RNA–Protein interactions for RNA: ENST00000636549.1

CACNA1A-227, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 6,792 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-227ENST00000636549 UAP1L1Q3KQV9 507 aa18.19■□□□□ 0.5
CACNA1A-227ENST00000636549 KLHL12Q53G59 568 aa18.19■□□□□ 0.5
CACNA1A-227ENST00000636549 CDC73Q6P1J9 531 aa18.19■□□□□ 0.5
CACNA1A-227ENST00000636549 MAB21L3Q8N8X9 362 aa18.19■□□□□ 0.5
CACNA1A-227ENST00000636549 NAXEQ8NCW5 288 aa18.19■□□□□ 0.5
CACNA1A-227ENST00000636549 SNTNA6NMZ2 147 aa18.19■□□□□ 0.5
CACNA1A-227ENST00000636549 NEDD8-MDP1E9PL57 170 aa18.19■□□□□ 0.5
CACNA1A-227ENST00000636549 IGF2BP3O00425 579 aaKnown RBP eCLIP18.19■□□□□ 0.5
CACNA1A-227ENST00000636549 VEGFAP15692 232 aaPredicted RBP18.19■□□□□ 0.5
CACNA1A-227ENST00000636549 RASA1P20936 1047 aa18.19■□□□□ 0.5
CACNA1A-227ENST00000636549 SLC29A2Q14542 456 aa18.19■□□□□ 0.5
CACNA1A-227ENST00000636549 ULK3Q6PHR2 472 aa18.19■□□□□ 0.5
CACNA1A-227ENST00000636549 CYP2R1Q6VVX0 501 aa18.19■□□□□ 0.5
CACNA1A-227ENST00000636549 TMEM199Q8N511 208 aa18.19■□□□□ 0.5
CACNA1A-227ENST00000636549 OSBPL3Q9H4L5 887 aa18.19■□□□□ 0.5
CACNA1A-227ENST00000636549 PCDHB2Q9Y5E7 798 aa18.19■□□□□ 0.5
CACNA1A-227ENST00000636549 ALG6Q9Y672 507 aa18.19■□□□□ 0.5
CACNA1A-227ENST00000636549 FARP2O94887 1054 aaPredicted RBP18.19■□□□□ 0.5
CACNA1A-227ENST00000636549 DBIP07108 87 aaKnown RBP18.19■□□□□ 0.5
CACNA1A-227ENST00000636549 COILP38432 576 aaPredicted RBP18.19■□□□□ 0.5
CACNA1A-227ENST00000636549 NDST1P52848 882 aa18.19■□□□□ 0.5
CACNA1A-227ENST00000636549 COPZ1P61923 177 aa18.19■□□□□ 0.5
CACNA1A-227ENST00000636549 ARMCX4Q5H9R4 360 aa18.19■□□□□ 0.5
CACNA1A-227ENST00000636549 PDPK2PQ6A1A2 396 aa18.19■□□□□ 0.5
CACNA1A-227ENST00000636549 IL27RAQ6UWB1 636 aa18.19■□□□□ 0.5
CACNA1A-227ENST00000636549 ZNF563Q8TA94 476 aa18.19■□□□□ 0.5
CACNA1A-227ENST00000636549 CRB1P82279 1406 aa18.19■□□□□ 0.5
CACNA1A-227ENST00000636549 MAP3K4Q9Y6R4 1608 aa18.19■□□□□ 0.5
CACNA1A-227ENST00000636549 AREL1O15033 823 aa18.19■□□□□ 0.5
CACNA1A-227ENST00000636549 DNAL1Q4LDG9 190 aa18.19■□□□□ 0.5
CACNA1A-227ENST00000636549 TRIQKQ629K1 86 aa18.19■□□□□ 0.5
CACNA1A-227ENST00000636549 SYT12Q8IV01 421 aa18.19■□□□□ 0.5
CACNA1A-227ENST00000636549 EVA1BQ9NVM1 165 aa18.19■□□□□ 0.5
CACNA1A-227ENST00000636549 LRATO95237 230 aa18.19■□□□□ 0.5
CACNA1A-227ENST00000636549 COX7A2P14406 83 aa18.19■□□□□ 0.5
CACNA1A-227ENST00000636549 LHX1P48742 406 aa18.19■□□□□ 0.5
CACNA1A-227ENST00000636549 SLC18A3Q16572 532 aa18.19■□□□□ 0.5
CACNA1A-227ENST00000636549 FAM45BPQ6NSW5 357 aa18.19■□□□□ 0.5
CACNA1A-227ENST00000636549 ZNF579Q8NAF0 562 aaKnown RBP18.19■□□□□ 0.5
CACNA1A-227ENST00000636549 MRPL48Q96GC5 212 aaKnown RBP18.19■□□□□ 0.5
CACNA1A-227ENST00000636549 KIF2CQ99661 725 aa18.19■□□□□ 0.5
CACNA1A-227ENST00000636549 TRIM64A6NGJ6 449 aa18.19■□□□□ 0.5
CACNA1A-227ENST00000636549 CYP2A6P11509 494 aaPredicted RBP18.19■□□□□ 0.5
CACNA1A-227ENST00000636549 CRADDP78560 199 aa18.19■□□□□ 0.5
CACNA1A-227ENST00000636549 OLFML2AQ68BL7 652 aa18.19■□□□□ 0.5
CACNA1A-227ENST00000636549 MOB2Q70IA6 237 aa18.19■□□□□ 0.5
CACNA1A-227ENST00000636549 DAW1Q8N136 415 aa18.19■□□□□ 0.5
CACNA1A-227ENST00000636549 POMKQ9H5K3 350 aa18.19■□□□□ 0.5
CACNA1A-227ENST00000636549 ATXN2Q99700 1313 aaKnown RBP18.18■□□□□ 0.5
CACNA1A-227ENST00000636549 PNMA8CA0A1B0GUJ8 204 aa18.18■□□□□ 0.5
CACNA1A-227ENST00000636549 FDFT1P37268 417 aa18.18■□□□□ 0.5
CACNA1A-227ENST00000636549 BCAT1P54687 386 aa18.18■□□□□ 0.5
CACNA1A-227ENST00000636549 FOXM1Q08050 763 aa18.18■□□□□ 0.5
CACNA1A-227ENST00000636549 MARC1Q5VT66 337 aa18.18■□□□□ 0.5
CACNA1A-227ENST00000636549 PLEKHA7Q6IQ23 1121 aa18.18■□□□□ 0.5
CACNA1A-227ENST00000636549 SPATA6LQ8N4H0 392 aa18.18■□□□□ 0.5
CACNA1A-227ENST00000636549 SLC20A1Q8WUM9 679 aa18.18■□□□□ 0.5
CACNA1A-227ENST00000636549 TMEM176AQ96HP8 235 aa18.18■□□□□ 0.5
CACNA1A-227ENST00000636549 DEFB118Q96PH6 123 aa18.18■□□□□ 0.5
CACNA1A-227ENST00000636549 CRAMP1Q96RY5 1269 aa18.18■□□□□ 0.5
CACNA1A-227ENST00000636549 SLITRK2Q9H156 845 aa18.18■□□□□ 0.5
CACNA1A-227ENST00000636549 UNC13AQ9UPW8 1703 aa18.18■□□□□ 0.5
CACNA1A-227ENST00000636549 TIMM44O43615 452 aa18.18■□□□□ 0.5
CACNA1A-227ENST00000636549 INMTO95050 263 aa18.18■□□□□ 0.5
CACNA1A-227ENST00000636549 TSPAN19P0C672 248 aa18.18■□□□□ 0.5
CACNA1A-227ENST00000636549 ITPK1Q13572 414 aa18.18■□□□□ 0.5
