RNA–Protein interactions for RNA: ENST00000623253.4_PAR_Y

CD99-211, Transcript of CD99 molecule (Xg blood group), humanhuman

TSL 1 (best)

Gene CD99, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD99-211ENST00000623253_PAR_Y ELF4Q99607 663 aaPredicted RBP16.81■□□□□ 0.28
CD99-211ENST00000623253_PAR_Y NEUROG2Q9H2A3 272 aa16.81■□□□□ 0.28
CD99-211ENST00000623253_PAR_Y SERGEFQ9UGK8 458 aa16.81■□□□□ 0.28
CD99-211ENST00000623253_PAR_Y KIAA1257Q9ULG3 409 aa16.81■□□□□ 0.28
CD99-211ENST00000623253_PAR_Y SCML1Q9UN30 329 aa16.81■□□□□ 0.28
CD99-211ENST00000623253_PAR_Y CEP83Q9Y592 693 aa16.81■□□□□ 0.28
CD99-211ENST00000623253_PAR_Y NUMA1Q14980 2115 aa16.81■□□□□ 0.28
CD99-211ENST00000623253_PAR_Y LRRC72A6NJI9 287 aa16.8■□□□□ 0.28
CD99-211ENST00000623253_PAR_Y CBX4O00257 560 aa16.8■□□□□ 0.28
CD99-211ENST00000623253_PAR_Y MID1O15344 667 aa16.8■□□□□ 0.28
CD99-211ENST00000623253_PAR_Y LDOC1O95751 146 aaPredicted RBP16.8■□□□□ 0.28
CD99-211ENST00000623253_PAR_Y C7P10643 843 aa16.8■□□□□ 0.28
CD99-211ENST00000623253_PAR_Y CLDN6P56747 220 aa16.8■□□□□ 0.28
CD99-211ENST00000623253_PAR_Y RPS24P62847 133 aaKnown RBP16.8■□□□□ 0.28
CD99-211ENST00000623253_PAR_Y CDH18Q13634 790 aa16.8■□□□□ 0.28
CD99-211ENST00000623253_PAR_Y CST6Q15828 149 aa16.8■□□□□ 0.28
CD99-211ENST00000623253_PAR_Y HNRNPA1L2Q32P51 320 aaKnown RBP16.8■□□□□ 0.28
CD99-211ENST00000623253_PAR_Y PMF1Q6P1K2 205 aa16.8■□□□□ 0.28
CD99-211ENST00000623253_PAR_Y MSANTD2Q6P1R3 559 aa16.8■□□□□ 0.28
CD99-211ENST00000623253_PAR_Y TMEM270Q6UE05 265 aa16.8■□□□□ 0.28
CD99-211ENST00000623253_PAR_Y TMPRSS12Q86WS5 348 aa16.8■□□□□ 0.28
CD99-211ENST00000623253_PAR_Y SCUBE3Q8IX30 993 aa16.8■□□□□ 0.28
CD99-211ENST00000623253_PAR_Y FIBINQ8TAL6 211 aa16.8■□□□□ 0.28
CD99-211ENST00000623253_PAR_Y TTC17Q96AE7 1141 aa16.8■□□□□ 0.28
CD99-211ENST00000623253_PAR_Y CNDP2Q96KP4 475 aaKnown RBP16.8■□□□□ 0.28
CD99-211ENST00000623253_PAR_Y TSG101Q99816 390 aa16.8■□□□□ 0.28
CD99-211ENST00000623253_PAR_Y DDX50Q9BQ39 737 aaKnown RBP16.8■□□□□ 0.28
CD99-211ENST00000623253_PAR_Y MIS12Q9H081 205 aa16.8■□□□□ 0.28
CD99-211ENST00000623253_PAR_Y TMEM131Q92545 1883 aa16.8■□□□□ 0.28
CD99-211ENST00000623253_PAR_Y A0A087WV48 116 aa16.79■□□□□ 0.28
CD99-211ENST00000623253_PAR_Y TTC34A8MYJ7 566 aa16.79■□□□□ 0.28
CD99-211ENST00000623253_PAR_Y M0QYV0 167 aa16.79■□□□□ 0.28
CD99-211ENST00000623253_PAR_Y ENC1O14682 589 aa16.79■□□□□ 0.28
CD99-211ENST00000623253_PAR_Y ZNF202O95125 648 aa16.79■□□□□ 0.28
CD99-211ENST00000623253_PAR_Y IGLV3-27P01718 113 aa16.79■□□□□ 0.28
CD99-211ENST00000623253_PAR_Y LTFP02788 710 aa16.79■□□□□ 0.28
CD99-211ENST00000623253_PAR_Y ASLP04424 464 aa16.79■□□□□ 0.28
CD99-211ENST00000623253_PAR_Y SLC8A1P32418 973 aa16.79■□□□□ 0.28
CD99-211ENST00000623253_PAR_Y HNF1BP35680 557 aa16.79■□□□□ 0.28
CD99-211ENST00000623253_PAR_Y DNAJC3Q13217 504 aa16.79■□□□□ 0.28
CD99-211ENST00000623253_PAR_Y NADSYN1Q6IA69 706 aa16.79■□□□□ 0.28
CD99-211ENST00000623253_PAR_Y LCLAT1Q6UWP7 414 aa16.79■□□□□ 0.28
CD99-211ENST00000623253_PAR_Y MMS22LQ6ZRQ5 1243 aa16.79■□□□□ 0.28
CD99-211ENST00000623253_PAR_Y CFAP52Q8N1V2 620 aa16.79■□□□□ 0.28
CD99-211ENST00000623253_PAR_Y SCML4Q8N228 414 aa16.79■□□□□ 0.28
CD99-211ENST00000623253_PAR_Y EID2Q8N6I1 236 aa16.79■□□□□ 0.28
CD99-211ENST00000623253_PAR_Y PIP4K2CQ8TBX8 421 aa16.79■□□□□ 0.28
CD99-211ENST00000623253_PAR_Y CLEC4CQ8WTT0 213 aa16.79■□□□□ 0.28
CD99-211ENST00000623253_PAR_Y IRGQQ8WZA9 623 aa16.79■□□□□ 0.28
CD99-211ENST00000623253_PAR_Y TFAP2BQ92481 460 aa16.79■□□□□ 0.28
CD99-211ENST00000623253_PAR_Y MYO19Q96H55 970 aa16.79■□□□□ 0.28
CD99-211ENST00000623253_PAR_Y PRICKLE1Q96MT3 831 aaPredicted RBP16.79■□□□□ 0.28
CD99-211ENST00000623253_PAR_Y IRX2Q9BZI1 471 aaPredicted RBP16.79■□□□□ 0.28
CD99-211ENST00000623253_PAR_Y GOLPH3LQ9H4A5 285 aa16.79■□□□□ 0.28
CD99-211ENST00000623253_PAR_Y EBF2Q9HAK2 575 aa16.79■□□□□ 0.28
CD99-211ENST00000623253_PAR_Y INTS6Q9UL03 887 aaKnown RBP16.79■□□□□ 0.28
CD99-211ENST00000623253_PAR_Y ERVW-1Q9UQF0 538 aa16.79■□□□□ 0.28
CD99-211ENST00000623253_PAR_Y COQ4Q9Y3A0 265 aa16.79■□□□□ 0.28
CD99-211ENST00000623253_PAR_Y PCDHB4Q9Y5E5 795 aa16.79■□□□□ 0.28
CD99-211ENST00000623253_PAR_Y MUC22E2RYF6 1773 aaPredicted RBP16.79■□□□□ 0.28
CD99-211ENST00000623253_PAR_Y GABBR2O75899 941 aa16.78■□□□□ 0.28
CD99-211ENST00000623253_PAR_Y MOCS2O96007 188 aaPredicted RBP16.78■□□□□ 0.28
CD99-211ENST00000623253_PAR_Y WNT1P04628 370 aa16.78■□□□□ 0.28
CD99-211ENST00000623253_PAR_Y TBXAS1P24557 533 aaPredicted RBP16.78■□□□□ 0.28
CD99-211ENST00000623253_PAR_Y CD38P28907 300 aa16.78■□□□□ 0.28
CD99-211ENST00000623253_PAR_Y CTSOP43234 321 aaPredicted RBP16.78■□□□□ 0.28
CD99-211ENST00000623253_PAR_Y ABCG1P45844 678 aa16.78■□□□□ 0.28
CD99-211ENST00000623253_PAR_Y PSMD8P48556 350 aa16.78■□□□□ 0.28
CD99-211ENST00000623253_PAR_Y SEMG2Q02383 582 aa16.78■□□□□ 0.28
CD99-211ENST00000623253_PAR_Y PKDCCQ504Y2 493 aa16.78■□□□□ 0.28
CD99-211ENST00000623253_PAR_Y FSCBQ5H9T9 825 aa16.78■□□□□ 0.28
CD99-211ENST00000623253_PAR_Y C6orf118Q5T5N4 469 aa16.78■□□□□ 0.28
CD99-211ENST00000623253_PAR_Y C9orf64Q5T6V5 341 aa16.78■□□□□ 0.28
CD99-211ENST00000623253_PAR_Y RNF219Q5W0B1 726 aaPredicted RBP16.78■□□□□ 0.28
CD99-211ENST00000623253_PAR_Y OR2T34Q8NGX1 318 aa16.78■□□□□ 0.28
CD99-211ENST00000623253_PAR_Y SLC35F5Q8WV83 523 aa16.78■□□□□ 0.28
CD99-211ENST00000623253_PAR_Y AZIN2Q96A70 460 aa16.78■□□□□ 0.28
CD99-211ENST00000623253_PAR_Y MYEOVQ96EZ4 313 aa16.78■□□□□ 0.28
CD99-211ENST00000623253_PAR_Y CCDC34Q96HJ3 373 aa16.78■□□□□ 0.28
CD99-211ENST00000623253_PAR_Y LMLNQ96KR4 655 aa16.78■□□□□ 0.28
CD99-211ENST00000623253_PAR_Y MRGPRX3Q96LB0 322 aa16.78■□□□□ 0.28
CD99-211ENST00000623253_PAR_Y GDF3Q9NR23 364 aa16.78■□□□□ 0.28
CD99-211ENST00000623253_PAR_Y ARMCX3Q9UH62 379 aaPredicted RBP16.78■□□□□ 0.28
CD99-211ENST00000623253_PAR_Y AK5Q9Y6K8 562 aa16.78■□□□□ 0.28
CD99-211ENST00000623253_PAR_Y APC2O95996 2303 aa16.78■□□□□ 0.28
CD99-211ENST00000623253_PAR_Y CELSR3Q9NYQ7 3312 aa16.77■□□□□ 0.28
CD99-211ENST00000623253_PAR_Y IGSF10Q6WRI0 2623 aa16.77■□□□□ 0.28
CD99-211ENST00000623253_PAR_Y E9PAM4 449 aa16.77■□□□□ 0.28
CD99-211ENST00000623253_PAR_Y WNT9AO14904 365 aa16.77■□□□□ 0.28
CD99-211ENST00000623253_PAR_Y SLC16A3O15427 465 aaKnown RBP16.77■□□□□ 0.28
CD99-211ENST00000623253_PAR_Y PAPSS1O43252 624 aaPredicted RBP16.77■□□□□ 0.28
CD99-211ENST00000623253_PAR_Y RFPL3O75679 317 aa16.77■□□□□ 0.28
CD99-211ENST00000623253_PAR_Y MOCS3O95396 460 aa16.77■□□□□ 0.28
CD99-211ENST00000623253_PAR_Y CALCAP01258 141 aa16.77■□□□□ 0.28
CD99-211ENST00000623253_PAR_Y PAEPP09466 180 aa16.77■□□□□ 0.28
CD99-211ENST00000623253_PAR_Y BRD2P25440 801 aaKnown RBP16.77■□□□□ 0.28
CD99-211ENST00000623253_PAR_Y PRCPP42785 496 aa16.77■□□□□ 0.28
CD99-211ENST00000623253_PAR_Y ARRB1P49407 418 aaPredicted RBP16.77■□□□□ 0.28
CD99-211ENST00000623253_PAR_Y NUMBP49757 651 aa16.77■□□□□ 0.28
CD99-211ENST00000623253_PAR_Y FKBP3Q00688 224 aaKnown RBP16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms