RNA–Protein interactions for RNA: ENST00000620676.4

VPS13D-214, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13D, Length 16,320 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-214ENST00000620676 TYSND1Q2T9J0 566 aa5.14□□□□□ -1.59
VPS13D-214ENST00000620676 ZNF699Q32M78 642 aa5.14□□□□□ -1.59
VPS13D-214ENST00000620676 IL23RQ5VWK5 629 aa5.14□□□□□ -1.59
VPS13D-214ENST00000620676 MTFMTQ96DP5 389 aaKnown RBP5.14□□□□□ -1.59
VPS13D-214ENST00000620676 CBWD1Q9BRT8 395 aa5.14□□□□□ -1.59
VPS13D-214ENST00000620676 SLC17A6Q9P2U8 582 aa5.14□□□□□ -1.59
VPS13D-214ENST00000620676 SLC8A2Q9UPR5 921 aa5.14□□□□□ -1.59
VPS13D-214ENST00000620676 MXD4Q14582 209 aaPredicted RBP5.14□□□□□ -1.59
VPS13D-214ENST00000620676 HERC6Q8IVU3 1022 aa5.14□□□□□ -1.59
VPS13D-214ENST00000620676 TMEM35BQ8NCS4 154 aa5.14□□□□□ -1.59
VPS13D-214ENST00000620676 EMID1Q96A84 441 aaPredicted RBP5.14□□□□□ -1.59
VPS13D-214ENST00000620676 FSD1LQ9BXM9 530 aa5.14□□□□□ -1.59
VPS13D-214ENST00000620676 PCDHAC1Q9H158 963 aa5.14□□□□□ -1.59
VPS13D-214ENST00000620676 RASSF1Q9NS23 344 aa5.14□□□□□ -1.59
VPS13D-214ENST00000620676 PI4KBQ9UBF8 816 aa5.14□□□□□ -1.59
VPS13D-214ENST00000620676 MGAT5Q09328 741 aa5.14□□□□□ -1.59
VPS13D-214ENST00000620676 LAPTM5Q13571 262 aa5.14□□□□□ -1.59
VPS13D-214ENST00000620676 SLC44A2Q8IWA5 706 aaPredicted RBP5.14□□□□□ -1.59
VPS13D-214ENST00000620676 ATG16L2Q8NAA4 619 aa5.14□□□□□ -1.59
VPS13D-214ENST00000620676 TBC1D16Q8TBP0 767 aa5.14□□□□□ -1.59
VPS13D-214ENST00000620676 EVPLLA8MZ36 301 aa5.14□□□□□ -1.59
VPS13D-214ENST00000620676 KATNA1O75449 491 aa5.14□□□□□ -1.59
VPS13D-214ENST00000620676 PGLSO95336 258 aa5.14□□□□□ -1.59
VPS13D-214ENST00000620676 C9P02748 559 aa5.14□□□□□ -1.59
VPS13D-214ENST00000620676 LINC00032P0C843 101 aa5.14□□□□□ -1.59
VPS13D-214ENST00000620676 MPSTP25325 297 aa5.14□□□□□ -1.59
VPS13D-214ENST00000620676 MGAT1P26572 445 aa5.14□□□□□ -1.59
VPS13D-214ENST00000620676 NPTX2P47972 431 aa5.14□□□□□ -1.59
VPS13D-214ENST00000620676 PDK4Q16654 411 aa5.14□□□□□ -1.59
VPS13D-214ENST00000620676 C1QTNF12Q5T7M4 302 aa5.14□□□□□ -1.59
VPS13D-214ENST00000620676 FAM45BPQ6NSW5 357 aa5.14□□□□□ -1.59
VPS13D-214ENST00000620676 SPOCD1Q6ZMY3 1216 aa5.14□□□□□ -1.59
VPS13D-214ENST00000620676 SLC15A4Q8N697 577 aa5.14□□□□□ -1.59
VPS13D-214ENST00000620676 LNX1Q8TBB1 728 aaPredicted RBP5.14□□□□□ -1.59
VPS13D-214ENST00000620676 CEP95Q96GE4 821 aa5.14□□□□□ -1.59
VPS13D-214ENST00000620676 PKP2Q99959 881 aa5.14□□□□□ -1.59
VPS13D-214ENST00000620676 NUAK2Q9H093 628 aa5.14□□□□□ -1.59
VPS13D-214ENST00000620676 FAM217BQ9NTX9 383 aaPredicted RBP5.14□□□□□ -1.59
VPS13D-214ENST00000620676 TMEM161AQ9NX61 479 aa5.14□□□□□ -1.59
VPS13D-214ENST00000620676 ATPIF1Q9UII2 106 aa5.14□□□□□ -1.59
VPS13D-214ENST00000620676 FAM25EA8MYX2 175 aa5.14□□□□□ -1.59
VPS13D-214ENST00000620676 TISP43B9A030 160 aa5.14□□□□□ -1.59
VPS13D-214ENST00000620676 KCNK10P57789 538 aa5.14□□□□□ -1.59
VPS13D-214ENST00000620676 ERFEQ4G0M1 354 aa5.14□□□□□ -1.59
VPS13D-214ENST00000620676 ERAP2Q6P179 960 aa5.14□□□□□ -1.59
VPS13D-214ENST00000620676 ADGRF4Q8IZF3 695 aa5.14□□□□□ -1.59
VPS13D-214ENST00000620676 MCOLN3Q8TDD5 553 aa5.14□□□□□ -1.59
VPS13D-214ENST00000620676 LXNQ9BS40 222 aa5.14□□□□□ -1.59
VPS13D-214ENST00000620676 AVENQ9NQS1 362 aaPredicted RBP5.14□□□□□ -1.59
VPS13D-214ENST00000620676 BARHL2Q9NY43 387 aa5.14□□□□□ -1.59
VPS13D-214ENST00000620676 ZMYM5Q9UJ78 669 aa5.14□□□□□ -1.59
VPS13D-214ENST00000620676 UBDO15205 165 aa5.14□□□□□ -1.59
VPS13D-214ENST00000620676 H6PDO95479 791 aa5.14□□□□□ -1.59
VPS13D-214ENST00000620676 PENKP01210 267 aaPredicted RBP5.14□□□□□ -1.59
VPS13D-214ENST00000620676 XRCC1P18887 633 aaPredicted RBP5.14□□□□□ -1.59
VPS13D-214ENST00000620676 PIK3R1P27986 724 aa5.14□□□□□ -1.59
VPS13D-214ENST00000620676 MPP2Q14168 576 aa5.14□□□□□ -1.59
VPS13D-214ENST00000620676 BTBD16Q32M84 506 aa5.14□□□□□ -1.59
VPS13D-214ENST00000620676 PIGKQ92643 395 aa5.14□□□□□ -1.59
VPS13D-214ENST00000620676 TOP1MTQ969P6 601 aa5.14□□□□□ -1.59
VPS13D-214ENST00000620676 TM7SF2O76062 418 aa5.14□□□□□ -1.59
VPS13D-214ENST00000620676 CDK4P11802 303 aa5.14□□□□□ -1.59
VPS13D-214ENST00000620676 GSTA3Q16772 222 aa5.14□□□□□ -1.59
VPS13D-214ENST00000620676 GPAT2Q6NUI2 795 aa5.14□□□□□ -1.59
VPS13D-214ENST00000620676 CHST15Q7LFX5 561 aaPredicted RBP5.14□□□□□ -1.59
VPS13D-214ENST00000620676 SCFD1Q8WVM8 642 aa5.14□□□□□ -1.59
VPS13D-214ENST00000620676 ZNF317Q96PQ6 595 aaPredicted RBP5.14□□□□□ -1.59
VPS13D-214ENST00000620676 OSBPL11Q9BXB4 747 aa5.14□□□□□ -1.59
VPS13D-214ENST00000620676 TMEM206Q9H813 350 aa5.14□□□□□ -1.59
VPS13D-214ENST00000620676 KDM5BQ9UGL1 1544 aa5.14□□□□□ -1.59
VPS13D-214ENST00000620676 ANKARQ7Z5J8 1434 aa5.14□□□□□ -1.59
VPS13D-214ENST00000620676 MED26O95402 600 aa5.14□□□□□ -1.59
VPS13D-214ENST00000620676 PLATP00750 562 aa5.14□□□□□ -1.59
VPS13D-214ENST00000620676 PSAPP07602 524 aa5.14□□□□□ -1.59
VPS13D-214ENST00000620676 ARHGAP36Q6ZRI8 547 aa5.14□□□□□ -1.59
VPS13D-214ENST00000620676 SLC26A11Q86WA9 606 aa5.14□□□□□ -1.59
VPS13D-214ENST00000620676 CLYBLQ8N0X4 340 aa5.14□□□□□ -1.59
VPS13D-214ENST00000620676 MSANTD3Q96H12 275 aa5.14□□□□□ -1.59
VPS13D-214ENST00000620676 CAB39LQ9H9S4 337 aa5.14□□□□□ -1.59
VPS13D-214ENST00000620676 GRID1Q9ULK0 1009 aa5.14□□□□□ -1.59
VPS13D-214ENST00000620676 TRPC5OSA6NMA1 111 aa5.13□□□□□ -1.59
VPS13D-214ENST00000620676 AARS2Q5JTZ9 985 aaKnown RBP5.13□□□□□ -1.59
VPS13D-214ENST00000620676 ACAD10Q6JQN1 1059 aa5.13□□□□□ -1.59
VPS13D-214ENST00000620676 RAB43Q86YS6 212 aa5.13□□□□□ -1.59
VPS13D-214ENST00000620676 TRIM48Q8IWZ4 208 aa5.13□□□□□ -1.59
VPS13D-214ENST00000620676 FBXL20Q96IG2 436 aa5.13□□□□□ -1.59
VPS13D-214ENST00000620676 CHMP1AQ9HD42 196 aaPredicted RBP5.13□□□□□ -1.59
VPS13D-214ENST00000620676 XPNPEP1Q9NQW7 623 aa5.13□□□□□ -1.59
VPS13D-214ENST00000620676 MED7O43513 233 aa5.13□□□□□ -1.59
VPS13D-214ENST00000620676 BNIP3LO60238 219 aa5.13□□□□□ -1.59
VPS13D-214ENST00000620676 AP2A2O94973 939 aa5.13□□□□□ -1.59
VPS13D-214ENST00000620676 CCT8P50990 548 aa5.13□□□□□ -1.59
VPS13D-214ENST00000620676 MAPK12P53778 367 aa5.13□□□□□ -1.59
VPS13D-214ENST00000620676 INHBCP55103 352 aa5.13□□□□□ -1.59
VPS13D-214ENST00000620676 PID1Q7Z2X4 250 aa5.13□□□□□ -1.59
VPS13D-214ENST00000620676 SLC41A1Q8IVJ1 513 aa5.13□□□□□ -1.59
VPS13D-214ENST00000620676 ZCCHC9Q8N567 271 aaKnown RBP5.13□□□□□ -1.59
VPS13D-214ENST00000620676 MED15Q96RN5 788 aa5.13□□□□□ -1.59
VPS13D-214ENST00000620676 EBF4Q9BQW3 602 aa5.13□□□□□ -1.59
VPS13D-214ENST00000620676 MTMR12Q9C0I1 747 aa5.13□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms