RNA–Protein interactions for RNA: ENST00000635675.2

LINC00339-210, long intergenic non-protein coding RNA 339, humanhuman

TSL 5 BASIC

Gene LINC00339, Length 1,404 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-210ENST00000635675 PSMA2P25787 234 aa10.05□□□□□ -0.8
LINC00339-210ENST00000635675 CDC25BP30305 580 aa10.05□□□□□ -0.8
LINC00339-210ENST00000635675 HOXA6P31267 233 aa10.05□□□□□ -0.8
LINC00339-210ENST00000635675 CD70P32970 193 aa10.05□□□□□ -0.8
LINC00339-210ENST00000635675 TIE1P35590 1138 aa10.05□□□□□ -0.8
LINC00339-210ENST00000635675 GGCXP38435 758 aa10.05□□□□□ -0.8
LINC00339-210ENST00000635675 IRAK1P51617 712 aa10.05□□□□□ -0.8
LINC00339-210ENST00000635675 PTPN5P54829 565 aa10.05□□□□□ -0.8
LINC00339-210ENST00000635675 CSTF1Q05048 431 aaKnown RBP10.05□□□□□ -0.8
LINC00339-210ENST00000635675 CCDC173Q0VFZ6 552 aa10.05□□□□□ -0.8
LINC00339-210ENST00000635675 SCAPQ12770 1279 aa10.05□□□□□ -0.8
LINC00339-210ENST00000635675 ZNF528Q3MIS6 628 aa10.05□□□□□ -0.8
LINC00339-210ENST00000635675 ARL13BQ3SXY8 428 aa10.05□□□□□ -0.8
LINC00339-210ENST00000635675 HSF5Q4G112 596 aaPredicted RBP10.05□□□□□ -0.8
LINC00339-210ENST00000635675 FSCBQ5H9T9 825 aa10.05□□□□□ -0.8
LINC00339-210ENST00000635675 RABGAP1LQ5R372 815 aa10.05□□□□□ -0.8
LINC00339-210ENST00000635675 TTC39BQ5VTQ0 682 aaPredicted RBP10.05□□□□□ -0.8
LINC00339-210ENST00000635675 TMEM215Q68D42 235 aa10.05□□□□□ -0.8
LINC00339-210ENST00000635675 ANKS1BQ7Z6G8 1248 aa10.05□□□□□ -0.8
LINC00339-210ENST00000635675 ADIPOR2Q86V24 386 aa10.05□□□□□ -0.8
LINC00339-210ENST00000635675 MFN1Q8IWA4 741 aa10.05□□□□□ -0.8
LINC00339-210ENST00000635675 CCAR2Q8N163 923 aaKnown RBP10.05□□□□□ -0.8
LINC00339-210ENST00000635675 CCDC33Q8N5R6 958 aa10.05□□□□□ -0.8
LINC00339-210ENST00000635675 ALLCQ8N6M5 410 aa10.05□□□□□ -0.8
LINC00339-210ENST00000635675 ARFGAP1Q8N6T3 406 aa10.05□□□□□ -0.8
LINC00339-210ENST00000635675 CCDC185Q8N715 623 aa10.05□□□□□ -0.8
LINC00339-210ENST00000635675 ZNF513Q8N8E2 541 aaPredicted RBP10.05□□□□□ -0.8
LINC00339-210ENST00000635675 NELL1Q92832 810 aa10.05□□□□□ -0.8
LINC00339-210ENST00000635675 RPRD1AQ96P16 312 aaPredicted RBP10.05□□□□□ -0.8
LINC00339-210ENST00000635675 ACOX2Q99424 681 aa10.05□□□□□ -0.8
LINC00339-210ENST00000635675 MAGEB5Q9BZ81 275 aa10.05□□□□□ -0.8
LINC00339-210ENST00000635675 OSBPL2Q9H1P3 480 aa10.05□□□□□ -0.8
LINC00339-210ENST00000635675 DEF6Q9H4E7 631 aa10.05□□□□□ -0.8
LINC00339-210ENST00000635675 ABCB8Q9NUT2 735 aa10.05□□□□□ -0.8
LINC00339-210ENST00000635675 POLR3BQ9NW08 1133 aaPredicted RBP10.05□□□□□ -0.8
LINC00339-210ENST00000635675 ELOVL2Q9NXB9 296 aa10.05□□□□□ -0.8
LINC00339-210ENST00000635675 GGA2Q9UJY4 613 aa10.05□□□□□ -0.8
LINC00339-210ENST00000635675 WDFY4Q6ZS81 3184 aa10.05□□□□□ -0.8
LINC00339-210ENST00000635675 IGLV3-10A0A075B6K4 115 aa10.04□□□□□ -0.8
LINC00339-210ENST00000635675 A0A1B0GVM2 712 aa10.04□□□□□ -0.8
LINC00339-210ENST00000635675 TCAF2A6NFQ2 919 aa10.04□□□□□ -0.8
LINC00339-210ENST00000635675 E9PAM4 449 aa10.04□□□□□ -0.8
LINC00339-210ENST00000635675 H0Y626 953 aa10.04□□□□□ -0.8
LINC00339-210ENST00000635675 SGK1O00141 431 aa10.04□□□□□ -0.8
LINC00339-210ENST00000635675 ADAM23O75077 832 aa10.04□□□□□ -0.8
LINC00339-210ENST00000635675 KLF8O95600 359 aaPredicted RBP10.04□□□□□ -0.8
LINC00339-210ENST00000635675 SP9P0CG40 484 aa10.04□□□□□ -0.8
LINC00339-210ENST00000635675 PABPC1P11940 636 aaKnown RBP10.04□□□□□ -0.8
LINC00339-210ENST00000635675 FECHP22830 423 aa10.04□□□□□ -0.8
LINC00339-210ENST00000635675 HOXC13P31276 330 aa10.04□□□□□ -0.8
LINC00339-210ENST00000635675 NRG1Q02297 640 aaPredicted RBP10.04□□□□□ -0.8
LINC00339-210ENST00000635675 LMAN2Q12907 356 aa10.04□□□□□ -0.8
LINC00339-210ENST00000635675 DMC1Q14565 340 aa10.04□□□□□ -0.8
LINC00339-210ENST00000635675 EIF4HQ15056 248 aaKnown RBP10.04□□□□□ -0.8
LINC00339-210ENST00000635675 EGFLAMQ63HQ2 1017 aa10.04□□□□□ -0.8
LINC00339-210ENST00000635675 TSSK4Q6SA08 328 aa10.04□□□□□ -0.8
LINC00339-210ENST00000635675 LRRC31Q6UY01 552 aa10.04□□□□□ -0.8
LINC00339-210ENST00000635675 CHST9Q7L1S5 443 aa10.04□□□□□ -0.8
LINC00339-210ENST00000635675 SLFN11Q7Z7L1 901 aa10.04□□□□□ -0.8
LINC00339-210ENST00000635675 CIR1Q86X95 450 aaPredicted RBP10.04□□□□□ -0.8
LINC00339-210ENST00000635675 CARNMT1Q8N4J0 409 aa10.04□□□□□ -0.8
LINC00339-210ENST00000635675 TXNDC5Q8NBS9 432 aaKnown RBP10.04□□□□□ -0.8
LINC00339-210ENST00000635675 WFIKKN2Q8TEU8 576 aa10.04□□□□□ -0.8
LINC00339-210ENST00000635675 ACDQ96AP0 544 aa10.04□□□□□ -0.8
LINC00339-210ENST00000635675 ARHGEF26Q96DR7 871 aa10.04□□□□□ -0.8
LINC00339-210ENST00000635675 PANX2Q96RD6 677 aa10.04□□□□□ -0.8
LINC00339-210ENST00000635675 NUP85Q9BW27 656 aa10.04□□□□□ -0.8
LINC00339-210ENST00000635675 PACSIN1Q9BY11 444 aa10.04□□□□□ -0.8
LINC00339-210ENST00000635675 IRF2BPLQ9H1B7 796 aa10.04□□□□□ -0.8
LINC00339-210ENST00000635675 ZDHHC4Q9NPG8 344 aa10.04□□□□□ -0.8
LINC00339-210ENST00000635675 SPTLC3Q9NUV7 552 aa10.04□□□□□ -0.8
LINC00339-210ENST00000635675 KIAA1522Q9P206 1035 aaPredicted RBP10.04□□□□□ -0.8
LINC00339-210ENST00000635675 OR12D3Q9UGF7 316 aa10.04□□□□□ -0.8
LINC00339-210ENST00000635675 INTS6Q9UL03 887 aaKnown RBP10.04□□□□□ -0.8
LINC00339-210ENST00000635675 MMP17Q9ULZ9 603 aa10.04□□□□□ -0.8
LINC00339-210ENST00000635675 TBC1D30Q9Y2I9 924 aa10.04□□□□□ -0.8
LINC00339-210ENST00000635675 DOCK4Q8N1I0 1966 aa10.03□□□□□ -0.8
LINC00339-210ENST00000635675 FAM72CH0Y354 149 aa10.03□□□□□ -0.8
LINC00339-210ENST00000635675 NPC1O15118 1278 aa10.03□□□□□ -0.8
LINC00339-210ENST00000635675 SRGAP2O75044 1071 aa10.03□□□□□ -0.8
LINC00339-210ENST00000635675 CLDN11O75508 207 aa10.03□□□□□ -0.8
LINC00339-210ENST00000635675 CNTN5O94779 1100 aa10.03□□□□□ -0.8
LINC00339-210ENST00000635675 H2AFZP0C0S5 128 aa10.03□□□□□ -0.8
LINC00339-210ENST00000635675 DESP17661 470 aa10.03□□□□□ -0.8
LINC00339-210ENST00000635675 NTSR1P30989 418 aa10.03□□□□□ -0.8
LINC00339-210ENST00000635675 PLK1P53350 603 aa10.03□□□□□ -0.8
LINC00339-210ENST00000635675 AIF1P55008 147 aa10.03□□□□□ -0.8
LINC00339-210ENST00000635675 CDH4P55283 916 aa10.03□□□□□ -0.8
LINC00339-210ENST00000635675 CDH18Q13634 790 aa10.03□□□□□ -0.8
LINC00339-210ENST00000635675 ENPP2Q13822 863 aa10.03□□□□□ -0.8
LINC00339-210ENST00000635675 ACAP1Q15027 740 aa10.03□□□□□ -0.8
LINC00339-210ENST00000635675 CRY1Q16526 586 aa10.03□□□□□ -0.8
LINC00339-210ENST00000635675 FUT11Q495W5 492 aa10.03□□□□□ -0.8
LINC00339-210ENST00000635675 ALFQ53S48 1182 aa10.03□□□□□ -0.8
LINC00339-210ENST00000635675 EOGTQ5NDL2 527 aa10.03□□□□□ -0.8
LINC00339-210ENST00000635675 FAM72AQ5TYM5 149 aa10.03□□□□□ -0.8
LINC00339-210ENST00000635675 MANEALQ5VSG8 457 aa10.03□□□□□ -0.8
LINC00339-210ENST00000635675 MBLAC2Q68D91 279 aa10.03□□□□□ -0.8
LINC00339-210ENST00000635675 FAM72DQ6L9T8 149 aa10.03□□□□□ -0.8
LINC00339-210ENST00000635675 CXorf57Q6NSI4 855 aaKnown RBP10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms