RNA–Protein interactions for RNA: ENST00000631057.2

GPC3-204, Transcript of glypican 3, humanhuman

TSL 1 (best) BASIC

Gene GPC3, Length 1,581 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-204ENST00000631057 MFHAS1Q9Y4C4 1052 aa8.29□□□□□ -1.08
GPC3-204ENST00000631057 C2orf71A6NGG8 1288 aa8.28□□□□□ -1.08
GPC3-204ENST00000631057 SPECC1L-ADORA2AF8WAN1 911 aa8.28□□□□□ -1.08
GPC3-204ENST00000631057 M0QYT0 321 aa8.28□□□□□ -1.08
GPC3-204ENST00000631057 CYB561D2O14569 222 aa8.28□□□□□ -1.08
GPC3-204ENST00000631057 NCAM2O15394 837 aa8.28□□□□□ -1.08
GPC3-204ENST00000631057 DYNC1LI2O43237 492 aaPredicted RBP8.28□□□□□ -1.08
GPC3-204ENST00000631057 MAGEC1O60732 1142 aa8.28□□□□□ -1.08
GPC3-204ENST00000631057 ENTPD5O75356 428 aa8.28□□□□□ -1.08
GPC3-204ENST00000631057 POLBP06746 335 aa8.28□□□□□ -1.08
GPC3-204ENST00000631057 FAM200BP0CF97 657 aa8.28□□□□□ -1.08
GPC3-204ENST00000631057 PTPN1P18031 435 aaKnown RBP8.28□□□□□ -1.08
GPC3-204ENST00000631057 GRK2P25098 689 aa8.28□□□□□ -1.08
GPC3-204ENST00000631057 PSMB4P28070 264 aa8.28□□□□□ -1.08
GPC3-204ENST00000631057 LRPAP1P30533 357 aa8.28□□□□□ -1.08
GPC3-204ENST00000631057 GCKP35557 465 aa8.28□□□□□ -1.08
GPC3-204ENST00000631057 PGM1P36871 562 aa8.28□□□□□ -1.08
GPC3-204ENST00000631057 PTDSS1P48651 473 aaKnown RBP8.28□□□□□ -1.08
GPC3-204ENST00000631057 PSEN2P49810 448 aa8.28□□□□□ -1.08
GPC3-204ENST00000631057 RAP1GDS1P52306 607 aa8.28□□□□□ -1.08
GPC3-204ENST00000631057 AQP5P55064 265 aa8.28□□□□□ -1.08
GPC3-204ENST00000631057 LILRA4P59901 499 aa8.28□□□□□ -1.08
GPC3-204ENST00000631057 PDE1BQ01064 536 aa8.28□□□□□ -1.08
GPC3-204ENST00000631057 DEUP1Q05D60 604 aa8.28□□□□□ -1.08
GPC3-204ENST00000631057 SOX4Q06945 474 aaPredicted RBP8.28□□□□□ -1.08
GPC3-204ENST00000631057 VAC14Q08AM6 782 aa8.28□□□□□ -1.08
GPC3-204ENST00000631057 SCAPQ12770 1279 aa8.28□□□□□ -1.08
GPC3-204ENST00000631057 FRG1Q14331 258 aaKnown RBP8.28□□□□□ -1.08
GPC3-204ENST00000631057 CCDC6Q16204 474 aa8.28□□□□□ -1.08
GPC3-204ENST00000631057 FAM110CQ1W6H9 321 aa8.28□□□□□ -1.08
GPC3-204ENST00000631057 DNAL1Q4LDG9 190 aa8.28□□□□□ -1.08
GPC3-204ENST00000631057 FASTKD1Q53R41 847 aaKnown RBP8.28□□□□□ -1.08
GPC3-204ENST00000631057 UBXN11Q5T124 520 aa8.28□□□□□ -1.08
GPC3-204ENST00000631057 ZNF618Q5T7W0 954 aa8.28□□□□□ -1.08
GPC3-204ENST00000631057 N4BP2L1Q5TBK1 243 aaPredicted RBP8.28□□□□□ -1.08
GPC3-204ENST00000631057 OTUD1Q5VV17 481 aaPredicted RBP8.28□□□□□ -1.08
GPC3-204ENST00000631057 RFWD3Q6PCD5 774 aa8.28□□□□□ -1.08
GPC3-204ENST00000631057 TMPRSS6Q8IU80 811 aa8.28□□□□□ -1.08
GPC3-204ENST00000631057 WDR75Q8IWA0 830 aaKnown RBP8.28□□□□□ -1.08
GPC3-204ENST00000631057 NME8Q8N427 588 aa8.28□□□□□ -1.08
GPC3-204ENST00000631057 CCNYQ8ND76 341 aa8.28□□□□□ -1.08
GPC3-204ENST00000631057 DNAJB3Q8WWF6 145 aa8.28□□□□□ -1.08
GPC3-204ENST00000631057 BRI3BPQ8WY22 251 aa8.28□□□□□ -1.08
GPC3-204ENST00000631057 STMN2Q93045 179 aa8.28□□□□□ -1.08
GPC3-204ENST00000631057 NTAN1Q96AB6 310 aa8.28□□□□□ -1.08
GPC3-204ENST00000631057 NAF1Q96HR8 494 aaKnown RBP8.28□□□□□ -1.08
GPC3-204ENST00000631057 CPNE1Q99829 537 aa8.28□□□□□ -1.08
GPC3-204ENST00000631057 TRIM56Q9BRZ2 755 aaKnown RBP8.28□□□□□ -1.08
GPC3-204ENST00000631057 MED10Q9BTT4 135 aa8.28□□□□□ -1.08
GPC3-204ENST00000631057 BRD8Q9H0E9 1235 aa8.28□□□□□ -1.08
GPC3-204ENST00000631057 TAS2R1Q9NYW7 299 aa8.28□□□□□ -1.08
GPC3-204ENST00000631057 SEPT10Q9P0V9 454 aa8.28□□□□□ -1.08
GPC3-204ENST00000631057 TAGLN3Q9UI15 199 aa8.28□□□□□ -1.08
GPC3-204ENST00000631057 SYNJ2BP-COX16A0A087WUM0 186 aa8.27□□□□□ -1.09
GPC3-204ENST00000631057 ERI2A8K979 691 aaKnown RBP8.27□□□□□ -1.09
GPC3-204ENST00000631057 B2RBV5 119 aa8.27□□□□□ -1.09
GPC3-204ENST00000631057 H0Y3Z8 333 aa8.27□□□□□ -1.09
GPC3-204ENST00000631057 TPP1O14773 563 aa8.27□□□□□ -1.09
GPC3-204ENST00000631057 DCLK1O15075 740 aa8.27□□□□□ -1.09
GPC3-204ENST00000631057 ADCY6O43306 1168 aa8.27□□□□□ -1.09
GPC3-204ENST00000631057 MTSS1O43312 755 aa8.27□□□□□ -1.09
GPC3-204ENST00000631057 CREB3O43889 395 aa8.27□□□□□ -1.09
GPC3-204ENST00000631057 PLIN3O60664 434 aa8.27□□□□□ -1.09
GPC3-204ENST00000631057 CIB2O75838 187 aa8.27□□□□□ -1.09
GPC3-204ENST00000631057 ALDOAP04075 364 aaKnown RBP8.27□□□□□ -1.09
GPC3-204ENST00000631057 SERPINE1P05121 402 aa8.27□□□□□ -1.09
GPC3-204ENST00000631057 ENO1P06733 434 aaKnown RBP8.27□□□□□ -1.09
GPC3-204ENST00000631057 SERPINA6P08185 405 aa8.27□□□□□ -1.09
GPC3-204ENST00000631057 ITGA2BP08514 1039 aa8.27□□□□□ -1.09
GPC3-204ENST00000631057 MX2P20592 715 aa8.27□□□□□ -1.09
GPC3-204ENST00000631057 ATP6V1C1P21283 382 aa8.27□□□□□ -1.09
GPC3-204ENST00000631057 GP5P40197 560 aa8.27□□□□□ -1.09
GPC3-204ENST00000631057 VHLP40337 213 aa8.27□□□□□ -1.09
GPC3-204ENST00000631057 HCAR3P49019 387 aa8.27□□□□□ -1.09
GPC3-204ENST00000631057 ZNF135P52742 658 aaPredicted RBP8.27□□□□□ -1.09
GPC3-204ENST00000631057 CRYBB1P53674 252 aaPredicted RBP8.27□□□□□ -1.09
GPC3-204ENST00000631057 ADAM17P78536 824 aa8.27□□□□□ -1.09
GPC3-204ENST00000631057 CRADDP78560 199 aa8.27□□□□□ -1.09
GPC3-204ENST00000631057 PDE1CQ14123 709 aaPredicted RBP8.27□□□□□ -1.09
GPC3-204ENST00000631057 KPNB1Q14974 876 aaKnown RBP8.27□□□□□ -1.09
GPC3-204ENST00000631057 INTS6LQ5JSJ4 861 aaKnown RBP8.27□□□□□ -1.09
GPC3-204ENST00000631057 GRTP1Q5TC63 336 aa8.27□□□□□ -1.09
GPC3-204ENST00000631057 C6orf163Q5TEZ5 329 aa8.27□□□□□ -1.09
GPC3-204ENST00000631057 BSPRYQ5W0U4 402 aa8.27□□□□□ -1.09
GPC3-204ENST00000631057 CES4AQ5XG92 561 aa8.27□□□□□ -1.09
GPC3-204ENST00000631057 MBLAC2Q68D91 279 aa8.27□□□□□ -1.09
GPC3-204ENST00000631057 DSTYKQ6XUX3 929 aa8.27□□□□□ -1.09
GPC3-204ENST00000631057 RFX8Q6ZV50 586 aa8.27□□□□□ -1.09
GPC3-204ENST00000631057 LMNTD2Q8IXW0 634 aa8.27□□□□□ -1.09
GPC3-204ENST00000631057 ZNF567Q8N184 647 aa8.27□□□□□ -1.09
GPC3-204ENST00000631057 NPLOC4Q8TAT6 608 aa8.27□□□□□ -1.09
GPC3-204ENST00000631057 PPP4R1Q8TF05 950 aa8.27□□□□□ -1.09
GPC3-204ENST00000631057 ARNTL2Q8WYA1 636 aa8.27□□□□□ -1.09
GPC3-204ENST00000631057 MIEF2Q96C03 454 aa8.27□□□□□ -1.09
GPC3-204ENST00000631057 RILPQ96NA2 401 aa8.27□□□□□ -1.09
GPC3-204ENST00000631057 PRDM12Q9H4Q4 367 aa8.27□□□□□ -1.09
GPC3-204ENST00000631057 LRRC40Q9H9A6 602 aa8.27□□□□□ -1.09
GPC3-204ENST00000631057 GOLGA2P5Q9HBQ8 144 aa8.27□□□□□ -1.09
GPC3-204ENST00000631057 RNF19AQ9NV58 838 aa8.27□□□□□ -1.09
GPC3-204ENST00000631057 SYBUQ9NX95 663 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms