RNA–Protein interactions for RNA: ENST00000625293.1

TREX1-205, Transcript of three prime repair exonuclease 1, humanhuman

BASIC

Gene TREX1, Length 1,783 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-205ENST00000625293 CCNYQ8ND76 341 aa20.21■□□□□ 0.83
TREX1-205ENST00000625293 SLC44A1Q8WWI5 657 aa20.21■□□□□ 0.83
TREX1-205ENST00000625293 HDAC11Q96DB2 347 aa20.21■□□□□ 0.83
TREX1-205ENST00000625293 FERMT1Q9BQL6 677 aa20.21■□□□□ 0.83
TREX1-205ENST00000625293 TMEM175Q9BSA9 504 aa20.21■□□□□ 0.83
TREX1-205ENST00000625293 UBE2OQ9C0C9 1292 aaKnown RBP20.21■□□□□ 0.83
TREX1-205ENST00000625293 FAM107BQ9H098 131 aa20.21■□□□□ 0.83
TREX1-205ENST00000625293 GGA2Q9UJY4 613 aa20.21■□□□□ 0.83
TREX1-205ENST00000625293 ZNF638Q14966 1978 aaKnown RBP20.21■□□□□ 0.83
TREX1-205ENST00000625293 FAM92AA1XBS5 289 aa20.21■□□□□ 0.83
TREX1-205ENST00000625293 ALDH2P05091 517 aa20.21■□□□□ 0.83
TREX1-205ENST00000625293 ACRP10323 421 aa20.21■□□□□ 0.83
TREX1-205ENST00000625293 PTPN3P26045 913 aa20.21■□□□□ 0.83
TREX1-205ENST00000625293 EPHB2P29323 1055 aa20.21■□□□□ 0.83
TREX1-205ENST00000625293 LRRC14Q15048 493 aa20.21■□□□□ 0.83
TREX1-205ENST00000625293 SDHAF4Q5VUM1 108 aa20.21■□□□□ 0.83
TREX1-205ENST00000625293 MSANTD2Q6P1R3 559 aa20.21■□□□□ 0.83
TREX1-205ENST00000625293 ANKRD42Q8N9B4 389 aa20.21■□□□□ 0.83
TREX1-205ENST00000625293 DENND1AQ8TEH3 1009 aa20.21■□□□□ 0.83
TREX1-205ENST00000625293 CKAP2Q8WWK9 683 aa20.21■□□□□ 0.83
TREX1-205ENST00000625293 KIF9Q9HAQ2 790 aa20.21■□□□□ 0.83
TREX1-205ENST00000625293 SSU72Q9NP77 194 aaKnown RBP20.21■□□□□ 0.83
TREX1-205ENST00000625293 ZC3H7BQ9UGR2 993 aaKnown RBP20.21■□□□□ 0.83
TREX1-205ENST00000625293 LRFN2Q9ULH4 789 aa20.21■□□□□ 0.83
TREX1-205ENST00000625293 FAM47DPA6NHR8 397 aa20.2■□□□□ 0.82
TREX1-205ENST00000625293 PIAS1O75925 651 aa20.2■□□□□ 0.82
TREX1-205ENST00000625293 GALTP07902 379 aa20.2■□□□□ 0.82
TREX1-205ENST00000625293 KRT15P19012 456 aa20.2■□□□□ 0.82
TREX1-205ENST00000625293 MX2P20592 715 aa20.2■□□□□ 0.82
TREX1-205ENST00000625293 PRKCHP24723 683 aa20.2■□□□□ 0.82
TREX1-205ENST00000625293 STX2P32856 288 aa20.2■□□□□ 0.82
TREX1-205ENST00000625293 SERPINB6P35237 376 aa20.2■□□□□ 0.82
TREX1-205ENST00000625293 MSH2P43246 934 aa20.2■□□□□ 0.82
TREX1-205ENST00000625293 IFNAR2P48551 515 aa20.2■□□□□ 0.82
TREX1-205ENST00000625293 PPP2R5DQ14738 602 aa20.2■□□□□ 0.82
TREX1-205ENST00000625293 KBTBD12Q3ZCT8 623 aa20.2■□□□□ 0.82
TREX1-205ENST00000625293 C9orf50Q5SZB4 431 aa20.2■□□□□ 0.82
TREX1-205ENST00000625293 FUT10Q6P4F1 479 aa20.2■□□□□ 0.82
TREX1-205ENST00000625293 C16orf59Q7L2K0 433 aa20.2■□□□□ 0.82
TREX1-205ENST00000625293 MON1AQ86VX9 555 aa20.2■□□□□ 0.82
TREX1-205ENST00000625293 LRRC34Q8IZ02 419 aa20.2■□□□□ 0.82
TREX1-205ENST00000625293 MGARPQ8TDB4 240 aa20.2■□□□□ 0.82
TREX1-205ENST00000625293 RNF34Q969K3 372 aa20.2■□□□□ 0.82
TREX1-205ENST00000625293 VWCEQ96DN2 955 aa20.2■□□□□ 0.82
TREX1-205ENST00000625293 MRRFQ96E11 262 aaKnown RBP20.2■□□□□ 0.82
TREX1-205ENST00000625293 CFAP36Q96G28 342 aa20.2■□□□□ 0.82
TREX1-205ENST00000625293 B3GALT6Q96L58 329 aa20.2■□□□□ 0.82
TREX1-205ENST00000625293 EBNA1BP2Q99848 306 aaKnown RBP20.2■□□□□ 0.82
TREX1-205ENST00000625293 MRPL9Q9BYD2 267 aaKnown RBP20.2■□□□□ 0.82
TREX1-205ENST00000625293 SFMBT1Q9UHJ3 866 aa20.2■□□□□ 0.82
TREX1-205ENST00000625293 PLXNA3P51805 1871 aa20.2■□□□□ 0.82
TREX1-205ENST00000625293 TANC1Q9C0D5 1861 aa20.2■□□□□ 0.82
TREX1-205ENST00000625293 TTC3P53804 2025 aa20.19■□□□□ 0.82
TREX1-205ENST00000625293 A0A1W2PPM1 405 aa20.19■□□□□ 0.82
TREX1-205ENST00000625293 KCNU1A8MYU2 1149 aa20.19■□□□□ 0.82
TREX1-205ENST00000625293 TRDMT1O14717 391 aaKnown RBP20.19■□□□□ 0.82
TREX1-205ENST00000625293 MSI1O43347 362 aaKnown RBP20.19■□□□□ 0.82
TREX1-205ENST00000625293 TYROBPO43914 113 aa20.19■□□□□ 0.82
TREX1-205ENST00000625293 VNN2O95498 520 aa20.19■□□□□ 0.82
TREX1-205ENST00000625293 PSMB4P28070 264 aa20.19■□□□□ 0.82
TREX1-205ENST00000625293 CCR1P32246 355 aa20.19■□□□□ 0.82
TREX1-205ENST00000625293 HTR7P34969 479 aa20.19■□□□□ 0.82
TREX1-205ENST00000625293 USP46P62068 366 aa20.19■□□□□ 0.82
TREX1-205ENST00000625293 LRRC8BQ6P9F7 803 aa20.19■□□□□ 0.82
TREX1-205ENST00000625293 PRPF39Q86UA1 669 aaKnown RBP20.19■□□□□ 0.82
TREX1-205ENST00000625293 CEP57Q86XR8 500 aa20.19■□□□□ 0.82
TREX1-205ENST00000625293 SPATS2Q86XZ4 545 aaKnown RBP20.19■□□□□ 0.82
TREX1-205ENST00000625293 MPP5Q8N3R9 675 aa20.19■□□□□ 0.82
TREX1-205ENST00000625293 TTC9BQ8N6N2 239 aa20.19■□□□□ 0.82
TREX1-205ENST00000625293 ATAD1Q8NBU5 361 aa20.19■□□□□ 0.82
TREX1-205ENST00000625293 STKLD1Q8NE28 680 aa20.19■□□□□ 0.82
TREX1-205ENST00000625293 SGSM3Q96HU1 749 aa20.19■□□□□ 0.82
TREX1-205ENST00000625293 PGLYRP2Q96PD5 576 aa20.19■□□□□ 0.82
TREX1-205ENST00000625293 GORASP1Q9BQQ3 440 aa20.19■□□□□ 0.82
TREX1-205ENST00000625293 CEP41Q9BYV8 373 aa20.19■□□□□ 0.82
TREX1-205ENST00000625293 FBXO44Q9H4M3 255 aa20.19■□□□□ 0.82
TREX1-205ENST00000625293 SMG5Q9UPR3 1016 aaKnown RBP20.19■□□□□ 0.82
TREX1-205ENST00000625293 KCNK1O00180 336 aa20.18■□□□□ 0.82
TREX1-205ENST00000625293 PAGE1O75459 146 aa20.18■□□□□ 0.82
TREX1-205ENST00000625293 GARSP41250 739 aaKnown RBP20.18■□□□□ 0.82
TREX1-205ENST00000625293 WDR4P57081 412 aaKnown RBP20.18■□□□□ 0.82
TREX1-205ENST00000625293 SARNPP82979 210 aaKnown RBP20.18■□□□□ 0.82
TREX1-205ENST00000625293 RSPO2Q6UXX9 243 aaPredicted RBP20.18■□□□□ 0.82
TREX1-205ENST00000625293 UNC5AQ6ZN44 842 aa20.18■□□□□ 0.82
TREX1-205ENST00000625293 PDCD7Q8N8D1 485 aaKnown RBP20.18■□□□□ 0.82
TREX1-205ENST00000625293 SMC6Q96SB8 1091 aa20.18■□□□□ 0.82
TREX1-205ENST00000625293 TMEM51Q9NW97 253 aa20.18■□□□□ 0.82
TREX1-205ENST00000625293 NKIRAS1Q9NYS0 192 aa20.18■□□□□ 0.82
TREX1-205ENST00000625293 SEPT10Q9P0V9 454 aa20.18■□□□□ 0.82
TREX1-205ENST00000625293 TET1Q8NFU7 2136 aa20.18■□□□□ 0.82
TREX1-205ENST00000625293 MTMR11A4FU01 709 aa20.18■□□□□ 0.82
TREX1-205ENST00000625293 MTSS1O43312 755 aa20.18■□□□□ 0.82
TREX1-205ENST00000625293 CPP00450 1065 aa20.18■□□□□ 0.82
TREX1-205ENST00000625293 APOEP02649 317 aa20.18■□□□□ 0.82
TREX1-205ENST00000625293 NRG1Q02297 640 aaPredicted RBP20.18■□□□□ 0.82
TREX1-205ENST00000625293 ELAVL2Q12926 359 aaKnown RBP20.18■□□□□ 0.82
TREX1-205ENST00000625293 GPR17Q13304 367 aa20.18■□□□□ 0.82
TREX1-205ENST00000625293 SHHQ15465 462 aa20.18■□□□□ 0.82
TREX1-205ENST00000625293 RTP2Q5QGT7 225 aa20.18■□□□□ 0.82
TREX1-205ENST00000625293 STEAP4Q687X5 459 aa20.18■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms