RNA–Protein interactions for RNA: ENST00000637329.1

CLN6-219, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 1,204 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-219ENST00000637329 MS4A13Q5J8X5 152 aa15.81■□□□□ 0.12
CLN6-219ENST00000637329 PPP2R2DQ66LE6 453 aa15.81■□□□□ 0.12
CLN6-219ENST00000637329 ZDHHC24Q6UX98 284 aa15.81■□□□□ 0.12
CLN6-219ENST00000637329 LRRC31Q6UY01 552 aa15.81■□□□□ 0.12
CLN6-219ENST00000637329 SPATA31D4Q6ZUB0 917 aa15.81■□□□□ 0.12
CLN6-219ENST00000637329 SPRED2Q7Z698 418 aa15.81■□□□□ 0.12
CLN6-219ENST00000637329 PCGF5Q86SE9 256 aa15.81■□□□□ 0.12
CLN6-219ENST00000637329 ZC3H18Q86VM9 953 aaKnown RBP15.81■□□□□ 0.12
CLN6-219ENST00000637329 ZNF683Q8IZ20 524 aa15.81■□□□□ 0.12
CLN6-219ENST00000637329 MREGQ8N565 214 aa15.81■□□□□ 0.12
CLN6-219ENST00000637329 TFB1MQ8WVM0 346 aaKnown RBP15.81■□□□□ 0.12
CLN6-219ENST00000637329 MRPS31Q92665 395 aaKnown RBP15.81■□□□□ 0.12
CLN6-219ENST00000637329 ART4Q93070 314 aa15.81■□□□□ 0.12
CLN6-219ENST00000637329 ASB2Q96Q27 587 aa15.81■□□□□ 0.12
CLN6-219ENST00000637329 UHRF1Q96T88 793 aaPredicted RBP15.81■□□□□ 0.12
CLN6-219ENST00000637329 GAS2L1Q99501 681 aaPredicted RBP15.81■□□□□ 0.12
CLN6-219ENST00000637329 LRRC3Q9BY71 257 aa15.81■□□□□ 0.12
CLN6-219ENST00000637329 PBX4Q9BYU1 374 aa15.81■□□□□ 0.12
CLN6-219ENST00000637329 FOXP3Q9BZS1 431 aa15.81■□□□□ 0.12
CLN6-219ENST00000637329 SIK2Q9H0K1 926 aa15.81■□□□□ 0.12
CLN6-219ENST00000637329 TSPYL1Q9H0U9 437 aa15.81■□□□□ 0.12
CLN6-219ENST00000637329 MAN1C1Q9NR34 630 aa15.81■□□□□ 0.12
CLN6-219ENST00000637329 ZDHHC7Q9NXF8 308 aa15.81■□□□□ 0.12
CLN6-219ENST00000637329 SNX24Q9Y343 169 aa15.81■□□□□ 0.12
CLN6-219ENST00000637329 DNALI1O14645 258 aaPredicted RBP15.8■□□□□ 0.12
CLN6-219ENST00000637329 MTSS1O43312 755 aa15.8■□□□□ 0.12
CLN6-219ENST00000637329 CLASP2O75122 1294 aaKnown RBP15.8■□□□□ 0.12
CLN6-219ENST00000637329 XYLBO75191 536 aa15.8■□□□□ 0.12
CLN6-219ENST00000637329 STK10O94804 968 aaKnown RBP15.8■□□□□ 0.12
CLN6-219ENST00000637329 RHOQP17081 205 aa15.8■□□□□ 0.12
CLN6-219ENST00000637329 DDX6P26196 483 aaKnown RBP eCLIP15.8■□□□□ 0.122e-8■■□□□ 11.6
CLN6-219ENST00000637329 GABRR2P28476 465 aa15.8■□□□□ 0.12
CLN6-219ENST00000637329 ACTN2P35609 894 aa15.8■□□□□ 0.12
CLN6-219ENST00000637329 ADCY8P40145 1251 aa15.8■□□□□ 0.12
CLN6-219ENST00000637329 SLC11A2P49281 568 aa15.8■□□□□ 0.12
CLN6-219ENST00000637329 GALNT2Q10471 571 aa15.8■□□□□ 0.12
CLN6-219ENST00000637329 SLC10A2Q12908 348 aaPredicted RBP15.8■□□□□ 0.12
CLN6-219ENST00000637329 ARTNQ5T4W7 220 aa15.8■□□□□ 0.12
CLN6-219ENST00000637329 HEATR6Q6AI08 1181 aaKnown RBP15.8■□□□□ 0.12
CLN6-219ENST00000637329 RWDD4Q6NW29 188 aaKnown RBP15.8■□□□□ 0.12
CLN6-219ENST00000637329 CEP128Q6ZU80 1094 aa15.8■□□□□ 0.12
CLN6-219ENST00000637329 HDXQ7Z353 690 aa15.8■□□□□ 0.12
CLN6-219ENST00000637329 DDX42Q86XP3 938 aaKnown RBP eCLIP15.8■□□□□ 0.12
CLN6-219ENST00000637329 RTL3Q8N8U3 475 aaKnown RBP15.8■□□□□ 0.12
CLN6-219ENST00000637329 ADAMTS19Q8TE59 1207 aa15.8■□□□□ 0.12
CLN6-219ENST00000637329 SLC22A17Q8WUG5 538 aa15.8■□□□□ 0.12
CLN6-219ENST00000637329 HDAC11Q96DB2 347 aa15.8■□□□□ 0.12
CLN6-219ENST00000637329 PRMT1Q99873 361 aaKnown RBP15.8■□□□□ 0.12
CLN6-219ENST00000637329 KLF16Q9BXK1 252 aaPredicted RBP15.8■□□□□ 0.12
CLN6-219ENST00000637329 ZYG11BQ9C0D3 744 aa15.8■□□□□ 0.12
CLN6-219ENST00000637329 PAK5Q9P286 719 aa15.8■□□□□ 0.12
CLN6-219ENST00000637329 THEGQ9P2T0 379 aa15.8■□□□□ 0.12
CLN6-219ENST00000637329 ZMYM5Q9UJ78 669 aa15.8■□□□□ 0.12
CLN6-219ENST00000637329 SHOC2Q9UQ13 582 aa15.8■□□□□ 0.12
CLN6-219ENST00000637329 MTCL1Q9Y4B5 1905 aaKnown RBP15.8■□□□□ 0.12
CLN6-219ENST00000637329 ANAPC1Q9H1A4 1944 aa15.79■□□□□ 0.12
CLN6-219ENST00000637329 C2orf78A6NCI8 922 aa15.79■□□□□ 0.12
CLN6-219ENST00000637329 KCNN4O15554 427 aa15.79■□□□□ 0.12
CLN6-219ENST00000637329 ACSL4O60488 711 aa15.79■□□□□ 0.12
CLN6-219ENST00000637329 STC2O76061 302 aa15.79■□□□□ 0.12
CLN6-219ENST00000637329 PAPLNO95428 1278 aa15.79■□□□□ 0.12
CLN6-219ENST00000637329 IFNB1P01574 187 aa15.79■□□□□ 0.12
CLN6-219ENST00000637329 TNNT3P45378 269 aaPredicted RBP15.79■□□□□ 0.12
CLN6-219ENST00000637329 GDF10P55107 478 aa15.79■□□□□ 0.12
CLN6-219ENST00000637329 AUHQ13825 339 aaKnown RBP15.79■□□□□ 0.12
CLN6-219ENST00000637329 MORF4L2Q15014 288 aa15.79■□□□□ 0.12
CLN6-219ENST00000637329 TRADDQ15628 312 aa15.79■□□□□ 0.12
CLN6-219ENST00000637329 C5orf22Q49AR2 442 aa15.79■□□□□ 0.12
CLN6-219ENST00000637329 SPDYCQ5MJ68 293 aa15.79■□□□□ 0.12
CLN6-219ENST00000637329 IZUMO3Q5VZ72 239 aa15.79■□□□□ 0.12
CLN6-219ENST00000637329 HOOK3Q86VS8 718 aa15.79■□□□□ 0.12
CLN6-219ENST00000637329 CHSY1Q86X52 802 aa15.79■□□□□ 0.12
CLN6-219ENST00000637329 LRRC49Q8IUZ0 686 aa15.79■□□□□ 0.12
CLN6-219ENST00000637329 NPWQ8N729 165 aa15.79■□□□□ 0.12
CLN6-219ENST00000637329 FAM71DQ8N9W8 422 aa15.79■□□□□ 0.12
CLN6-219ENST00000637329 FBXO25Q8TCJ0 367 aa15.79■□□□□ 0.12
CLN6-219ENST00000637329 DDX50Q9BQ39 737 aaKnown RBP15.79■□□□□ 0.12
CLN6-219ENST00000637329 HINFPQ9BQA5 517 aa15.79■□□□□ 0.12
CLN6-219ENST00000637329 PHACTR1Q9C0D0 580 aa15.79■□□□□ 0.12
CLN6-219ENST00000637329 NEUROG2Q9H2A3 272 aa15.79■□□□□ 0.12
CLN6-219ENST00000637329 VIPAS39Q9H9C1 493 aa15.79■□□□□ 0.12
CLN6-219ENST00000637329 USP29Q9HBJ7 922 aa15.79■□□□□ 0.12
CLN6-219ENST00000637329 TMEM248Q9NWD8 314 aa15.79■□□□□ 0.12
CLN6-219ENST00000637329 ZNF446Q9NWS9 450 aa15.79■□□□□ 0.12
CLN6-219ENST00000637329 XPO7Q9UIA9 1087 aaKnown RBP15.79■□□□□ 0.12
CLN6-219ENST00000637329 MFHAS1Q9Y4C4 1052 aa15.79■□□□□ 0.12
CLN6-219ENST00000637329 SNX10Q9Y5X0 201 aa15.79■□□□□ 0.12
CLN6-219ENST00000637329 CHD9Q3L8U1 2897 aa15.79■□□□□ 0.12
CLN6-219ENST00000637329 C5orf60A6NFR6 353 aa15.78■□□□□ 0.12
CLN6-219ENST00000637329 DRGXA6NNA5 263 aa15.78■□□□□ 0.12
CLN6-219ENST00000637329 F5H5T6 163 aa15.78■□□□□ 0.12
CLN6-219ENST00000637329 CCL16O15467 120 aa15.78■□□□□ 0.12
CLN6-219ENST00000637329 GCATO75600 419 aa15.78■□□□□ 0.12
CLN6-219ENST00000637329 HMBSP08397 361 aa15.78■□□□□ 0.12
CLN6-219ENST00000637329 SRGAP2BP0DMP2 458 aa15.78■□□□□ 0.12
CLN6-219ENST00000637329 MBL2P11226 248 aaPredicted RBP15.78■□□□□ 0.12
CLN6-219ENST00000637329 RBL1P28749 1068 aa15.78■□□□□ 0.12
CLN6-219ENST00000637329 GGCXP38435 758 aa15.78■□□□□ 0.12
CLN6-219ENST00000637329 HSPA9P38646 679 aaKnown RBP15.78■□□□□ 0.12
CLN6-219ENST00000637329 PBX2P40425 430 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms