RNA–Protein interactions for RNA: ENST00000627620.2

SCN8A-209, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN8A, Length 5,943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-209ENST00000627620 USP39Q53GS9 565 aaKnown RBP13.07□□□□□ -0.32
SCN8A-209ENST00000627620 C16orf59Q7L2K0 433 aa13.07□□□□□ -0.32
SCN8A-209ENST00000627620 OR56A4Q8NGH8 313 aa13.07□□□□□ -0.32
SCN8A-209ENST00000627620 DNAJC18Q9H819 358 aa13.07□□□□□ -0.32
SCN8A-209ENST00000627620 UXTQ9UBK9 157 aaPredicted RBP13.07□□□□□ -0.32
SCN8A-209ENST00000627620 UBA2Q9UBT2 640 aaPredicted RBP13.07□□□□□ -0.32
SCN8A-209ENST00000627620 F8VP50 259 aa13.07□□□□□ -0.32
SCN8A-209ENST00000627620 PSMD12O00232 456 aaPredicted RBP13.07□□□□□ -0.32
SCN8A-209ENST00000627620 SEC22BO75396 215 aa13.07□□□□□ -0.32
SCN8A-209ENST00000627620 CYP7B1O75881 506 aa13.07□□□□□ -0.32
SCN8A-209ENST00000627620 DLGAP3O95886 979 aa13.07□□□□□ -0.32
SCN8A-209ENST00000627620 HOXC6P09630 235 aa13.07□□□□□ -0.32
SCN8A-209ENST00000627620 RBL1P28749 1068 aa13.07□□□□□ -0.32
SCN8A-209ENST00000627620 BCL2L1Q07817 233 aa13.07□□□□□ -0.32
SCN8A-209ENST00000627620 NCF4Q15080 339 aa13.07□□□□□ -0.32
SCN8A-209ENST00000627620 OASLQ15646 514 aaKnown RBP13.07□□□□□ -0.32
SCN8A-209ENST00000627620 IZUMO2Q6UXV1 221 aa13.07□□□□□ -0.32
SCN8A-209ENST00000627620 FGD2Q7Z6J4 655 aa13.07□□□□□ -0.32
SCN8A-209ENST00000627620 ILDR1Q86SU0 546 aaPredicted RBP13.07□□□□□ -0.32
SCN8A-209ENST00000627620 GAD1Q99259 594 aa13.07□□□□□ -0.32
SCN8A-209ENST00000627620 KLHL28Q9NXS3 571 aa13.07□□□□□ -0.32
SCN8A-209ENST00000627620 NDUFAF1Q9Y375 327 aa13.07□□□□□ -0.32
SCN8A-209ENST00000627620 ADGRA3Q8IWK6 1321 aa13.07□□□□□ -0.32
SCN8A-209ENST00000627620 FAM153BP0C7A2 387 aa13.06□□□□□ -0.32
SCN8A-209ENST00000627620 PTPN3P26045 913 aa13.06□□□□□ -0.32
SCN8A-209ENST00000627620 PRKAA2P54646 552 aa13.06□□□□□ -0.32
SCN8A-209ENST00000627620 FAM153CQ494X1 144 aa13.06□□□□□ -0.32
SCN8A-209ENST00000627620 CCDC103Q8IW40 242 aa13.06□□□□□ -0.32
SCN8A-209ENST00000627620 TMEM86AQ8N2M4 240 aa13.06□□□□□ -0.32
SCN8A-209ENST00000627620 MCOLN3Q8TDD5 553 aa13.06□□□□□ -0.32
SCN8A-209ENST00000627620 TRPC4APQ8TEL6 797 aa13.06□□□□□ -0.32
SCN8A-209ENST00000627620 HDAC7Q8WUI4 952 aa13.06□□□□□ -0.32
SCN8A-209ENST00000627620 MTMR9Q96QG7 549 aa13.06□□□□□ -0.32
SCN8A-209ENST00000627620 PRRG3Q9BZD7 231 aa13.06□□□□□ -0.32
SCN8A-209ENST00000627620 CXorf56Q9H5V9 222 aa13.06□□□□□ -0.32
SCN8A-209ENST00000627620 NUDT5Q9UKK9 219 aa13.06□□□□□ -0.32
SCN8A-209ENST00000627620 ITSN1Q15811 1721 aa13.06□□□□□ -0.32
SCN8A-209ENST00000627620 CNOT3O75175 753 aaKnown RBP13.06□□□□□ -0.32
SCN8A-209ENST00000627620 UBA1P22314 1058 aaKnown RBP13.06□□□□□ -0.32
SCN8A-209ENST00000627620 FKBP1AP62942 108 aaKnown RBP13.06□□□□□ -0.32
SCN8A-209ENST00000627620 ILF2Q12905 390 aaKnown RBP13.06□□□□□ -0.32
SCN8A-209ENST00000627620 RRP1BQ14684 758 aaKnown RBP13.06□□□□□ -0.32
SCN8A-209ENST00000627620 TRMT5Q32P41 509 aaKnown RBP13.06□□□□□ -0.32
SCN8A-209ENST00000627620 MILR1Q7Z6M3 343 aa13.06□□□□□ -0.32
SCN8A-209ENST00000627620 LUZP2Q86TE4 346 aa13.06□□□□□ -0.32
SCN8A-209ENST00000627620 METTL6Q8TCB7 284 aa13.06□□□□□ -0.32
SCN8A-209ENST00000627620 SENP8Q96LD8 212 aa13.06□□□□□ -0.32
SCN8A-209ENST00000627620 ADAM2Q99965 735 aa13.06□□□□□ -0.32
SCN8A-209ENST00000627620 ROGDIQ9GZN7 287 aa13.06□□□□□ -0.32
SCN8A-209ENST00000627620 CROTQ9UKG9 612 aa13.06□□□□□ -0.32
SCN8A-209ENST00000627620 NDUFB5O43674 189 aa13.06□□□□□ -0.32
SCN8A-209ENST00000627620 PARNO95453 639 aaKnown RBP13.06□□□□□ -0.32
SCN8A-209ENST00000627620 TNNI3P19429 210 aa13.06□□□□□ -0.32
SCN8A-209ENST00000627620 MMP13P45452 471 aa13.06□□□□□ -0.32
SCN8A-209ENST00000627620 FAAP100Q0VG06 881 aa13.06□□□□□ -0.32
SCN8A-209ENST00000627620 DPYSL3Q14195 570 aa13.06□□□□□ -0.32
SCN8A-209ENST00000627620 FASTKQ14296 549 aaKnown RBP13.06□□□□□ -0.32
SCN8A-209ENST00000627620 VAT1Q99536 393 aa13.06□□□□□ -0.32
SCN8A-209ENST00000627620 CDHR5Q9HBB8 845 aa13.06□□□□□ -0.32
SCN8A-209ENST00000627620 KLHL20Q9Y2M5 609 aa13.06□□□□□ -0.32
SCN8A-209ENST00000627620 BTN3A1O00481 513 aa13.06□□□□□ -0.32
SCN8A-209ENST00000627620 FASP25445 335 aa13.06□□□□□ -0.32
SCN8A-209ENST00000627620 FMO4P31512 558 aa13.06□□□□□ -0.32
SCN8A-209ENST00000627620 KRT20P35900 424 aa13.06□□□□□ -0.32
SCN8A-209ENST00000627620 DLG4P78352 724 aa13.06□□□□□ -0.32
SCN8A-209ENST00000627620 ST3GAL1Q11201 340 aa13.06□□□□□ -0.32
SCN8A-209ENST00000627620 TRIM16LQ309B1 348 aa13.06□□□□□ -0.32
SCN8A-209ENST00000627620 FAM98BQ52LJ0 330 aaKnown RBP13.06□□□□□ -0.32
SCN8A-209ENST00000627620 C1orf186Q6ZWK4 172 aa13.06□□□□□ -0.32
SCN8A-209ENST00000627620 SPPL2AQ8TCT8 520 aa13.06□□□□□ -0.32
SCN8A-209ENST00000627620 OXNAD1Q96HP4 312 aaPredicted RBP13.06□□□□□ -0.32
SCN8A-209ENST00000627620 TMEM134Q9H6X4 195 aa13.06□□□□□ -0.32
SCN8A-209ENST00000627620 RNF19AQ9NV58 838 aa13.06□□□□□ -0.32
SCN8A-209ENST00000627620 DDX20Q9UHI6 824 aaKnown RBP13.06□□□□□ -0.32
SCN8A-209ENST00000627620 ZMYM5Q9UJ78 669 aa13.06□□□□□ -0.32
SCN8A-209ENST00000627620 ZMYM2Q9UBW7 1377 aa13.06□□□□□ -0.32
SCN8A-209ENST00000627620 FCHO1O14526 889 aa13.06□□□□□ -0.32
SCN8A-209ENST00000627620 USP12O75317 370 aa13.06□□□□□ -0.32
SCN8A-209ENST00000627620 CYP2A6P11509 494 aaPredicted RBP13.06□□□□□ -0.32
SCN8A-209ENST00000627620 PTPRAP18433 802 aa13.06□□□□□ -0.32
SCN8A-209ENST00000627620 ZNF844Q08AG5 666 aa13.06□□□□□ -0.32
SCN8A-209ENST00000627620 PPM1LQ5SGD2 360 aa13.06□□□□□ -0.32
SCN8A-209ENST00000627620 TMPRSS6Q8IU80 811 aa13.06□□□□□ -0.32
SCN8A-209ENST00000627620 KATNAL2Q8IYT4 538 aa13.06□□□□□ -0.32
SCN8A-209ENST00000627620 NSMCE2Q96MF7 247 aa13.06□□□□□ -0.32
SCN8A-209ENST00000627620 C10orf88Q9H8K7 445 aa13.06□□□□□ -0.32
SCN8A-209ENST00000627620 CHST7Q9NS84 486 aa13.06□□□□□ -0.32
SCN8A-209ENST00000627620 ABCC13Q9NSE7 274 aa13.06□□□□□ -0.32
SCN8A-209ENST00000627620 SPG21Q9NZD8 308 aa13.06□□□□□ -0.32
SCN8A-209ENST00000627620 IL1RAPL1Q9NZN1 696 aa13.06□□□□□ -0.32
SCN8A-209ENST00000627620 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.06□□□□□ -0.32
SCN8A-209ENST00000627620 PXDNQ92626 1479 aa13.05□□□□□ -0.32
SCN8A-209ENST00000627620 FAM47E-STBD1D6RA91 191 aa13.05□□□□□ -0.32
SCN8A-209ENST00000627620 E7ENQ6 273 aa13.05□□□□□ -0.32
SCN8A-209ENST00000627620 ZBTB22O15209 634 aa13.05□□□□□ -0.32
SCN8A-209ENST00000627620 CYP1A1P04798 512 aaPredicted RBP13.05□□□□□ -0.32
SCN8A-209ENST00000627620 HSMCR30P0CW71 290 aa13.05□□□□□ -0.32
SCN8A-209ENST00000627620 IFI35P80217 286 aaPredicted RBP13.05□□□□□ -0.32
SCN8A-209ENST00000627620 TBX2Q13207 712 aaPredicted RBP13.05□□□□□ -0.32
SCN8A-209ENST00000627620 FKBP1CQ5VVH2 108 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms