RNA–Protein interactions for RNA: ENST00000631210.1

MECP2-220, Transcript of methyl-CpG binding protein 2, humanhuman

TSL 1 (best)

Gene MECP2, Length 490 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MECP2-220ENST00000631210 GTSE1Q9NYZ3 720 aa8.6□□□□□ -1.03
MECP2-220ENST00000631210 MPP6Q9NZW5 540 aa8.6□□□□□ -1.03
MECP2-220ENST00000631210 IGSF9Q9P2J2 1179 aa8.6□□□□□ -1.03
MECP2-220ENST00000631210 TBC1D14Q9P2M4 693 aa8.6□□□□□ -1.03
MECP2-220ENST00000631210 PPARGC1AQ9UBK2 798 aaKnown RBP8.6□□□□□ -1.03
MECP2-220ENST00000631210 LSM7Q9UK45 103 aaKnown RBP8.6□□□□□ -1.03
MECP2-220ENST00000631210 VANGL2Q9ULK5 521 aa8.6□□□□□ -1.03
MECP2-220ENST00000631210 ZNF510Q9Y2H8 683 aa8.6□□□□□ -1.03
MECP2-220ENST00000631210 MIA3Q5JRA6 1907 aa8.59□□□□□ -1.03
MECP2-220ENST00000631210 CCDC66A2RUB6 948 aa8.59□□□□□ -1.03
MECP2-220ENST00000631210 ANTXRLA6NF34 631 aa8.59□□□□□ -1.03
MECP2-220ENST00000631210 WASH4PA8MWX3 477 aa8.59□□□□□ -1.03
MECP2-220ENST00000631210 ZNF487B1APH4 448 aa8.59□□□□□ -1.03
MECP2-220ENST00000631210 TRIM24O15164 1050 aa8.59□□□□□ -1.03
MECP2-220ENST00000631210 HOXC11O43248 304 aaPredicted RBP8.59□□□□□ -1.03
MECP2-220ENST00000631210 KRT7P08729 469 aa8.59□□□□□ -1.03
MECP2-220ENST00000631210 CISD3P0C7P0 127 aa8.59□□□□□ -1.03
MECP2-220ENST00000631210 TNNT1P13805 278 aa8.59□□□□□ -1.03
MECP2-220ENST00000631210 AMPD1P23109 780 aa8.59□□□□□ -1.03
MECP2-220ENST00000631210 OPRD1P41143 372 aa8.59□□□□□ -1.03
MECP2-220ENST00000631210 CDH6P55285 790 aa8.59□□□□□ -1.03
MECP2-220ENST00000631210 GNG11P61952 73 aa8.59□□□□□ -1.03
MECP2-220ENST00000631210 ETF1P62495 437 aaKnown RBP8.59□□□□□ -1.03
MECP2-220ENST00000631210 MTA1Q13330 715 aa8.59□□□□□ -1.03
MECP2-220ENST00000631210 ZNF211Q13398 564 aaPredicted RBP8.59□□□□□ -1.03
MECP2-220ENST00000631210 RUNX3Q13761 415 aa8.59□□□□□ -1.03
MECP2-220ENST00000631210 PDK2Q15119 407 aa8.59□□□□□ -1.03
MECP2-220ENST00000631210 PDGFRLQ15198 375 aa8.59□□□□□ -1.03
MECP2-220ENST00000631210 HADHQ16836 314 aaKnown RBP8.59□□□□□ -1.03
MECP2-220ENST00000631210 ARL13BQ3SXY8 428 aa8.59□□□□□ -1.03
MECP2-220ENST00000631210 FSCBQ5H9T9 825 aa8.59□□□□□ -1.03
MECP2-220ENST00000631210 EFHC2Q5JST6 749 aa8.59□□□□□ -1.03
MECP2-220ENST00000631210 PAPD7Q5XG87 772 aaKnown RBP8.59□□□□□ -1.03
MECP2-220ENST00000631210 AFMIDQ63HM1 303 aa8.59□□□□□ -1.03
MECP2-220ENST00000631210 CXorf57Q6NSI4 855 aaKnown RBP8.59□□□□□ -1.03
MECP2-220ENST00000631210 SPOCD1Q6ZMY3 1216 aa8.59□□□□□ -1.03
MECP2-220ENST00000631210 TPGS1Q6ZTW0 290 aa8.59□□□□□ -1.03
MECP2-220ENST00000631210 RFX8Q6ZV50 586 aa8.59□□□□□ -1.03
MECP2-220ENST00000631210 KIAA0907Q7Z7F0 614 aaPredicted RBP8.59□□□□□ -1.03
MECP2-220ENST00000631210 VSIG1Q86XK7 387 aa8.59□□□□□ -1.03
MECP2-220ENST00000631210 SFTPA1Q8IWL2 248 aa8.59□□□□□ -1.03
MECP2-220ENST00000631210 NPWQ8N729 165 aa8.59□□□□□ -1.03
MECP2-220ENST00000631210 TTC16Q8NEE8 873 aa8.59□□□□□ -1.03
MECP2-220ENST00000631210 EXD1Q8NHP7 514 aa8.59□□□□□ -1.03
MECP2-220ENST00000631210 EZH1Q92800 747 aaPredicted RBP8.59□□□□□ -1.03
MECP2-220ENST00000631210 RNF25Q96BH1 459 aaPredicted RBP8.59□□□□□ -1.03
MECP2-220ENST00000631210 TRIM44Q96DX7 344 aaPredicted RBP8.59□□□□□ -1.03
MECP2-220ENST00000631210 NECAB3Q96P71 396 aaPredicted RBP8.59□□□□□ -1.03
MECP2-220ENST00000631210 RNF157Q96PX1 679 aa8.59□□□□□ -1.03
MECP2-220ENST00000631210 FBRSL1Q9HCM7 1045 aaKnown RBP8.59□□□□□ -1.03
MECP2-220ENST00000631210 ARHGEF4Q9NR80 690 aa8.59□□□□□ -1.03
MECP2-220ENST00000631210 TMEM248Q9NWD8 314 aa8.59□□□□□ -1.03
MECP2-220ENST00000631210 PLK2Q9NYY3 685 aa8.59□□□□□ -1.03
MECP2-220ENST00000631210 SLC12A6Q9UHW9 1150 aa8.59□□□□□ -1.03
MECP2-220ENST00000631210 FAM50BQ9Y247 325 aa8.59□□□□□ -1.03
MECP2-220ENST00000631210 JRKLQ9Y4A0 524 aa8.59□□□□□ -1.03
MECP2-220ENST00000631210 OR51B4Q9Y5P0 310 aa8.59□□□□□ -1.03
MECP2-220ENST00000631210 NYNRINQ9P2P1 1898 aaKnown RBP8.58□□□□□ -1.04
MECP2-220ENST00000631210 hCG_1818297A0A087WSY0 165 aa8.58□□□□□ -1.04
MECP2-220ENST00000631210 TCRBV7S2A1N4TA0A589 114 aa8.58□□□□□ -1.04
MECP2-220ENST00000631210 LRRD1A4D1F6 860 aa8.58□□□□□ -1.04
MECP2-220ENST00000631210 MIF4GDA9UHW6 222 aaKnown RBP8.58□□□□□ -1.04
MECP2-220ENST00000631210 F5H5T6 163 aa8.58□□□□□ -1.04
MECP2-220ENST00000631210 SLC9A3R1O14745 358 aaPredicted RBP8.58□□□□□ -1.04
MECP2-220ENST00000631210 CREB3O43889 395 aa8.58□□□□□ -1.04
MECP2-220ENST00000631210 KIF5CO60282 957 aa8.58□□□□□ -1.04
MECP2-220ENST00000631210 CACNG3O60359 315 aa8.58□□□□□ -1.04
MECP2-220ENST00000631210 TBL1XO60907 577 aa8.58□□□□□ -1.04
MECP2-220ENST00000631210 SRGAP2O75044 1071 aa8.58□□□□□ -1.04
MECP2-220ENST00000631210 KRT1P04264 644 aa8.58□□□□□ -1.04
MECP2-220ENST00000631210 KRT10P13645 584 aa8.58□□□□□ -1.04
MECP2-220ENST00000631210 RHOQP17081 205 aa8.58□□□□□ -1.04
MECP2-220ENST00000631210 ERCC2P18074 760 aa8.58□□□□□ -1.04
MECP2-220ENST00000631210 GJA4P35212 333 aa8.58□□□□□ -1.04
MECP2-220ENST00000631210 PTPN7P35236 360 aa8.58□□□□□ -1.04
MECP2-220ENST00000631210 CHKAP35790 457 aa8.58□□□□□ -1.04
MECP2-220ENST00000631210 SSR1P43307 286 aaKnown RBP8.58□□□□□ -1.04
MECP2-220ENST00000631210 IFNAR2P48551 515 aa8.58□□□□□ -1.04
MECP2-220ENST00000631210 SLC10A2Q12908 348 aaPredicted RBP8.58□□□□□ -1.04
MECP2-220ENST00000631210 KLF1Q13351 362 aaPredicted RBP8.58□□□□□ -1.04
MECP2-220ENST00000631210 TDGQ13569 410 aa8.58□□□□□ -1.04
MECP2-220ENST00000631210 LLGL1Q15334 1064 aa8.58□□□□□ -1.04
MECP2-220ENST00000631210 RPS6KA1Q15418 735 aa8.58□□□□□ -1.04
MECP2-220ENST00000631210 SIX1Q15475 284 aaPredicted RBP8.58□□□□□ -1.04
MECP2-220ENST00000631210 MPPE1Q53F39 396 aa8.58□□□□□ -1.04
MECP2-220ENST00000631210 ANKRD20A8PQ5CZ79 823 aa8.58□□□□□ -1.04
MECP2-220ENST00000631210 PPP6R3Q5H9R7 873 aaPredicted RBP8.58□□□□□ -1.04
MECP2-220ENST00000631210 MPP7Q5T2T1 576 aa8.58□□□□□ -1.04
MECP2-220ENST00000631210 NCBP2-AS2Q69YL0 99 aa8.58□□□□□ -1.04
MECP2-220ENST00000631210 SLC9A4Q6AI14 798 aa8.58□□□□□ -1.04
MECP2-220ENST00000631210 TXNDC11Q6PKC3 985 aa8.58□□□□□ -1.04
MECP2-220ENST00000631210 CHST9Q7L1S5 443 aa8.58□□□□□ -1.04
MECP2-220ENST00000631210 RNF135Q8IUD6 432 aa8.58□□□□□ -1.04
MECP2-220ENST00000631210 ARHGAP12Q8IWW6 846 aa8.58□□□□□ -1.04
MECP2-220ENST00000631210 RCOR2Q8IZ40 523 aa8.58□□□□□ -1.04
MECP2-220ENST00000631210 ZNF687Q8N1G0 1237 aa8.58□□□□□ -1.04
MECP2-220ENST00000631210 PLD5Q8N7P1 536 aa8.58□□□□□ -1.04
MECP2-220ENST00000631210 RTL3Q8N8U3 475 aaKnown RBP8.58□□□□□ -1.04
MECP2-220ENST00000631210 NETO2Q8NC67 525 aa8.58□□□□□ -1.04
MECP2-220ENST00000631210 TTC8Q8TAM2 541 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms