RNA–Protein interactions for RNA: ENST00000620514.1

HMGN3-203, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

TSL 3 BASIC

Gene HMGN3, Length 1,010 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-203ENST00000620514 RBM43Q6ZSC3 357 aaKnown RBP17.76■□□□□ 0.43
HMGN3-203ENST00000620514 FAM124AQ86V42 546 aa17.76■□□□□ 0.43
HMGN3-203ENST00000620514 CIR1Q86X95 450 aaPredicted RBP17.76■□□□□ 0.43
HMGN3-203ENST00000620514 ATP6V0D2Q8N8Y2 350 aa17.76■□□□□ 0.43
HMGN3-203ENST00000620514 ZNF557Q8N988 423 aaPredicted RBP17.76■□□□□ 0.43
HMGN3-203ENST00000620514 CEP76Q8TAP6 659 aa17.76■□□□□ 0.43
HMGN3-203ENST00000620514 PRMT1Q99873 361 aaKnown RBP17.76■□□□□ 0.43
HMGN3-203ENST00000620514 GTPBP2Q9BX10 602 aaKnown RBP17.76■□□□□ 0.43
HMGN3-203ENST00000620514 VPS16Q9H269 839 aa17.76■□□□□ 0.43
HMGN3-203ENST00000620514 SYNCQ9H7C4 482 aa17.76■□□□□ 0.43
HMGN3-203ENST00000620514 SLTMQ9NWH9 1034 aaKnown RBP eCLIP17.76■□□□□ 0.43
HMGN3-203ENST00000620514 ADAMTS9Q9P2N4 1935 aa17.76■□□□□ 0.43
HMGN3-203ENST00000620514 H0Y626 953 aa17.75■□□□□ 0.43
HMGN3-203ENST00000620514 DAB1O75553 588 aa17.75■□□□□ 0.43
HMGN3-203ENST00000620514 IGLV3-19P01714 112 aa17.75■□□□□ 0.43
HMGN3-203ENST00000620514 OXTRP30559 389 aa17.75■□□□□ 0.43
HMGN3-203ENST00000620514 NUMBP49757 651 aa17.75■□□□□ 0.43
HMGN3-203ENST00000620514 KLK7P49862 253 aa17.75■□□□□ 0.43
HMGN3-203ENST00000620514 NOVA1P51513 510 aaKnown RBP17.75■□□□□ 0.43
HMGN3-203ENST00000620514 NME3Q13232 169 aa17.75■□□□□ 0.43
HMGN3-203ENST00000620514 OTUD1Q5VV17 481 aaPredicted RBP17.75■□□□□ 0.43
HMGN3-203ENST00000620514 CDKAL1Q5VV42 579 aa17.75■□□□□ 0.43
HMGN3-203ENST00000620514 SLC26A9Q7LBE3 791 aa17.75■□□□□ 0.43
HMGN3-203ENST00000620514 APCDD1Q8J025 514 aa17.75■□□□□ 0.43
HMGN3-203ENST00000620514 OR2I1PQ8NGU4 316 aa17.75■□□□□ 0.43
HMGN3-203ENST00000620514 FOXJ1Q92949 421 aa17.75■□□□□ 0.43
HMGN3-203ENST00000620514 RNF34Q969K3 372 aa17.75■□□□□ 0.43
HMGN3-203ENST00000620514 MRGPRX3Q96LB0 322 aa17.75■□□□□ 0.43
HMGN3-203ENST00000620514 GBP4Q96PP9 640 aa17.75■□□□□ 0.43
HMGN3-203ENST00000620514 ADAM33Q9BZ11 813 aa17.75■□□□□ 0.43
HMGN3-203ENST00000620514 PDCL3Q9H2J4 239 aa17.75■□□□□ 0.43
HMGN3-203ENST00000620514 CEP83Q9Y592 693 aa17.75■□□□□ 0.43
HMGN3-203ENST00000620514 PCDH15Q96QU1 1955 aa17.75■□□□□ 0.43
HMGN3-203ENST00000620514 MEI4A8MW99 385 aa17.74■□□□□ 0.43
HMGN3-203ENST00000620514 F5H5T6 163 aa17.74■□□□□ 0.43
HMGN3-203ENST00000620514 ABCB4P21439 1286 aa17.74■□□□□ 0.43
HMGN3-203ENST00000620514 CCR1P32246 355 aa17.74■□□□□ 0.43
HMGN3-203ENST00000620514 GGCXP38435 758 aa17.74■□□□□ 0.43
HMGN3-203ENST00000620514 RPS14P62263 151 aaKnown RBP17.74■□□□□ 0.43
HMGN3-203ENST00000620514 GFPT1Q06210 699 aaPredicted RBP17.74■□□□□ 0.43
HMGN3-203ENST00000620514 KRT31Q15323 416 aa17.74■□□□□ 0.43
HMGN3-203ENST00000620514 WDR45BQ5MNZ6 344 aa17.74■□□□□ 0.43
HMGN3-203ENST00000620514 SYCP2LQ5T4T6 812 aa17.74■□□□□ 0.43
HMGN3-203ENST00000620514 SH3PXD2AQ5TCZ1 1133 aa17.74■□□□□ 0.43
HMGN3-203ENST00000620514 DCAF12L1Q5VU92 463 aa17.74■□□□□ 0.43
HMGN3-203ENST00000620514 NOP9Q86U38 636 aaKnown RBP17.74■□□□□ 0.43
HMGN3-203ENST00000620514 CCDC117Q8IWD4 279 aaPredicted RBP17.74■□□□□ 0.43
HMGN3-203ENST00000620514 TMEM35BQ8NCS4 154 aa17.74■□□□□ 0.43
HMGN3-203ENST00000620514 ZNF397Q8NF99 534 aaPredicted RBP17.74■□□□□ 0.43
HMGN3-203ENST00000620514 NUP58Q9BVL2 599 aa17.74■□□□□ 0.43
HMGN3-203ENST00000620514 GANQ9H2C0 597 aa17.74■□□□□ 0.43
HMGN3-203ENST00000620514 KIAA1522Q9P206 1035 aaPredicted RBP17.74■□□□□ 0.43
HMGN3-203ENST00000620514 SUN2Q9UH99 717 aa17.74■□□□□ 0.43
HMGN3-203ENST00000620514 SLC12A6Q9UHW9 1150 aa17.74■□□□□ 0.43
HMGN3-203ENST00000620514 ERVW-1Q9UQF0 538 aa17.74■□□□□ 0.43
HMGN3-203ENST00000620514 ASCC3Q8N3C0 2202 aaKnown RBP17.74■□□□□ 0.43
HMGN3-203ENST00000620514 F8VZ95 297 aa17.73■□□□□ 0.43
HMGN3-203ENST00000620514 M0QYT0 321 aa17.73■□□□□ 0.43
HMGN3-203ENST00000620514 ASLP04424 464 aa17.73■□□□□ 0.43
HMGN3-203ENST00000620514 C7P10643 843 aa17.73■□□□□ 0.43
HMGN3-203ENST00000620514 SLC2A3P11169 496 aa17.73■□□□□ 0.43
HMGN3-203ENST00000620514 TFE3P19532 575 aaPredicted RBP17.73■□□□□ 0.43
HMGN3-203ENST00000620514 CDH5P33151 784 aaPredicted RBP17.73■□□□□ 0.43
HMGN3-203ENST00000620514 NOS2P35228 1153 aa17.73■□□□□ 0.43
HMGN3-203ENST00000620514 IRAK1P51617 712 aa17.73■□□□□ 0.43
HMGN3-203ENST00000620514 SNX16P57768 344 aa17.73■□□□□ 0.43
HMGN3-203ENST00000620514 RNASE9P60153 205 aaKnown RBP17.73■□□□□ 0.43
HMGN3-203ENST00000620514 ST8SIA6P61647 398 aa17.73■□□□□ 0.43
HMGN3-203ENST00000620514 CENPCQ03188 943 aa17.73■□□□□ 0.43
HMGN3-203ENST00000620514 PLEKHG6Q3KR16 790 aa17.73■□□□□ 0.43
HMGN3-203ENST00000620514 C2CD6Q53TS8 623 aa17.73■□□□□ 0.43
HMGN3-203ENST00000620514 FBXL22Q6P050 247 aa17.73■□□□□ 0.43
HMGN3-203ENST00000620514 RABEPKQ7Z6M1 372 aa17.73■□□□□ 0.43
HMGN3-203ENST00000620514 CCAR2Q8N163 923 aaKnown RBP17.73■□□□□ 0.43
HMGN3-203ENST00000620514 CADM4Q8NFZ8 388 aa17.73■□□□□ 0.43
HMGN3-203ENST00000620514 DNASE2BQ8WZ79 361 aa17.73■□□□□ 0.43
HMGN3-203ENST00000620514 IGSF8Q969P0 613 aa17.73■□□□□ 0.43
HMGN3-203ENST00000620514 CNTNAP3BQ96NU0 1288 aa17.73■□□□□ 0.43
HMGN3-203ENST00000620514 STK33Q9BYT3 514 aa17.73■□□□□ 0.43
HMGN3-203ENST00000620514 CNTNAP3Q9BZ76 1288 aa17.73■□□□□ 0.43
HMGN3-203ENST00000620514 MIR1-1HGQ9H1L0 117 aa17.73■□□□□ 0.43
HMGN3-203ENST00000620514 FANCLQ9NW38 375 aa17.73■□□□□ 0.43
HMGN3-203ENST00000620514 NUMA1Q14980 2115 aa17.72■□□□□ 0.43
HMGN3-203ENST00000620514 METTL12A8MUP2 240 aa17.72■□□□□ 0.43
HMGN3-203ENST00000620514 TTC34A8MYJ7 566 aa17.72■□□□□ 0.43
HMGN3-203ENST00000620514 ARHGAP33O14559 1287 aa17.72■□□□□ 0.43
HMGN3-203ENST00000620514 SIN3BO75182 1162 aa17.72■□□□□ 0.43
HMGN3-203ENST00000620514 MMEP08473 750 aa17.72■□□□□ 0.43
HMGN3-203ENST00000620514 PMLP29590 882 aa17.72■□□□□ 0.43
HMGN3-203ENST00000620514 ACSL1P33121 698 aa17.72■□□□□ 0.43
HMGN3-203ENST00000620514 MATKP42679 507 aa17.72■□□□□ 0.43
HMGN3-203ENST00000620514 ATXN3P54252 364 aaPredicted RBP17.72■□□□□ 0.43
HMGN3-203ENST00000620514 HNRNPA1L2Q32P51 320 aaKnown RBP17.72■□□□□ 0.43
HMGN3-203ENST00000620514 C14orf80Q86SX3 495 aa17.72■□□□□ 0.43
HMGN3-203ENST00000620514 DHX40Q8IX18 779 aaKnown RBP17.72■□□□□ 0.43
HMGN3-203ENST00000620514 ZCCHC9Q8N567 271 aaKnown RBP17.72■□□□□ 0.43
HMGN3-203ENST00000620514 MINDY1Q8N5J2 469 aa17.72■□□□□ 0.43
HMGN3-203ENST00000620514 DEFB124Q8NES8 71 aa17.72■□□□□ 0.43
HMGN3-203ENST00000620514 NPY6RQ99463 290 aa17.72■□□□□ 0.43
HMGN3-203ENST00000620514 C6orf106Q9H6K1 298 aaPredicted RBP17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms