RNA–Protein interactions for RNA: ENST00000635293.1

TP53-228, Transcript of tumor protein p53, humanhuman

TSL 5

Gene TP53, Length 1,883 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TP53-228ENST00000635293 ZMYND8Q9ULU4 1186 aaPredicted RBP11.98□□□□□ -0.49
TP53-228ENST00000635293 NOVA2Q9UNW9 492 aaKnown RBP11.98□□□□□ -0.49
TP53-228ENST00000635293 PLXNA4Q9HCM2 1894 aa11.98□□□□□ -0.49
TP53-228ENST00000635293 TCRBV7S3A2A0A539 114 aa11.97□□□□□ -0.49
TP53-228ENST00000635293 WASH4PA8MWX3 477 aa11.97□□□□□ -0.49
TP53-228ENST00000635293 E7EVH7 732 aa11.97□□□□□ -0.49
TP53-228ENST00000635293 ADAM12O43184 909 aa11.97□□□□□ -0.49
TP53-228ENST00000635293 CDH16O75309 829 aa11.97□□□□□ -0.49
TP53-228ENST00000635293 SOAT2O75908 522 aa11.97□□□□□ -0.49
TP53-228ENST00000635293 ABLIM3O94929 683 aa11.97□□□□□ -0.49
TP53-228ENST00000635293 IGLV3-27P01718 113 aa11.97□□□□□ -0.49
TP53-228ENST00000635293 MDH1P40925 334 aaKnown RBP11.97□□□□□ -0.49
TP53-228ENST00000635293 GARSP41250 739 aaKnown RBP11.97□□□□□ -0.49
TP53-228ENST00000635293 PPP2R2AP63151 447 aa11.97□□□□□ -0.49
TP53-228ENST00000635293 PPIGQ13427 754 aaKnown RBP eCLIP11.97□□□□□ -0.496e-7■■□□□ 12.6
TP53-228ENST00000635293 AUHQ13825 339 aaKnown RBP11.97□□□□□ -0.49
TP53-228ENST00000635293 FASTKD3Q14CZ7 662 aaKnown RBP11.97□□□□□ -0.49
TP53-228ENST00000635293 RASA2Q15283 850 aa11.97□□□□□ -0.49
TP53-228ENST00000635293 FNBP1LQ5T0N5 605 aa11.97□□□□□ -0.49
TP53-228ENST00000635293 TDRPQ86YL5 185 aa11.97□□□□□ -0.49
TP53-228ENST00000635293 CCNYQ8ND76 341 aa11.97□□□□□ -0.49
TP53-228ENST00000635293 STKLD1Q8NE28 680 aa11.97□□□□□ -0.49
TP53-228ENST00000635293 ZNF461Q8TAF7 563 aa11.97□□□□□ -0.49
TP53-228ENST00000635293 CLSTN3Q9BQT9 956 aa11.97□□□□□ -0.49
TP53-228ENST00000635293 CNOT10Q9H9A5 744 aaKnown RBP11.97□□□□□ -0.49
TP53-228ENST00000635293 LRRC4CQ9HCJ2 640 aa11.97□□□□□ -0.49
TP53-228ENST00000635293 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.97□□□□□ -0.49
TP53-228ENST00000635293 DONSONQ9NYP3 566 aa11.97□□□□□ -0.49
TP53-228ENST00000635293 MARCH2Q9P0N8 246 aa11.97□□□□□ -0.49
TP53-228ENST00000635293 BCCIPQ9P287 314 aaKnown RBP eCLIP11.97□□□□□ -0.49
TP53-228ENST00000635293 IGSF9Q9P2J2 1179 aa11.97□□□□□ -0.49
TP53-228ENST00000635293 SLC12A6Q9UHW9 1150 aa11.97□□□□□ -0.49
TP53-228ENST00000635293 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.97□□□□□ -0.49
TP53-228ENST00000635293 CLUHO75153 1309 aa11.97□□□□□ -0.49
TP53-228ENST00000635293 KIAA0100Q14667 2235 aaKnown RBP11.97□□□□□ -0.49
TP53-228ENST00000635293 OBSL1O75147 1896 aa11.97□□□□□ -0.49
TP53-228ENST00000635293 NYNRINQ9P2P1 1898 aaKnown RBP11.97□□□□□ -0.49
TP53-228ENST00000635293 TLDC2A0PJX2 215 aa11.97□□□□□ -0.49
TP53-228ENST00000635293 MYO1CO00159 1063 aa11.97□□□□□ -0.49
TP53-228ENST00000635293 EBAG9O00559 213 aa11.97□□□□□ -0.49
TP53-228ENST00000635293 CSH1P0DML2 217 aa11.97□□□□□ -0.49
TP53-228ENST00000635293 CSH2P0DML3 217 aa11.97□□□□□ -0.49
TP53-228ENST00000635293 MLNP12872 115 aa11.97□□□□□ -0.49
TP53-228ENST00000635293 MAGOHP61326 146 aaKnown RBP11.97□□□□□ -0.49
TP53-228ENST00000635293 SARNPP82979 210 aaKnown RBP11.97□□□□□ -0.49
TP53-228ENST00000635293 GAD2Q05329 585 aa11.97□□□□□ -0.49
TP53-228ENST00000635293 WASHC5Q12768 1159 aa11.97□□□□□ -0.49
TP53-228ENST00000635293 EFEMP1Q12805 493 aa11.97□□□□□ -0.49
TP53-228ENST00000635293 RAB33AQ14088 237 aa11.97□□□□□ -0.49
TP53-228ENST00000635293 BBS9Q3SYG4 887 aa11.97□□□□□ -0.49
TP53-228ENST00000635293 C10orf120Q5SQS8 335 aa11.97□□□□□ -0.49
TP53-228ENST00000635293 SNX30Q5VWJ9 437 aa11.97□□□□□ -0.49
TP53-228ENST00000635293 TTC19Q6DKK2 380 aaPredicted RBP11.97□□□□□ -0.49
TP53-228ENST00000635293 TAOK1Q7L7X3 1001 aa11.97□□□□□ -0.49
TP53-228ENST00000635293 LRRC49Q8IUZ0 686 aa11.97□□□□□ -0.49
TP53-228ENST00000635293 CCDC13Q8IYE1 715 aa11.97□□□□□ -0.49
TP53-228ENST00000635293 TAB3Q8N5C8 712 aaPredicted RBP11.97□□□□□ -0.49
TP53-228ENST00000635293 BTN2A3PQ96KV6 586 aa11.97□□□□□ -0.49
TP53-228ENST00000635293 YME1L1Q96TA2 773 aa11.97□□□□□ -0.49
TP53-228ENST00000635293 SIK2Q9H0K1 926 aa11.97□□□□□ -0.49
TP53-228ENST00000635293 EPN3Q9H201 632 aa11.97□□□□□ -0.49
TP53-228ENST00000635293 VPS37BQ9H9H4 285 aa11.97□□□□□ -0.49
TP53-228ENST00000635293 TRHDEQ9UKU6 1024 aa11.97□□□□□ -0.49
TP53-228ENST00000635293 HBS1LQ9Y450 684 aaKnown RBP11.97□□□□□ -0.49
TP53-228ENST00000635293 SNX10Q9Y5X0 201 aa11.97□□□□□ -0.49
TP53-228ENST00000635293 HS3ST4Q9Y661 456 aa11.97□□□□□ -0.49
TP53-228ENST00000635293 MYO18AQ92614 2054 aaKnown RBP11.96□□□□□ -0.49
TP53-228ENST00000635293 ANAPC1Q9H1A4 1944 aa11.96□□□□□ -0.49
TP53-228ENST00000635293 EXOC1LA0A1B0GW35 172 aa11.96□□□□□ -0.49
TP53-228ENST00000635293 SMIM23A6NLE4 172 aa11.96□□□□□ -0.49
TP53-228ENST00000635293 E9PAM4 449 aa11.96□□□□□ -0.49
TP53-228ENST00000635293 METTL18O95568 372 aa11.96□□□□□ -0.49
TP53-228ENST00000635293 APRTP07741 180 aa11.96□□□□□ -0.49
TP53-228ENST00000635293 GSTA2P09210 222 aa11.96□□□□□ -0.49
TP53-228ENST00000635293 LSP1P33241 339 aa11.96□□□□□ -0.49
TP53-228ENST00000635293 MAGEA3P43357 314 aa11.96□□□□□ -0.49
TP53-228ENST00000635293 CCT5P48643 541 aa11.96□□□□□ -0.49
TP53-228ENST00000635293 MLLT6P55198 1093 aaPredicted RBP11.96□□□□□ -0.49
TP53-228ENST00000635293 NR1H3Q13133 447 aa11.96□□□□□ -0.49
TP53-228ENST00000635293 LONRF1Q17RB8 773 aa11.96□□□□□ -0.49
TP53-228ENST00000635293 PARP6Q2NL67 630 aa11.96□□□□□ -0.49
TP53-228ENST00000635293 KLHL38Q2WGJ6 581 aa11.96□□□□□ -0.49
TP53-228ENST00000635293 MSS51Q4VC12 460 aa11.96□□□□□ -0.49
TP53-228ENST00000635293 FAXCQ5TGI0 409 aa11.96□□□□□ -0.49
TP53-228ENST00000635293 NUGGCQ68CJ6 796 aa11.96□□□□□ -0.49
TP53-228ENST00000635293 ITPRIPL1Q6GPH6 555 aa11.96□□□□□ -0.49
TP53-228ENST00000635293 RWDD4Q6NW29 188 aaKnown RBP11.96□□□□□ -0.49
TP53-228ENST00000635293 FAM117BQ6P1L5 589 aa11.96□□□□□ -0.49
TP53-228ENST00000635293 KLHDC10Q6PID8 442 aa11.96□□□□□ -0.49
TP53-228ENST00000635293 RTL3Q8N8U3 475 aaKnown RBP11.96□□□□□ -0.49
TP53-228ENST00000635293 FBXO36Q8NEA4 188 aa11.96□□□□□ -0.49
TP53-228ENST00000635293 GPR152Q8TDT2 470 aa11.96□□□□□ -0.49
TP53-228ENST00000635293 TRMT2BQ96GJ1 504 aaKnown RBP11.96□□□□□ -0.49
TP53-228ENST00000635293 TSGA13Q96PP4 275 aa11.96□□□□□ -0.49
TP53-228ENST00000635293 FAM107BQ9H098 131 aa11.96□□□□□ -0.49
TP53-228ENST00000635293 EURLQ9NYK6 297 aa11.96□□□□□ -0.49
TP53-228ENST00000635293 PPARGC1AQ9UBK2 798 aaKnown RBP11.96□□□□□ -0.49
TP53-228ENST00000635293 SLC24A2Q9UI40 661 aa11.96□□□□□ -0.49
TP53-228ENST00000635293 NUDT5Q9UKK9 219 aa11.96□□□□□ -0.49
TP53-228ENST00000635293 SSX2IPQ9Y2D8 614 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms