RNA–Protein interactions for RNA: ENST00000629725.2

TARDBP-228, Transcript of TAR DNA binding protein, humanhuman

TSL 5 BASIC

Gene TARDBP, Length 1,031 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-228ENST00000629725 ARID1BQ8NFD5 2236 aaPredicted RBP20.92■□□□□ 0.94
TARDBP-228ENST00000629725 A0A1W2PR77 199 aa20.92■□□□□ 0.94
TARDBP-228ENST00000629725 YJEFN3A6XGL0 299 aa20.92■□□□□ 0.94
TARDBP-228ENST00000629725 E7ENQ6 273 aa20.92■□□□□ 0.94
TARDBP-228ENST00000629725 WNT9AO14904 365 aa20.92■□□□□ 0.94
TARDBP-228ENST00000629725 XPO1O14980 1071 aaKnown RBP20.92■□□□□ 0.94
TARDBP-228ENST00000629725 MSI1O43347 362 aaKnown RBP20.92■□□□□ 0.94
TARDBP-228ENST00000629725 BRINP1O60477 761 aa20.92■□□□□ 0.94
TARDBP-228ENST00000629725 ACTN2P35609 894 aa20.92■□□□□ 0.94
TARDBP-228ENST00000629725 ME1P48163 572 aa20.92■□□□□ 0.94
TARDBP-228ENST00000629725 ADIGQ0VDE8 80 aa20.92■□□□□ 0.94
TARDBP-228ENST00000629725 BNIP3Q12983 259 aa20.92■□□□□ 0.94
TARDBP-228ENST00000629725 KRT39Q6A163 491 aa20.92■□□□□ 0.94
TARDBP-228ENST00000629725 MMAAQ8IVH4 418 aaKnown RBP20.92■□□□□ 0.94
TARDBP-228ENST00000629725 MFN1Q8IWA4 741 aa20.92■□□□□ 0.94
TARDBP-228ENST00000629725 FAM186BQ8IYM0 893 aa20.92■□□□□ 0.94
TARDBP-228ENST00000629725 TTC17Q96AE7 1141 aa20.92■□□□□ 0.94
TARDBP-228ENST00000629725 PAGE5Q96GU1 130 aa20.92■□□□□ 0.94
TARDBP-228ENST00000629725 SERAC1Q96JX3 654 aa20.92■□□□□ 0.94
TARDBP-228ENST00000629725 IRX2Q9BZI1 471 aaPredicted RBP20.92■□□□□ 0.94
TARDBP-228ENST00000629725 PCDHA7Q9UN72 937 aa20.92■□□□□ 0.94
TARDBP-228ENST00000629725 TLR4O00206 839 aa20.91■□□□□ 0.94
TARDBP-228ENST00000629725 MAST4O15021 2626 aa20.91■□□□□ 0.94
TARDBP-228ENST00000629725 IRAK2O43187 625 aa20.91■□□□□ 0.94
TARDBP-228ENST00000629725 CKMT2P17540 419 aa20.91■□□□□ 0.94
TARDBP-228ENST00000629725 CCR5P51681 352 aa20.91■□□□□ 0.94
TARDBP-228ENST00000629725 CXADRP78310 365 aa20.91■□□□□ 0.94
TARDBP-228ENST00000629725 CFHR1Q03591 330 aa20.91■□□□□ 0.94
TARDBP-228ENST00000629725 TLE3Q04726 772 aa20.91■□□□□ 0.94
TARDBP-228ENST00000629725 ENPEPQ07075 957 aa20.91■□□□□ 0.94
TARDBP-228ENST00000629725 CCDC173Q0VFZ6 552 aa20.91■□□□□ 0.94
TARDBP-228ENST00000629725 GOLGA7BQ2TAP0 167 aa20.91■□□□□ 0.94
TARDBP-228ENST00000629725 SLC45A4Q5BKX6 768 aa20.91■□□□□ 0.94
TARDBP-228ENST00000629725 OXR1Q8N573 874 aa20.91■□□□□ 0.94
TARDBP-228ENST00000629725 ERVMER34-1Q9H9K5 563 aa20.91■□□□□ 0.94
TARDBP-228ENST00000629725 NYNRINQ9P2P1 1898 aaKnown RBP20.91■□□□□ 0.94
TARDBP-228ENST00000629725 TSPAN16Q9UKR8 245 aa20.91■□□□□ 0.94
TARDBP-228ENST00000629725 CLCA2Q9UQC9 943 aa20.91■□□□□ 0.94
TARDBP-228ENST00000629725 GOLGA6L7A0A1B0GV03 622 aa20.9■□□□□ 0.94
TARDBP-228ENST00000629725 CAPN8A6NHC0 703 aa20.9■□□□□ 0.94
TARDBP-228ENST00000629725 ASLP04424 464 aa20.9■□□□□ 0.94
TARDBP-228ENST00000629725 GLDCP23378 1020 aa20.9■□□□□ 0.94
TARDBP-228ENST00000629725 SLC8A1P32418 973 aa20.9■□□□□ 0.94
TARDBP-228ENST00000629725 CSKP41240 450 aa20.9■□□□□ 0.94
TARDBP-228ENST00000629725 RXRGP48443 463 aa20.9■□□□□ 0.94
TARDBP-228ENST00000629725 SLC11A2P49281 568 aa20.9■□□□□ 0.94
TARDBP-228ENST00000629725 NXPH1P58417 271 aa20.9■□□□□ 0.94
TARDBP-228ENST00000629725 ARID5BQ14865 1188 aa20.9■□□□□ 0.94
TARDBP-228ENST00000629725 NFIL3Q16649 462 aa20.9■□□□□ 0.94
TARDBP-228ENST00000629725 FAM133BQ5BKY9 247 aaKnown RBP20.9■□□□□ 0.94
TARDBP-228ENST00000629725 C9orf64Q5T6V5 341 aa20.9■□□□□ 0.94
TARDBP-228ENST00000629725 SFMBT2Q5VUG0 894 aa20.9■□□□□ 0.94
TARDBP-228ENST00000629725 UNC45BQ8IWX7 931 aa20.9■□□□□ 0.94
TARDBP-228ENST00000629725 SIX6OS1Q8N1H7 587 aa20.9■□□□□ 0.94
TARDBP-228ENST00000629725 CACTIN-AS1Q8N1I8 211 aa20.9■□□□□ 0.94
TARDBP-228ENST00000629725 FIBINQ8TAL6 211 aa20.9■□□□□ 0.94
TARDBP-228ENST00000629725 SEMA4DQ92854 862 aa20.9■□□□□ 0.94
TARDBP-228ENST00000629725 TATDN2Q93075 761 aa20.9■□□□□ 0.94
TARDBP-228ENST00000629725 LMLNQ96KR4 655 aa20.9■□□□□ 0.94
TARDBP-228ENST00000629725 STIM2Q9P246 746 aa20.9■□□□□ 0.94
TARDBP-228ENST00000629725 HESX1Q9UBX0 185 aa20.9■□□□□ 0.94
TARDBP-228ENST00000629725 TPX2Q9ULW0 747 aaKnown RBP20.9■□□□□ 0.94
TARDBP-228ENST00000629725 TARSL2A2RTX5 802 aaKnown RBP20.89■□□□□ 0.93
TARDBP-228ENST00000629725 C10orf142B7Z368 130 aa20.89■□□□□ 0.93
TARDBP-228ENST00000629725 ACTN4O43707 911 aaKnown RBP20.89■□□□□ 0.93
TARDBP-228ENST00000629725 SLC6A4P31645 630 aa20.89■□□□□ 0.93
TARDBP-228ENST00000629725 GTF2H1P32780 548 aa20.89■□□□□ 0.93
TARDBP-228ENST00000629725 PSMC2P35998 433 aaKnown RBP20.89■□□□□ 0.93
TARDBP-228ENST00000629725 BST2Q10589 180 aaKnown RBP20.89■□□□□ 0.93
TARDBP-228ENST00000629725 TBC1D25Q3MII6 688 aa20.89■□□□□ 0.93
TARDBP-228ENST00000629725 FOXD4L6Q3SYB3 417 aaPredicted RBP20.89■□□□□ 0.93
TARDBP-228ENST00000629725 NUGGCQ68CJ6 796 aa20.89■□□□□ 0.93
TARDBP-228ENST00000629725 PCSK4Q6UW60 755 aa20.89■□□□□ 0.93
TARDBP-228ENST00000629725 FOXD4L3Q6VB84 417 aaPredicted RBP20.89■□□□□ 0.93
TARDBP-228ENST00000629725 SND1Q7KZF4 910 aaKnown RBP eCLIP20.89■□□□□ 0.93
TARDBP-228ENST00000629725 ERICH1Q86X53 443 aa20.89■□□□□ 0.93
TARDBP-228ENST00000629725 SPACA3Q8IXA5 215 aa20.89■□□□□ 0.93
TARDBP-228ENST00000629725 KDM1BQ8NB78 822 aa20.89■□□□□ 0.93
TARDBP-228ENST00000629725 FBXL13Q8NEE6 735 aa20.89■□□□□ 0.93
TARDBP-228ENST00000629725 OR14C36Q8NHC7 312 aa20.89■□□□□ 0.93
TARDBP-228ENST00000629725 RFFLQ8WZ73 363 aa20.89■□□□□ 0.93
TARDBP-228ENST00000629725 MRGPRX3Q96LB0 322 aa20.89■□□□□ 0.93
TARDBP-228ENST00000629725 RAB20Q9NX57 234 aa20.89■□□□□ 0.93
TARDBP-228ENST00000629725 INTS6Q9UL03 887 aaKnown RBP20.89■□□□□ 0.93
TARDBP-228ENST00000629725 TYW5A2RUC4 315 aaKnown RBP20.88■□□□□ 0.93
TARDBP-228ENST00000629725 J3QKU1 62 aa20.88■□□□□ 0.93
TARDBP-228ENST00000629725 ERVH48-1M5A8F1 160 aa20.88■□□□□ 0.93
TARDBP-228ENST00000629725 ACSL4O60488 711 aa20.88■□□□□ 0.93
TARDBP-228ENST00000629725 IGLV3-27P01718 113 aa20.88■□□□□ 0.93
TARDBP-228ENST00000629725 RPL13P26373 211 aaKnown RBP20.88■□□□□ 0.93
TARDBP-228ENST00000629725 ADPRHP54922 357 aa20.88■□□□□ 0.93
TARDBP-228ENST00000629725 INSM1Q01101 510 aaPredicted RBP20.88■□□□□ 0.93
TARDBP-228ENST00000629725 SGO2Q562F6 1265 aa20.88■□□□□ 0.93
TARDBP-228ENST00000629725 AADATQ8N5Z0 425 aa20.88■□□□□ 0.93
TARDBP-228ENST00000629725 HJURPQ8NCD3 748 aaPredicted RBP20.88■□□□□ 0.93
TARDBP-228ENST00000629725 CNGB3Q9NQW8 809 aa20.88■□□□□ 0.93
TARDBP-228ENST00000629725 TBC1D3DA0A087WVF3 549 aa20.87■□□□□ 0.93
TARDBP-228ENST00000629725 TBC1D3IA0A087WXS9 549 aa20.87■□□□□ 0.93
TARDBP-228ENST00000629725 TBC1D3EA0A087X179 549 aa20.87■□□□□ 0.93
TARDBP-228ENST00000629725 TBC1D3KA0A087X1G2 549 aa20.87■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms