RNA–Protein interactions for RNA: ENST00000622138.4

TRIM49B-202, Transcript of tripartite motif containing 49B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM49B, Length 2,162 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49B-202ENST00000622138 KCNH7Q9NS40 1196 aa7.69□□□□□ -1.18
TRIM49B-202ENST00000622138 MRGBPQ9NV56 204 aa7.69□□□□□ -1.18
TRIM49B-202ENST00000622138 GDAP2Q9NXN4 497 aa7.69□□□□□ -1.18
TRIM49B-202ENST00000622138 SUCOQ9UBS9 1254 aaKnown RBP7.69□□□□□ -1.18
TRIM49B-202ENST00000622138 RNF11Q9Y3C5 154 aa7.69□□□□□ -1.18
TRIM49B-202ENST00000622138 COL2A1P02458 1487 aaPredicted RBP7.69□□□□□ -1.18
TRIM49B-202ENST00000622138 CNTNAP1P78357 1384 aa7.69□□□□□ -1.18
TRIM49B-202ENST00000622138 FAM237BA0A1B0GVD1 139 aa7.69□□□□□ -1.18
TRIM49B-202ENST00000622138 A0A1W2PPM1 405 aa7.69□□□□□ -1.18
TRIM49B-202ENST00000622138 WDR91A4D1P6 747 aa7.69□□□□□ -1.18
TRIM49B-202ENST00000622138 PRR5-ARHGAP8B1AHC4 643 aa7.69□□□□□ -1.18
TRIM49B-202ENST00000622138 RPL17P18621 184 aaKnown RBP7.69□□□□□ -1.18
TRIM49B-202ENST00000622138 RRM1P23921 792 aa7.69□□□□□ -1.18
TRIM49B-202ENST00000622138 PKLRP30613 574 aa7.69□□□□□ -1.18
TRIM49B-202ENST00000622138 BMPR1AP36894 532 aa7.69□□□□□ -1.18
TRIM49B-202ENST00000622138 ADCY8P40145 1251 aa7.69□□□□□ -1.18
TRIM49B-202ENST00000622138 GPD2P43304 727 aa7.69□□□□□ -1.18
TRIM49B-202ENST00000622138 SOX10P56693 466 aa7.69□□□□□ -1.18
TRIM49B-202ENST00000622138 ARHGAP8P85298 464 aa7.69□□□□□ -1.18
TRIM49B-202ENST00000622138 FCHO2Q0JRZ9 810 aa7.69□□□□□ -1.18
TRIM49B-202ENST00000622138 PDK1Q15118 436 aa7.69□□□□□ -1.18
TRIM49B-202ENST00000622138 PCSK7Q16549 785 aa7.69□□□□□ -1.18
TRIM49B-202ENST00000622138 MDH1BQ5I0G3 518 aa7.69□□□□□ -1.18
TRIM49B-202ENST00000622138 PPM1LQ5SGD2 360 aa7.69□□□□□ -1.18
TRIM49B-202ENST00000622138 IZUMO3Q5VZ72 239 aa7.69□□□□□ -1.18
TRIM49B-202ENST00000622138 KRT80Q6KB66 452 aa7.69□□□□□ -1.18
TRIM49B-202ENST00000622138 CYP4F22Q6NT55 531 aa7.69□□□□□ -1.18
TRIM49B-202ENST00000622138 TMC5Q6UXY8 1006 aa7.69□□□□□ -1.18
TRIM49B-202ENST00000622138 PRR23CQ6ZRP0 262 aa7.69□□□□□ -1.18
TRIM49B-202ENST00000622138 LINC00299Q6ZSB3 139 aa7.69□□□□□ -1.18
TRIM49B-202ENST00000622138 AKAP14Q86UN6 197 aa7.69□□□□□ -1.18
TRIM49B-202ENST00000622138 TTC30BQ8N4P2 665 aa7.69□□□□□ -1.18
TRIM49B-202ENST00000622138 FIBCD1Q8N539 461 aa7.69□□□□□ -1.18
TRIM49B-202ENST00000622138 NATD1Q8N6N6 113 aa7.69□□□□□ -1.18
TRIM49B-202ENST00000622138 TAS1R2Q8TE23 839 aa7.69□□□□□ -1.18
TRIM49B-202ENST00000622138 AFG1LQ8WV93 481 aa7.69□□□□□ -1.18
TRIM49B-202ENST00000622138 KBTBD7Q8WVZ9 684 aa7.69□□□□□ -1.18
TRIM49B-202ENST00000622138 BSNDQ8WZ55 320 aa7.69□□□□□ -1.18
TRIM49B-202ENST00000622138 APOPT1Q96IL0 206 aa7.69□□□□□ -1.18
TRIM49B-202ENST00000622138 ZNF597Q96LX8 424 aa7.69□□□□□ -1.18
TRIM49B-202ENST00000622138 ZNF347Q96SE7 839 aa7.69□□□□□ -1.18
TRIM49B-202ENST00000622138 RIT2Q99578 217 aa7.69□□□□□ -1.18
TRIM49B-202ENST00000622138 FAM118BQ9BPY3 351 aa7.69□□□□□ -1.18
TRIM49B-202ENST00000622138 TRIM56Q9BRZ2 755 aaKnown RBP7.69□□□□□ -1.18
TRIM49B-202ENST00000622138 PI4K2AQ9BTU6 479 aa7.69□□□□□ -1.18
TRIM49B-202ENST00000622138 CLPBQ9H078 707 aa7.69□□□□□ -1.18
TRIM49B-202ENST00000622138 TP63Q9H3D4 680 aaPredicted RBP7.69□□□□□ -1.18
TRIM49B-202ENST00000622138 DDX56Q9NY93 547 aaKnown RBP7.69□□□□□ -1.18
TRIM49B-202ENST00000622138 STMN3Q9NZ72 180 aa7.69□□□□□ -1.18
TRIM49B-202ENST00000622138 AGO2Q9UKV8 859 aaKnown RBP7.69□□□□□ -1.18
TRIM49B-202ENST00000622138 SCAF8Q9UPN6 1271 aaKnown RBP7.69□□□□□ -1.18
TRIM49B-202ENST00000622138 MRPL11Q9Y3B7 192 aaKnown RBP7.69□□□□□ -1.18
TRIM49B-202ENST00000622138 CORINQ9Y5Q5 1042 aa7.69□□□□□ -1.18
TRIM49B-202ENST00000622138 TANC1Q9C0D5 1861 aa7.68□□□□□ -1.18
TRIM49B-202ENST00000622138 A0A1W2PPW3 197 aa7.68□□□□□ -1.18
TRIM49B-202ENST00000622138 ARHGEF37A1IGU5 675 aa7.68□□□□□ -1.18
TRIM49B-202ENST00000622138 FAM155AB1AL88 458 aaPredicted RBP7.68□□□□□ -1.18
TRIM49B-202ENST00000622138 HOXC11O43248 304 aaPredicted RBP7.68□□□□□ -1.18
TRIM49B-202ENST00000622138 ONECUT3O60422 494 aaPredicted RBP7.68□□□□□ -1.18
TRIM49B-202ENST00000622138 JRKO75564 520 aa7.68□□□□□ -1.18
TRIM49B-202ENST00000622138 SPAG6O75602 509 aa7.68□□□□□ -1.18
TRIM49B-202ENST00000622138 CLPXO76031 633 aa7.68□□□□□ -1.18
TRIM49B-202ENST00000622138 MCF2P10911 925 aa7.68□□□□□ -1.18
TRIM49B-202ENST00000622138 GZMAP12544 262 aa7.68□□□□□ -1.18
TRIM49B-202ENST00000622138 TGM1P22735 817 aa7.68□□□□□ -1.18
TRIM49B-202ENST00000622138 CCNCP24863 283 aa7.68□□□□□ -1.18
TRIM49B-202ENST00000622138 GABRB3P28472 473 aa7.68□□□□□ -1.18
TRIM49B-202ENST00000622138 POLR2BP30876 1174 aaKnown RBP7.68□□□□□ -1.18
TRIM49B-202ENST00000622138 NUDT1P36639 197 aa7.68□□□□□ -1.18
TRIM49B-202ENST00000622138 ETV4P43268 484 aa7.68□□□□□ -1.18
TRIM49B-202ENST00000622138 B2MP61769 119 aa7.68□□□□□ -1.18
TRIM49B-202ENST00000622138 PHC1P78364 1004 aa7.68□□□□□ -1.18
TRIM49B-202ENST00000622138 MRPS9P82933 396 aaKnown RBP7.68□□□□□ -1.18
TRIM49B-202ENST00000622138 SLC25A3Q00325 362 aa7.68□□□□□ -1.18
TRIM49B-202ENST00000622138 GTF2BQ00403 316 aa7.68□□□□□ -1.18
TRIM49B-202ENST00000622138 CTBSQ01459 385 aa7.68□□□□□ -1.18
TRIM49B-202ENST00000622138 PRKCQQ04759 706 aa7.68□□□□□ -1.18
TRIM49B-202ENST00000622138 GRSF1Q12849 480 aaKnown RBP eCLIP7.68□□□□□ -1.18
TRIM49B-202ENST00000622138 BNIP3Q12983 259 aa7.68□□□□□ -1.18
TRIM49B-202ENST00000622138 TRPC3Q13507 836 aa7.68□□□□□ -1.18
TRIM49B-202ENST00000622138 DGKZQ13574 1117 aa7.68□□□□□ -1.18
TRIM49B-202ENST00000622138 NPTX1Q15818 432 aa7.68□□□□□ -1.18
TRIM49B-202ENST00000622138 SNRNP35Q16560 246 aaKnown RBP7.68□□□□□ -1.18
TRIM49B-202ENST00000622138 TKFCQ3LXA3 575 aa7.68□□□□□ -1.18
TRIM49B-202ENST00000622138 CEP78Q5JTW2 689 aa7.68□□□□□ -1.18
TRIM49B-202ENST00000622138 ZNF618Q5T7W0 954 aa7.68□□□□□ -1.18
TRIM49B-202ENST00000622138 ATAD3BQ5T9A4 648 aa7.68□□□□□ -1.18
TRIM49B-202ENST00000622138 PPP1R2P3Q6NXS1 205 aa7.68□□□□□ -1.18
TRIM49B-202ENST00000622138 SLC39A4Q6P5W5 647 aa7.68□□□□□ -1.18
TRIM49B-202ENST00000622138 ADAMTSL2Q86TH1 951 aa7.68□□□□□ -1.18
TRIM49B-202ENST00000622138 LURAP1LQ8IV03 231 aa7.68□□□□□ -1.18
TRIM49B-202ENST00000622138 CCDC28AQ8IWP9 274 aa7.68□□□□□ -1.18
TRIM49B-202ENST00000622138 DCLK2Q8N568 766 aa7.68□□□□□ -1.18
TRIM49B-202ENST00000622138 CHAC2Q8WUX2 184 aa7.68□□□□□ -1.18
TRIM49B-202ENST00000622138 CLEC4DQ8WXI8 215 aa7.68□□□□□ -1.18
TRIM49B-202ENST00000622138 TANKQ92844 425 aa7.68□□□□□ -1.18
TRIM49B-202ENST00000622138 ZNF512Q96ME7 567 aaPredicted RBP7.68□□□□□ -1.18
TRIM49B-202ENST00000622138 TMEM206Q9H813 350 aa7.68□□□□□ -1.18
TRIM49B-202ENST00000622138 AGO4Q9HCK5 861 aaKnown RBP7.68□□□□□ -1.18
TRIM49B-202ENST00000622138 HMG20AQ9NP66 347 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms