RNA–Protein interactions for RNA: ENST00000626028.1

SF1-220, Transcript of splicing factor 1, humanhuman

TSL 2 BASIC

Gene SF1, Length 704 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-220ENST00000626028 XPO7Q9UIA9 1087 aaKnown RBP23.11■■□□□ 1.29
SF1-220ENST00000626028 TMEM59LQ9UK28 342 aa23.11■■□□□ 1.29
SF1-220ENST00000626028 A0A1B0GVM2 712 aa23.1■■□□□ 1.29
SF1-220ENST00000626028 TCAF2A6NFQ2 919 aa23.1■■□□□ 1.29
SF1-220ENST00000626028 AP5Z1O43299 807 aa23.1■■□□□ 1.29
SF1-220ENST00000626028 UNGP13051 313 aaPredicted RBP23.1■■□□□ 1.29
SF1-220ENST00000626028 FERP16591 822 aa23.1■■□□□ 1.29
SF1-220ENST00000626028 CD70P32970 193 aa23.1■■□□□ 1.29
SF1-220ENST00000626028 HOXD12P35452 270 aa23.1■■□□□ 1.29
SF1-220ENST00000626028 TPM4P67936 248 aa23.1■■□□□ 1.29
SF1-220ENST00000626028 CENPCQ03188 943 aa23.1■■□□□ 1.29
SF1-220ENST00000626028 PUM1Q14671 1186 aaKnown RBP eCLIP23.1■■□□□ 1.29
SF1-220ENST00000626028 ARID5BQ14865 1188 aa23.1■■□□□ 1.29
SF1-220ENST00000626028 WFDC5Q8TCV5 224 aa23.1■■□□□ 1.29
SF1-220ENST00000626028 RLN3Q8WXF3 142 aa23.1■■□□□ 1.29
SF1-220ENST00000626028 PRDM16Q9HAZ2 1276 aa23.1■■□□□ 1.29
SF1-220ENST00000626028 ARHGEF38Q9NXL2 777 aa23.1■■□□□ 1.29
SF1-220ENST00000626028 INVSQ9Y283 1065 aa23.1■■□□□ 1.29
SF1-220ENST00000626028 RAD54BQ9Y620 910 aa23.1■■□□□ 1.29
SF1-220ENST00000626028 SYCE3A1L190 88 aa23.09■■□□□ 1.29
SF1-220ENST00000626028 H0Y626 953 aa23.09■■□□□ 1.29
SF1-220ENST00000626028 EPHX1P07099 455 aa23.09■■□□□ 1.29
SF1-220ENST00000626028 BCKDHBP21953 392 aa23.09■■□□□ 1.29
SF1-220ENST00000626028 NSFP46459 744 aaKnown RBP23.09■■□□□ 1.29
SF1-220ENST00000626028 PLK1P53350 603 aa23.09■■□□□ 1.29
SF1-220ENST00000626028 RNASE9P60153 205 aaKnown RBP23.09■■□□□ 1.29
SF1-220ENST00000626028 LMAN2Q12907 356 aa23.09■■□□□ 1.29
SF1-220ENST00000626028 PTPRNQ16849 979 aa23.09■■□□□ 1.29
SF1-220ENST00000626028 C5orf22Q49AR2 442 aa23.09■■□□□ 1.29
SF1-220ENST00000626028 FNDC3BQ53EP0 1204 aaKnown RBP23.09■■□□□ 1.29
SF1-220ENST00000626028 PPP1R2P3Q6NXS1 205 aa23.09■■□□□ 1.29
SF1-220ENST00000626028 BNIPLQ7Z465 357 aa23.09■■□□□ 1.29
SF1-220ENST00000626028 PHF13Q86YI8 300 aaPredicted RBP23.09■■□□□ 1.29
SF1-220ENST00000626028 CARNMT1Q8N4J0 409 aa23.09■■□□□ 1.29
SF1-220ENST00000626028 NETO1Q8TDF5 533 aa23.09■■□□□ 1.29
SF1-220ENST00000626028 SORCS1Q8WY21 1168 aa23.09■■□□□ 1.29
SF1-220ENST00000626028 C1orf74Q96LT6 269 aa23.09■■□□□ 1.29
SF1-220ENST00000626028 PIGVQ9NUD9 493 aa23.09■■□□□ 1.29
SF1-220ENST00000626028 SUN2Q9UH99 717 aa23.09■■□□□ 1.29
SF1-220ENST00000626028 CACNA1AO00555 2505 aa23.09■■□□□ 1.29
SF1-220ENST00000626028 SYNJ2BP-COX16A0A087WUM0 186 aa23.08■■□□□ 1.29
SF1-220ENST00000626028 A0A1B0GTH6 734 aa23.08■■□□□ 1.29
SF1-220ENST00000626028 IGLV3-19P01714 112 aa23.08■■□□□ 1.29
SF1-220ENST00000626028 SRPRAP08240 638 aaKnown RBP23.08■■□□□ 1.29
SF1-220ENST00000626028 PRKCHP24723 683 aa23.08■■□□□ 1.29
SF1-220ENST00000626028 SULT1E1P49888 294 aa23.08■■□□□ 1.29
SF1-220ENST00000626028 CREB5Q02930 508 aa23.08■■□□□ 1.29
SF1-220ENST00000626028 DEUP1Q05D60 604 aa23.08■■□□□ 1.29
SF1-220ENST00000626028 AUHQ13825 339 aaKnown RBP23.08■■□□□ 1.29
SF1-220ENST00000626028 OTUD1Q5VV17 481 aaPredicted RBP23.08■■□□□ 1.29
SF1-220ENST00000626028 ERMP1Q7Z2K6 904 aa23.08■■□□□ 1.29
SF1-220ENST00000626028 CFAP52Q8N1V2 620 aa23.08■■□□□ 1.29
SF1-220ENST00000626028 C12orf50Q8NA57 414 aaPredicted RBP23.08■■□□□ 1.29
SF1-220ENST00000626028 RMDN1Q96DB5 314 aa23.08■■□□□ 1.29
SF1-220ENST00000626028 MYEOVQ96EZ4 313 aa23.08■■□□□ 1.29
SF1-220ENST00000626028 EDEM3Q9BZQ6 932 aa23.08■■□□□ 1.29
SF1-220ENST00000626028 ITM2CQ9NQX7 267 aa23.08■■□□□ 1.29
SF1-220ENST00000626028 COX16Q9P0S2 106 aa23.08■■□□□ 1.29
SF1-220ENST00000626028 USP36Q9P275 1121 aaKnown RBP23.08■■□□□ 1.29
SF1-220ENST00000626028 MBD1Q9UIS9 605 aaPredicted RBP23.08■■□□□ 1.29
SF1-220ENST00000626028 CDV3Q9UKY7 258 aaKnown RBP23.08■■□□□ 1.29
SF1-220ENST00000626028 IGHV1OR15-9A0A0B4J2B8 117 aa23.07■■□□□ 1.28
SF1-220ENST00000626028 TEX33O43247 280 aa23.07■■□□□ 1.28
SF1-220ENST00000626028 PAGE1O75459 146 aa23.07■■□□□ 1.28
SF1-220ENST00000626028 ENDOD1O94919 500 aa23.07■■□□□ 1.28
SF1-220ENST00000626028 CALB1P05937 261 aa23.07■■□□□ 1.28
SF1-220ENST00000626028 FLT3P36888 993 aa23.07■■□□□ 1.28
SF1-220ENST00000626028 LIMK1P53667 647 aa23.07■■□□□ 1.28
SF1-220ENST00000626028 ST8SIA6P61647 398 aa23.07■■□□□ 1.28
SF1-220ENST00000626028 FOXK2Q01167 660 aa23.07■■□□□ 1.28
SF1-220ENST00000626028 ZBTB16Q05516 673 aa23.07■■□□□ 1.28
SF1-220ENST00000626028 SULT2A1Q06520 285 aa23.07■■□□□ 1.28
SF1-220ENST00000626028 CLEC16AQ2KHT3 1053 aa23.07■■□□□ 1.28
SF1-220ENST00000626028 FBXL22Q6P050 247 aa23.07■■□□□ 1.28
SF1-220ENST00000626028 MMS22LQ6ZRQ5 1243 aa23.07■■□□□ 1.28
SF1-220ENST00000626028 CYP2U1Q7Z449 544 aa23.07■■□□□ 1.28
SF1-220ENST00000626028 TMPRSS6Q8IU80 811 aa23.07■■□□□ 1.28
SF1-220ENST00000626028 CCAR2Q8N163 923 aaKnown RBP23.07■■□□□ 1.28
SF1-220ENST00000626028 OR2T3Q8NH03 318 aa23.07■■□□□ 1.28
SF1-220ENST00000626028 PRCCQ92733 491 aaPredicted RBP23.07■■□□□ 1.28
SF1-220ENST00000626028 MKRN2Q9H000 416 aaKnown RBP23.07■■□□□ 1.28
SF1-220ENST00000626028 TKTL2Q9H0I9 626 aa23.07■■□□□ 1.28
SF1-220ENST00000626028 GOLGA8SH3BPF8 625 aa23.06■■□□□ 1.28
SF1-220ENST00000626028 CLDN11O75508 207 aa23.06■■□□□ 1.28
SF1-220ENST00000626028 OXTRP30559 389 aa23.06■■□□□ 1.28
SF1-220ENST00000626028 RDXP35241 583 aaKnown RBP23.06■■□□□ 1.28
SF1-220ENST00000626028 CSKP41240 450 aa23.06■■□□□ 1.28
SF1-220ENST00000626028 VASPP50552 380 aaPredicted RBP23.06■■□□□ 1.28
SF1-220ENST00000626028 RSPO4Q2I0M5 234 aaPredicted RBP23.06■■□□□ 1.28
SF1-220ENST00000626028 FSCBQ5H9T9 825 aa23.06■■□□□ 1.28
SF1-220ENST00000626028 PITRM1Q5JRX3 1037 aa23.06■■□□□ 1.28
SF1-220ENST00000626028 RABEPKQ7Z6M1 372 aa23.06■■□□□ 1.28
SF1-220ENST00000626028 SYT12Q8IV01 421 aa23.06■■□□□ 1.28
SF1-220ENST00000626028 CYB5D2Q8WUJ1 264 aa23.06■■□□□ 1.28
SF1-220ENST00000626028 SIPA1Q96FS4 1042 aa23.06■■□□□ 1.28
SF1-220ENST00000626028 RPRD1AQ96P16 312 aaPredicted RBP23.06■■□□□ 1.28
SF1-220ENST00000626028 HAPLN3Q96S86 360 aa23.06■■□□□ 1.28
SF1-220ENST00000626028 TBCBQ99426 244 aa23.06■■□□□ 1.28
SF1-220ENST00000626028 AGPAT1Q99943 283 aa23.06■■□□□ 1.28
SF1-220ENST00000626028 RTKNQ9BST9 563 aa23.06■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms