RNA–Protein interactions for RNA: ENST00000621728.4

SEMA6C-210, Transcript of semaphorin 6C, humanhuman

TSL 1 (best) BASIC

Gene SEMA6C, Length 1,918 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6C-210ENST00000621728 DENND1CQ8IV53 801 aa19.17■□□□□ 0.66
SEMA6C-210ENST00000621728 ADAMTS19Q8TE59 1207 aa19.17■□□□□ 0.66
SEMA6C-210ENST00000621728 IGSF8Q969P0 613 aa19.17■□□□□ 0.66
SEMA6C-210ENST00000621728 TBC1D31Q96DN5 1066 aa19.17■□□□□ 0.66
SEMA6C-210ENST00000621728 RUNDC3BQ96NL0 473 aa19.17■□□□□ 0.66
SEMA6C-210ENST00000621728 PRMT1Q99873 361 aaKnown RBP19.17■□□□□ 0.66
SEMA6C-210ENST00000621728 LMAN2LQ9H0V9 348 aa19.17■□□□□ 0.66
SEMA6C-210ENST00000621728 SMG9Q9H0W8 520 aaKnown RBP19.17■□□□□ 0.66
SEMA6C-210ENST00000621728 NEUROG2Q9H2A3 272 aa19.17■□□□□ 0.66
SEMA6C-210ENST00000621728 IGFLR1Q9H665 355 aa19.17■□□□□ 0.66
SEMA6C-210ENST00000621728 NDFIP2Q9NV92 336 aa19.17■□□□□ 0.66
SEMA6C-210ENST00000621728 DRG1Q9Y295 367 aaKnown RBP19.17■□□□□ 0.66
SEMA6C-210ENST00000621728 UTP11Q9Y3A2 253 aaKnown RBP19.17■□□□□ 0.66
SEMA6C-210ENST00000621728 CPQQ9Y646 472 aa19.17■□□□□ 0.66
SEMA6C-210ENST00000621728 DOCK4Q8N1I0 1966 aa19.16■□□□□ 0.66
SEMA6C-210ENST00000621728 TRDMT1O14717 391 aaKnown RBP19.16■□□□□ 0.66
SEMA6C-210ENST00000621728 OLFM2O95897 454 aa19.16■□□□□ 0.66
SEMA6C-210ENST00000621728 PTPN2P17706 415 aa19.16■□□□□ 0.66
SEMA6C-210ENST00000621728 CORO1AP31146 461 aaKnown RBP19.16■□□□□ 0.66
SEMA6C-210ENST00000621728 SLC6A4P31645 630 aa19.16■□□□□ 0.66
SEMA6C-210ENST00000621728 RPL21P46778 160 aaKnown RBP19.16■□□□□ 0.66
SEMA6C-210ENST00000621728 KPNA1P52294 538 aaPredicted RBP19.16■□□□□ 0.66
SEMA6C-210ENST00000621728 NUGGCQ68CJ6 796 aa19.16■□□□□ 0.66
SEMA6C-210ENST00000621728 FBXL22Q6P050 247 aa19.16■□□□□ 0.66
SEMA6C-210ENST00000621728 RFWD3Q6PCD5 774 aa19.16■□□□□ 0.66
SEMA6C-210ENST00000621728 CHSY1Q86X52 802 aa19.16■□□□□ 0.66
SEMA6C-210ENST00000621728 IFT20Q8IY31 132 aa19.16■□□□□ 0.66
SEMA6C-210ENST00000621728 FAM71DQ8N9W8 422 aa19.16■□□□□ 0.66
SEMA6C-210ENST00000621728 GRK7Q8WTQ7 553 aa19.16■□□□□ 0.66
SEMA6C-210ENST00000621728 CELF6Q96J87 481 aaKnown RBP19.16■□□□□ 0.66
SEMA6C-210ENST00000621728 C1orf74Q96LT6 269 aa19.16■□□□□ 0.66
SEMA6C-210ENST00000621728 PRO3102Q9H379 93 aa19.16■□□□□ 0.66
SEMA6C-210ENST00000621728 SLC12A6Q9UHW9 1150 aa19.16■□□□□ 0.66
SEMA6C-210ENST00000621728 NFU1Q9UMS0 254 aa19.16■□□□□ 0.66
SEMA6C-210ENST00000621728 CNTN5O94779 1100 aa19.15■□□□□ 0.66
SEMA6C-210ENST00000621728 IFNB1P01574 187 aa19.15■□□□□ 0.66
SEMA6C-210ENST00000621728 KRT14P02533 472 aa19.15■□□□□ 0.66
SEMA6C-210ENST00000621728 RBL1P28749 1068 aa19.15■□□□□ 0.66
SEMA6C-210ENST00000621728 CDC25CP30307 473 aa19.15■□□□□ 0.66
SEMA6C-210ENST00000621728 HOXA9P31269 272 aa19.15■□□□□ 0.66
SEMA6C-210ENST00000621728 HOXC13P31276 330 aa19.15■□□□□ 0.66
SEMA6C-210ENST00000621728 COG7P83436 770 aa19.15■□□□□ 0.66
SEMA6C-210ENST00000621728 SMAD3P84022 425 aaKnown RBP19.15■□□□□ 0.66
SEMA6C-210ENST00000621728 PTK6Q13882 451 aa19.15■□□□□ 0.66
SEMA6C-210ENST00000621728 TEAD2Q15562 447 aa19.15■□□□□ 0.66
SEMA6C-210ENST00000621728 FAM133BQ5BKY9 247 aaKnown RBP19.15■□□□□ 0.66
SEMA6C-210ENST00000621728 TAB3Q8N5C8 712 aaPredicted RBP19.15■□□□□ 0.66
SEMA6C-210ENST00000621728 OLFM3Q96PB7 478 aa19.15■□□□□ 0.66
SEMA6C-210ENST00000621728 GCNAQ96QF7 691 aa19.15■□□□□ 0.66
SEMA6C-210ENST00000621728 LGMNQ99538 433 aa19.15■□□□□ 0.66
SEMA6C-210ENST00000621728 SLC46A2Q9BY10 475 aa19.15■□□□□ 0.66
SEMA6C-210ENST00000621728 FRMD8P1Q9BZ68 369 aaPredicted RBP19.15■□□□□ 0.66
SEMA6C-210ENST00000621728 PRKD2Q9BZL6 878 aa19.15■□□□□ 0.66
SEMA6C-210ENST00000621728 KLC2Q9H0B6 622 aa19.15■□□□□ 0.66
SEMA6C-210ENST00000621728 ASIC3Q9UHC3 531 aa19.15■□□□□ 0.66
SEMA6C-210ENST00000621728 ACSL4O60488 711 aa19.15■□□□□ 0.66
SEMA6C-210ENST00000621728 GAS8O95995 478 aa19.15■□□□□ 0.66
SEMA6C-210ENST00000621728 CKMP06732 381 aa19.15■□□□□ 0.66
SEMA6C-210ENST00000621728 HNRNPA1P09651 372 aaKnown RBP eCLIP19.15■□□□□ 0.66
SEMA6C-210ENST00000621728 TACR2P21452 398 aa19.15■□□□□ 0.66
SEMA6C-210ENST00000621728 EPHA5P54756 1037 aa19.15■□□□□ 0.66
SEMA6C-210ENST00000621728 NRG1Q02297 640 aaPredicted RBP19.15■□□□□ 0.66
SEMA6C-210ENST00000621728 ALFQ53S48 1182 aa19.15■□□□□ 0.66
SEMA6C-210ENST00000621728 POTEHQ6S545 545 aa19.15■□□□□ 0.66
SEMA6C-210ENST00000621728 TMC5Q6UXY8 1006 aa19.15■□□□□ 0.66
SEMA6C-210ENST00000621728 PDZD4Q76G19 769 aaPredicted RBP19.15■□□□□ 0.66
SEMA6C-210ENST00000621728 TFAP2DQ7Z6R9 452 aa19.15■□□□□ 0.66
SEMA6C-210ENST00000621728 DEPDC1BQ8WUY9 529 aa19.15■□□□□ 0.66
SEMA6C-210ENST00000621728 SEC14L1Q92503 715 aa19.15■□□□□ 0.66
SEMA6C-210ENST00000621728 PLD4Q96BZ4 506 aa19.15■□□□□ 0.66
SEMA6C-210ENST00000621728 APOL5Q9BWW9 433 aa19.15■□□□□ 0.66
SEMA6C-210ENST00000621728 RAB17Q9H0T7 212 aa19.15■□□□□ 0.66
SEMA6C-210ENST00000621728 GRHL1Q9NZI5 618 aa19.15■□□□□ 0.66
SEMA6C-210ENST00000621728 CDH22Q9UJ99 828 aa19.15■□□□□ 0.66
SEMA6C-210ENST00000621728 C2orf16Q68DN1 1984 aa19.15■□□□□ 0.66
SEMA6C-210ENST00000621728 C5orf42Q9H799 3197 aa19.14■□□□□ 0.65
SEMA6C-210ENST00000621728 C1RP00736 705 aa19.14■□□□□ 0.65
SEMA6C-210ENST00000621728 VAV1P15498 845 aa19.14■□□□□ 0.65
SEMA6C-210ENST00000621728 ECHS1P30084 290 aa19.14■□□□□ 0.65
SEMA6C-210ENST00000621728 HARS2P49590 506 aaKnown RBP19.14■□□□□ 0.65
SEMA6C-210ENST00000621728 GPR158Q5T848 1215 aa19.14■□□□□ 0.65
SEMA6C-210ENST00000621728 CFAP52Q8N1V2 620 aa19.14■□□□□ 0.65
SEMA6C-210ENST00000621728 MRPL38Q96DV4 380 aaKnown RBP19.14■□□□□ 0.65
SEMA6C-210ENST00000621728 GDAP1L1Q96MZ0 367 aa19.14■□□□□ 0.65
SEMA6C-210ENST00000621728 USP29Q9HBJ7 922 aa19.14■□□□□ 0.65
SEMA6C-210ENST00000621728 ZKSCAN7Q9P0L1 754 aaPredicted RBP19.14■□□□□ 0.65
SEMA6C-210ENST00000621728 AGO1Q9UL18 857 aaKnown RBP19.14■□□□□ 0.65
SEMA6C-210ENST00000621728 HELZP42694 1942 aaKnown RBP19.14■□□□□ 0.65
SEMA6C-210ENST00000621728 SHROOM3Q8TF72 1996 aa19.14■□□□□ 0.65
SEMA6C-210ENST00000621728 POLR3GO15318 223 aaPredicted RBP19.13■□□□□ 0.65
SEMA6C-210ENST00000621728 LINC01565O15544 149 aa19.13■□□□□ 0.65
SEMA6C-210ENST00000621728 KCNN4O15554 427 aa19.13■□□□□ 0.65
SEMA6C-210ENST00000621728 XYLBO75191 536 aa19.13■□□□□ 0.65
SEMA6C-210ENST00000621728 IVDP26440 423 aa19.13■□□□□ 0.65
SEMA6C-210ENST00000621728 NR2C2P49116 596 aa19.13■□□□□ 0.65
SEMA6C-210ENST00000621728 SGSHP51688 502 aa19.13■□□□□ 0.65
SEMA6C-210ENST00000621728 ZNF135P52742 658 aaPredicted RBP19.13■□□□□ 0.65
SEMA6C-210ENST00000621728 KCNC3Q14003 757 aa19.13■□□□□ 0.65
SEMA6C-210ENST00000621728 RTL10Q7L3V2 364 aa19.13■□□□□ 0.65
SEMA6C-210ENST00000621728 LGI2Q8N0V4 545 aa19.13■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 102.9 ms