ENST00000637519 SLC12A8A0AV02 714 aa22.24■■□□□ 1.15
CHRNA7-228ENST00000637519 KIAA0355O15063 1070 aa22.24■■□□□ 1.15
CHRNA7-228ENST00000637519 TPSB2P20231 275 aa22.24■■□□□ 1.15
CHRNA7-228ENST00000637519 TPSAB1Q15661 275 aa22.24■■□□□ 1.15
CHRNA7-228ENST00000637519 USP33Q8TEY7 942 aa22.24■■□□□ 1.15
CHRNA7-228ENST00000637519 XPO6Q96QU8 1125 aaKnown RBP22.24■■□□□ 1.15
CHRNA7-228ENST00000637519 LGALS13Q9UHV8 139 aa22.24■■□□□ 1.15
CHRNA7-228ENST00000637519 ZBTB24O43167 697 aaPredicted RBP22.23■■□□□ 1.15
CHRNA7-228ENST00000637519 TLR5O60602 858 aa22.23■■□□□ 1.15
CHRNA7-228ENST00000637519 CHN1P15882 459 aa22.23■■□□□ 1.15
CHRNA7-228ENST00000637519 HOXC13P31276 330 aa22.23■■□□□ 1.15
CHRNA7-228ENST00000637519 ZNF135P52742 658 aaPredicted RBP22.23■■□□□ 1.15
CHRNA7-228ENST00000637519 CRADDP78560 199 aa22.23■■□□□ 1.15
CHRNA7-228ENST00000637519 MS4A13Q5J8X5 152 aa22.23■■□□□ 1.15
CHRNA7-228ENST00000637519 C4orf22Q6V702 233 aa22.23■■□□□ 1.15
CHRNA7-228ENST00000637519 TFAP2DQ7Z6R9 452 aa22.23■■□□□ 1.15
CHRNA7-228ENST00000637519 SRRM1Q8IYB3 904 aaKnown RBP22.23■■□□□ 1.15
CHRNA7-228ENST00000637519 YME1L1Q96TA2 773 aa22.23■■□□□ 1.15
CHRNA7-228ENST00000637519 STMN4Q9H169 189 aaPredicted RBP22.23■■□□□ 1.15
CHRNA7-228ENST00000637519 LAMA3Q16787 3333 aa22.23■■□□□ 1.15
CHRNA7-228ENST00000637519 SHROOM3Q8TF72 1996 aa22.23■■□□□ 1.15
CHRNA7-228ENST00000637519 TCRBV9S1A1TA0A576 114 aa22.22■■□□□ 1.15
CHRNA7-228ENST00000637519 CD68P34810 354 aaPredicted RBP22.22■■□□□ 1.15
CHRNA7-228ENST00000637519 MAGEA3P43357 314 aa22.22■■□□□ 1.15
CHRNA7-228ENST00000637519 NUMBP49757 651 aa22.22■■□□□ 1.15
CHRNA7-228ENST00000637519 SEC24CP53992 1094 aa22.22■■□□□ 1.15
CHRNA7-228ENST00000637519 DSG1Q02413 1049 aa22.22■■□□□ 1.15
CHRNA7-228ENST00000637519 MCUQ8NE86 351 aa22.22■■□□□ 1.15
CHRNA7-228ENST00000637519 ZNF419Q96HQ0 510 aaPredicted RBP22.22■■□□□ 1.15
CHRNA7-228ENST00000637519 OXCT2Q9BYC2 517 aaPredicted RBP22.22■■□□□ 1.15
CHRNA7-228ENST00000637519 SLC39A8Q9C0K1 460 aa22.22■■□□□ 1.15
CHRNA7-228ENST00000637519 KIF9Q9HAQ2 790 aa22.22■■□□□ 1.15
CHRNA7-228ENST00000637519 CYP4F11Q9HBI6 524 aa22.22■■□□□ 1.15
CHRNA7-228ENST00000637519 RAD54BQ9Y620 910 aa22.22■■□□□ 1.15
CHRNA7-228ENST00000637519 ZBBXA8MT70 800 aa22.22■■□□□ 1.15
CHRNA7-228ENST00000637519 APOEP02649 317 aa22.22■■□□□ 1.15
CHRNA7-228ENST00000637519 ZDHHC11BP0C7U3 371 aa22.22■■□□□ 1.15
CHRNA7-228ENST00000637519 MX2P20592 715 aa22.22■■□□□ 1.15
CHRNA7-228ENST00000637519 PHBP35232 272 aa22.22■■□□□ 1.15
CHRNA7-228ENST00000637519 FDFT1P37268 417 aa22.22■■□□□ 1.15
CHRNA7-228ENST00000637519 MLLT6P55198 1093 aaPredicted RBP22.22■■□□□ 1.15
CHRNA7-228ENST00000637519 PRPF39Q86UA1 669 aaKnown RBP22.22■■□□□ 1.15
CHRNA7-228ENST00000637519 TMEM199Q8N511 208 aa22.22■■□□□ 1.15
CHRNA7-228ENST00000637519 MAML1Q92585 1016 aa22.22■■□□□ 1.15
CHRNA7-228ENST00000637519 FERMT1Q9BQL6 677 aa22.22■■□□□ 1.15
CHRNA7-228ENST00000637519 MAD1L1Q9Y6D9 718 aa22.22■■□□□ 1.15
CHRNA7-228ENST00000637519 PTPRSQ13332 1948 aa22.22■■□□□ 1.15
CHRNA7-228ENST00000637519 NCAM2O15394 837 aa22.21■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 81.6 ms