CACNA1A-227ENST00000636549 GTF3C2Q8WUA4 911 aaPredicted RBP18.18■□□□□ 0.5
CACNA1A-227ENST00000636549 ARL15Q9NXU5 204 aa18.18■□□□□ 0.5
CACNA1A-227ENST00000636549 POLLQ9UGP5 575 aa18.18■□□□□ 0.5
CACNA1A-227ENST00000636549 RABGEF1Q9UJ41 708 aa18.18■□□□□ 0.5
CACNA1A-227ENST00000636549 USP15Q9Y4E8 981 aaPredicted RBP18.18■□□□□ 0.5
CACNA1A-227ENST00000636549 TRAV19A0A0A6YYK7 116 aa18.18■□□□□ 0.5
CACNA1A-227ENST00000636549 TMED10P49755 219 aaKnown RBP18.18■□□□□ 0.5
CACNA1A-227ENST00000636549 PSEN2P49810 448 aa18.18■□□□□ 0.5
CACNA1A-227ENST00000636549 OTOP2Q7RTS6 562 aa18.18■□□□□ 0.5
CACNA1A-227ENST00000636549 RTL3Q8N8U3 475 aaKnown RBP18.18■□□□□ 0.5
CACNA1A-227ENST00000636549 NSL1Q96IY1 281 aa18.18■□□□□ 0.5
CACNA1A-227ENST00000636549 UVRAGQ9P2Y5 699 aa18.18■□□□□ 0.5
CACNA1A-227ENST00000636549 TAF6LQ9Y6J9 622 aa18.18■□□□□ 0.5
CACNA1A-227ENST00000636549 PLEKHG2Q9H7P9 1386 aa18.18■□□□□ 0.5
CACNA1A-227ENST00000636549 MED24O75448 989 aa18.18■□□□□ 0.5
CACNA1A-227ENST00000636549 EXOSC10Q01780 885 aaKnown RBP18.18■□□□□ 0.5
CACNA1A-227ENST00000636549 DMTNQ08495 405 aa18.18■□□□□ 0.5
CACNA1A-227ENST00000636549 ATP1A4Q13733 1029 aa18.18■□□□□ 0.5
CACNA1A-227ENST00000636549 NEDD8Q15843 81 aa18.18■□□□□ 0.5
CACNA1A-227ENST00000636549 ADCY4Q8NFM4 1077 aa18.18■□□□□ 0.5
CACNA1A-227ENST00000636549 PURBQ96QR8 312 aaKnown RBP18.18■□□□□ 0.5
CACNA1A-227ENST00000636549 HES2Q9Y543 173 aa18.18■□□□□ 0.5
CACNA1A-227ENST00000636549 ICAM1P05362 532 aa18.18■□□□□ 0.5
CACNA1A-227ENST00000636549 MDH1P40925 334 aaKnown RBP18.18■□□□□ 0.5
CACNA1A-227ENST00000636549 CLK3P49761 638 aaKnown RBP18.18■□□□□ 0.5
CACNA1A-227ENST00000636549 STOX1Q6ZVD7 989 aa18.18■□□□□ 0.5
CACNA1A-227ENST00000636549 SUCOQ9UBS9 1254 aaKnown RBP18.18■□□□□ 0.5
CACNA1A-227ENST00000636549 ALOX12P18054 663 aa18.17■□□□□ 0.5
CACNA1A-227ENST00000636549 JAK1P23458 1154 aa18.17■□□□□ 0.5
CACNA1A-227ENST00000636549 BACE1P56817 501 aa18.17■□□□□ 0.5
CACNA1A-227ENST00000636549 GALNT3Q14435 633 aa18.17■□□□□ 0.5
CACNA1A-227ENST00000636549 TRIM16LQ309B1 348 aa18.17■□□□□ 0.5
CACNA1A-227ENST00000636549 ZNF484Q5JVG2 852 aa18.17■□□□□ 0.5
CACNA1A-227ENST00000636549 KCNQ5Q9NR82 932 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 80.4 ms