RNA–Protein interactions for RNA: ENST00000629912.1

NEK3-211, Transcript of NIMA related kinase 3, humanhuman

TSL 5 BASIC

Gene NEK3, Length 141 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-211ENST00000629912 GSDMBQ8TAX9 411 aa5.72□□□□□ -1.49
NEK3-211ENST00000629912 ZSCAN18Q8TBC5 510 aaPredicted RBP5.72□□□□□ -1.49
NEK3-211ENST00000629912 ADAM32Q8TC27 787 aa5.72□□□□□ -1.49
NEK3-211ENST00000629912 HASPINQ8TF76 798 aa5.72□□□□□ -1.49
NEK3-211ENST00000629912 C2orf15Q8WU43 125 aaKnown RBP5.72□□□□□ -1.49
NEK3-211ENST00000629912 DYDC1Q8WWB3 177 aa5.72□□□□□ -1.49
NEK3-211ENST00000629912 FATE1Q969F0 183 aa5.72□□□□□ -1.49
NEK3-211ENST00000629912 TTC17Q96AE7 1141 aa5.72□□□□□ -1.49
NEK3-211ENST00000629912 MTBPQ96DY7 904 aa5.72□□□□□ -1.49
NEK3-211ENST00000629912 SLC39A13Q96H72 371 aa5.72□□□□□ -1.49
NEK3-211ENST00000629912 CABS1Q96KC9 395 aa5.72□□□□□ -1.49
NEK3-211ENST00000629912 SPATA17Q96L03 361 aa5.72□□□□□ -1.49
NEK3-211ENST00000629912 TEKT5Q96M29 485 aa5.72□□□□□ -1.49
NEK3-211ENST00000629912 TOX2Q96NM4 488 aa5.72□□□□□ -1.49
NEK3-211ENST00000629912 PAFAH2Q99487 392 aa5.72□□□□□ -1.49
NEK3-211ENST00000629912 PLCD4Q9BRC7 762 aa5.72□□□□□ -1.49
NEK3-211ENST00000629912 NSRP1Q9H0G5 558 aaKnown RBP5.72□□□□□ -1.49
NEK3-211ENST00000629912 VPS11Q9H270 941 aa5.72□□□□□ -1.49
NEK3-211ENST00000629912 KDM4CQ9H3R0 1056 aa5.72□□□□□ -1.49
NEK3-211ENST00000629912 RABEP2Q9H5N1 569 aa5.72□□□□□ -1.49
NEK3-211ENST00000629912 PLAC1Q9HBJ0 212 aa5.72□□□□□ -1.49
NEK3-211ENST00000629912 PAK6Q9NQU5 681 aaPredicted RBP5.72□□□□□ -1.49
NEK3-211ENST00000629912 CLIC5Q9NZA1 410 aa5.72□□□□□ -1.49
NEK3-211ENST00000629912 COX16Q9P0S2 106 aa5.72□□□□□ -1.49
NEK3-211ENST00000629912 DNAJB4Q9UDY4 337 aa5.72□□□□□ -1.49
NEK3-211ENST00000629912 ADAM28Q9UKQ2 775 aa5.72□□□□□ -1.49
NEK3-211ENST00000629912 OGDHLQ9ULD0 1010 aa5.72□□□□□ -1.49
NEK3-211ENST00000629912 TLR6Q9Y2C9 796 aa5.72□□□□□ -1.49
NEK3-211ENST00000629912 TTLL3Q9Y4R7 772 aa5.72□□□□□ -1.49
NEK3-211ENST00000629912 PCDHA11Q9Y5I1 949 aa5.72□□□□□ -1.49
NEK3-211ENST00000629912 DOCK4Q8N1I0 1966 aa5.72□□□□□ -1.49
NEK3-211ENST00000629912 FNDC1Q4ZHG4 1894 aaPredicted RBP5.72□□□□□ -1.49
NEK3-211ENST00000629912 TET1Q8NFU7 2136 aa5.72□□□□□ -1.49
NEK3-211ENST00000629912 SHROOM3Q8TF72 1996 aa5.71□□□□□ -1.49
NEK3-211ENST00000629912 GOLGA6L7A0A1B0GV03 622 aa5.71□□□□□ -1.5
NEK3-211ENST00000629912 LOC101059915A0A1B0GWI6 518 aaPredicted RBP5.71□□□□□ -1.5
NEK3-211ENST00000629912 CCT8L1PA6NM43 557 aa5.71□□□□□ -1.5
NEK3-211ENST00000629912 TCP11X1B4DZS4 312 aa5.71□□□□□ -1.5
NEK3-211ENST00000629912 TM9SF1O15321 606 aa5.71□□□□□ -1.5
NEK3-211ENST00000629912 SNX3O60493 162 aa5.71□□□□□ -1.5
NEK3-211ENST00000629912 SPAG7O75391 227 aa5.71□□□□□ -1.5
NEK3-211ENST00000629912 PAGE1O75459 146 aa5.71□□□□□ -1.5
NEK3-211ENST00000629912 KRT37O76014 449 aa5.71□□□□□ -1.5
NEK3-211ENST00000629912 RTN3O95197 1032 aaPredicted RBP5.71□□□□□ -1.5
NEK3-211ENST00000629912 AP2A1O95782 977 aa5.71□□□□□ -1.5
NEK3-211ENST00000629912 CPP00450 1065 aa5.71□□□□□ -1.5
NEK3-211ENST00000629912 OAS1P00973 400 aaKnown RBP5.71□□□□□ -1.5
NEK3-211ENST00000629912 GALTP07902 379 aa5.71□□□□□ -1.5
NEK3-211ENST00000629912 INHBAP08476 426 aa5.71□□□□□ -1.5
NEK3-211ENST00000629912 SNRPAP09012 282 aaKnown RBP5.71□□□□□ -1.5
NEK3-211ENST00000629912 KRT4P19013 534 aa5.71□□□□□ -1.5
NEK3-211ENST00000629912 IBSPP21815 317 aaPredicted RBP5.71□□□□□ -1.5
NEK3-211ENST00000629912 PTPN3P26045 913 aa5.71□□□□□ -1.5
NEK3-211ENST00000629912 CNTFP26441 200 aa5.71□□□□□ -1.5
NEK3-211ENST00000629912 EPHB2P29323 1055 aa5.71□□□□□ -1.5
NEK3-211ENST00000629912 FOXN2P32314 431 aa5.71□□□□□ -1.5
NEK3-211ENST00000629912 GBP2P32456 591 aaPredicted RBP5.71□□□□□ -1.5
NEK3-211ENST00000629912 RPA3P35244 121 aaPredicted RBP5.71□□□□□ -1.5
NEK3-211ENST00000629912 GARSP41250 739 aaKnown RBP5.71□□□□□ -1.5
NEK3-211ENST00000629912 IFNAR2P48551 515 aa5.71□□□□□ -1.5
NEK3-211ENST00000629912 FAAP100Q0VG06 881 aa5.71□□□□□ -1.5
NEK3-211ENST00000629912 MTA1Q13330 715 aa5.71□□□□□ -1.5
NEK3-211ENST00000629912 PDK4Q16654 411 aa5.71□□□□□ -1.5
NEK3-211ENST00000629912 CTXN3Q4LDR2 81 aa5.71□□□□□ -1.5
NEK3-211ENST00000629912 STXBP5Q5T5C0 1151 aa5.71□□□□□ -1.5
NEK3-211ENST00000629912 FAM171A1Q5VUB5 890 aa5.71□□□□□ -1.5
NEK3-211ENST00000629912 C1orf53Q5VUE5 145 aa5.71□□□□□ -1.5
NEK3-211ENST00000629912 ARMC3Q5W041 872 aa5.71□□□□□ -1.5
NEK3-211ENST00000629912 KCTD11Q693B1 232 aa5.71□□□□□ -1.5
NEK3-211ENST00000629912 ITPRIPL1Q6GPH6 555 aa5.71□□□□□ -1.5
NEK3-211ENST00000629912 ZNF280DQ6N043 979 aa5.71□□□□□ -1.5
NEK3-211ENST00000629912 CAPN12Q6ZSI9 719 aa5.71□□□□□ -1.5
NEK3-211ENST00000629912 CTU1Q7Z7A3 348 aaKnown RBP5.71□□□□□ -1.5
NEK3-211ENST00000629912 PRPF39Q86UA1 669 aaKnown RBP5.71□□□□□ -1.5
NEK3-211ENST00000629912 TAX1BP1Q86VP1 789 aa5.71□□□□□ -1.5
NEK3-211ENST00000629912 NPAS4Q8IUM7 802 aa5.71□□□□□ -1.5
NEK3-211ENST00000629912 SCN4BQ8IWT1 228 aa5.71□□□□□ -1.5
NEK3-211ENST00000629912 ABI1Q8IZP0 508 aa5.71□□□□□ -1.5
NEK3-211ENST00000629912 OTUD6BQ8N6M0 293 aa5.71□□□□□ -1.5
NEK3-211ENST00000629912 PDCD7Q8N8D1 485 aaKnown RBP5.71□□□□□ -1.5
NEK3-211ENST00000629912 ANKS4BQ8N8V4 417 aa5.71□□□□□ -1.5
NEK3-211ENST00000629912 ANKRD42Q8N9B4 389 aa5.71□□□□□ -1.5
NEK3-211ENST00000629912 SPPL2BQ8TCT7 592 aa5.71□□□□□ -1.5
NEK3-211ENST00000629912 MGARPQ8TDB4 240 aa5.71□□□□□ -1.5
NEK3-211ENST00000629912 LRRN4Q8WUT4 740 aa5.71□□□□□ -1.5
NEK3-211ENST00000629912 ARNTL2Q8WYA1 636 aa5.71□□□□□ -1.5
NEK3-211ENST00000629912 CASP10Q92851 521 aa5.71□□□□□ -1.5
NEK3-211ENST00000629912 RNF34Q969K3 372 aa5.71□□□□□ -1.5
NEK3-211ENST00000629912 TBC1D31Q96DN5 1066 aa5.71□□□□□ -1.5
NEK3-211ENST00000629912 STAMBPL1Q96FJ0 436 aa5.71□□□□□ -1.5
NEK3-211ENST00000629912 CFAP36Q96G28 342 aa5.71□□□□□ -1.5
NEK3-211ENST00000629912 OXNAD1Q96HP4 312 aaPredicted RBP5.71□□□□□ -1.5
NEK3-211ENST00000629912 SERPINB11Q96P15 392 aa5.71□□□□□ -1.5
NEK3-211ENST00000629912 PPP1R2P1Q96PQ5 205 aa5.71□□□□□ -1.5
NEK3-211ENST00000629912 IL12RB2Q99665 862 aa5.71□□□□□ -1.5
NEK3-211ENST00000629912 ELAC2Q9BQ52 826 aaKnown RBP5.71□□□□□ -1.5
NEK3-211ENST00000629912 MRPL9Q9BYD2 267 aaKnown RBP5.71□□□□□ -1.5
NEK3-211ENST00000629912 GPR62Q9BZJ7 368 aa5.71□□□□□ -1.5
NEK3-211ENST00000629912 UNC93B1Q9H1C4 597 aa5.71□□□□□ -1.5
NEK3-211ENST00000629912 RETREG1Q9H6L5 497 aa5.71□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms