RNA–Protein interactions for RNA: ENST00000620204.3

TNFAIP3-210, Transcript of TNF alpha induced protein 3, humanhuman

TSL 5 BASIC

Gene TNFAIP3, Length 3,817 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-210ENST00000620204 FARP1Q9Y4F1 1045 aaPredicted RBP10.01□□□□□ -0.81
TNFAIP3-210ENST00000620204 NR2E3Q9Y5X4 410 aa10.01□□□□□ -0.81
TNFAIP3-210ENST00000620204 C7orf72A4D263 438 aa10.01□□□□□ -0.81
TNFAIP3-210ENST00000620204 ZNF839A8K0R7 811 aa10.01□□□□□ -0.81
TNFAIP3-210ENST00000620204 BMXP51813 675 aa10.01□□□□□ -0.81
TNFAIP3-210ENST00000620204 GTF2A2P52657 109 aa10.01□□□□□ -0.81
TNFAIP3-210ENST00000620204 TPTEP56180 551 aa10.01□□□□□ -0.81
TNFAIP3-210ENST00000620204 ZNF829Q3KNS6 432 aaPredicted RBP10.01□□□□□ -0.81
TNFAIP3-210ENST00000620204 NANOGP8Q6NSW7 305 aa10.01□□□□□ -0.81
TNFAIP3-210ENST00000620204 ZFP1Q6P2D0 407 aa10.01□□□□□ -0.81
TNFAIP3-210ENST00000620204 PRR23BQ6ZRT6 265 aa10.01□□□□□ -0.81
TNFAIP3-210ENST00000620204 TDRD5Q8NAT2 981 aaKnown RBP10.01□□□□□ -0.81
TNFAIP3-210ENST00000620204 SLC29A1Q99808 456 aa10.01□□□□□ -0.81
TNFAIP3-210ENST00000620204 XPO5Q9HAV4 1204 aaKnown RBP eCLIP10.01□□□□□ -0.81
TNFAIP3-210ENST00000620204 PNPLA3Q9NST1 481 aa10.01□□□□□ -0.81
TNFAIP3-210ENST00000620204 SLC38A7Q9NVC3 462 aa10.01□□□□□ -0.81
TNFAIP3-210ENST00000620204 TBX20Q9UMR3 447 aa10.01□□□□□ -0.81
TNFAIP3-210ENST00000620204 AP4E1Q9UPM8 1137 aa10.01□□□□□ -0.81
TNFAIP3-210ENST00000620204 BCORQ6W2J9 1755 aa10.01□□□□□ -0.81
TNFAIP3-210ENST00000620204 IQCA1LA6NCM1 817 aa10.01□□□□□ -0.81
TNFAIP3-210ENST00000620204 YDJCA8MPS7 323 aa10.01□□□□□ -0.81
TNFAIP3-210ENST00000620204 GOLGA8TH3BQL2 631 aa10.01□□□□□ -0.81
TNFAIP3-210ENST00000620204 KRT7P08729 469 aa10.01□□□□□ -0.81
TNFAIP3-210ENST00000620204 TCEA1P23193 301 aaKnown RBP10.01□□□□□ -0.81
TNFAIP3-210ENST00000620204 YWHABP31946 246 aaKnown RBP10.01□□□□□ -0.81
TNFAIP3-210ENST00000620204 GRIA1P42261 906 aa10.01□□□□□ -0.81
TNFAIP3-210ENST00000620204 ABCE1P61221 599 aaKnown RBP10.01□□□□□ -0.81
TNFAIP3-210ENST00000620204 OCA2Q04671 838 aa10.01□□□□□ -0.81
TNFAIP3-210ENST00000620204 MGAT5BQ3V5L5 792 aa10.01□□□□□ -0.81
TNFAIP3-210ENST00000620204 AARS2Q5JTZ9 985 aaKnown RBP10.01□□□□□ -0.81
TNFAIP3-210ENST00000620204 APOBEC3HQ6NTF7 200 aaKnown RBP10.01□□□□□ -0.81
TNFAIP3-210ENST00000620204 ADGRF2Q8IZF7 708 aa10.01□□□□□ -0.81
TNFAIP3-210ENST00000620204 SLC35B2Q8TB61 432 aa10.01□□□□□ -0.81
TNFAIP3-210ENST00000620204 MKL1Q969V6 931 aa10.01□□□□□ -0.81
TNFAIP3-210ENST00000620204 CEP170P1Q96L14 293 aa10.01□□□□□ -0.81
TNFAIP3-210ENST00000620204 TSNARE1Q96NA8 513 aa10.01□□□□□ -0.81
TNFAIP3-210ENST00000620204 CEP41Q9BYV8 373 aa10.01□□□□□ -0.81
TNFAIP3-210ENST00000620204 EFCAB1Q9HAE3 211 aa10.01□□□□□ -0.81
TNFAIP3-210ENST00000620204 STAU2Q9NUL3 570 aaKnown RBP eCLIP10.01□□□□□ -0.81
TNFAIP3-210ENST00000620204 IGSF9Q9P2J2 1179 aa10.01□□□□□ -0.81
TNFAIP3-210ENST00000620204 TMEM98Q9Y2Y6 226 aa10.01□□□□□ -0.81
TNFAIP3-210ENST00000620204 FAM32AQ9Y421 112 aaKnown RBP10.01□□□□□ -0.81
TNFAIP3-210ENST00000620204 SNED1Q8TER0 1413 aa10.01□□□□□ -0.81
TNFAIP3-210ENST00000620204 GPC4O75487 556 aa10□□□□□ -0.81
TNFAIP3-210ENST00000620204 NDUFB10O96000 172 aa10□□□□□ -0.81
TNFAIP3-210ENST00000620204 GH2P01242 217 aa10□□□□□ -0.81
TNFAIP3-210ENST00000620204 RBL1P28749 1068 aa10□□□□□ -0.81
TNFAIP3-210ENST00000620204 BCAR1P56945 870 aa10□□□□□ -0.81
TNFAIP3-210ENST00000620204 DNASE1L3Q13609 305 aa10□□□□□ -0.81
TNFAIP3-210ENST00000620204 CUL2Q13617 745 aa10□□□□□ -0.81
TNFAIP3-210ENST00000620204 CEACAM7Q14002 265 aa10□□□□□ -0.81
TNFAIP3-210ENST00000620204 PIGHQ14442 188 aaPredicted RBP10□□□□□ -0.81
TNFAIP3-210ENST00000620204 INAQ16352 499 aa10□□□□□ -0.81
TNFAIP3-210ENST00000620204 PITRM1Q5JRX3 1037 aa10□□□□□ -0.81
TNFAIP3-210ENST00000620204 DACT2Q5SW24 774 aa10□□□□□ -0.81
TNFAIP3-210ENST00000620204 UNC5AQ6ZN44 842 aa10□□□□□ -0.81
TNFAIP3-210ENST00000620204 GPD1LQ8N335 351 aa10□□□□□ -0.81
TNFAIP3-210ENST00000620204 CNDP1Q96KN2 507 aa10□□□□□ -0.81
TNFAIP3-210ENST00000620204 ZNF778Q96MU6 729 aa10□□□□□ -0.81
TNFAIP3-210ENST00000620204 FRMD8Q9BZ67 464 aaPredicted RBP10□□□□□ -0.81
TNFAIP3-210ENST00000620204 CCDC90BQ9GZT6 254 aa10□□□□□ -0.81
TNFAIP3-210ENST00000620204 GIN1Q9NXP7 522 aa10□□□□□ -0.81
TNFAIP3-210ENST00000620204 PLK2Q9NYY3 685 aa10□□□□□ -0.81
TNFAIP3-210ENST00000620204 TMEM216Q9P0N5 145 aa10□□□□□ -0.81
TNFAIP3-210ENST00000620204 ITGB1BP2Q9UKP3 347 aa10□□□□□ -0.81
TNFAIP3-210ENST00000620204 RNF11Q9Y3C5 154 aa10□□□□□ -0.81
TNFAIP3-210ENST00000620204 AFG3L2Q9Y4W6 797 aa10□□□□□ -0.81
TNFAIP3-210ENST00000620204 CDY2AQ9Y6F7 541 aa10□□□□□ -0.81
TNFAIP3-210ENST00000620204 CDY1Q9Y6F8 540 aa10□□□□□ -0.81
TNFAIP3-210ENST00000620204 UBR3Q6ZT12 1888 aa10□□□□□ -0.81
TNFAIP3-210ENST00000620204 MICAL3Q7RTP6 2002 aa10□□□□□ -0.81
TNFAIP3-210ENST00000620204 TMEM191CA6NGB0 347 aa10□□□□□ -0.81
TNFAIP3-210ENST00000620204 BIRC5O15392 142 aa10□□□□□ -0.81
TNFAIP3-210ENST00000620204 SPAG6O75602 509 aa10□□□□□ -0.81
TNFAIP3-210ENST00000620204 PSMD10O75832 226 aa10□□□□□ -0.81
TNFAIP3-210ENST00000620204 FBXO21O94952 628 aa10□□□□□ -0.81
TNFAIP3-210ENST00000620204 CALB1P05937 261 aa10□□□□□ -0.81
TNFAIP3-210ENST00000620204 ZNF12P17014 697 aa10□□□□□ -0.81
TNFAIP3-210ENST00000620204 CD247P20963 164 aa10□□□□□ -0.81
TNFAIP3-210ENST00000620204 OSTNP61366 133 aa10□□□□□ -0.81
TNFAIP3-210ENST00000620204 YWHAZP63104 245 aaKnown RBP10□□□□□ -0.81
TNFAIP3-210ENST00000620204 CYP24A1Q07973 514 aa10□□□□□ -0.81
TNFAIP3-210ENST00000620204 SAMD7Q7Z3H4 446 aa10□□□□□ -0.81
TNFAIP3-210ENST00000620204 MPP5Q8N3R9 675 aa10□□□□□ -0.81
TNFAIP3-210ENST00000620204 SLC15A4Q8N697 577 aa10□□□□□ -0.81
TNFAIP3-210ENST00000620204 SGF29Q96ES7 293 aa10□□□□□ -0.81
TNFAIP3-210ENST00000620204 APBA2Q99767 749 aa10□□□□□ -0.81
TNFAIP3-210ENST00000620204 EHD1Q9H4M9 534 aa10□□□□□ -0.81
TNFAIP3-210ENST00000620204 EHMT1Q9H9B1 1298 aa10□□□□□ -0.81
TNFAIP3-210ENST00000620204 TJP2Q9UDY2 1190 aa10□□□□□ -0.81
TNFAIP3-210ENST00000620204 NUB1Q9Y5A7 615 aa10□□□□□ -0.81
TNFAIP3-210ENST00000620204 AP1G1O43747 822 aa10□□□□□ -0.81
TNFAIP3-210ENST00000620204 GNAO1P09471 354 aa10□□□□□ -0.81
TNFAIP3-210ENST00000620204 SNHG28P0DPA3 235 aa10□□□□□ -0.81
TNFAIP3-210ENST00000620204 S100A1P23297 94 aa10□□□□□ -0.81
TNFAIP3-210ENST00000620204 KDELR1P24390 212 aa10□□□□□ -0.81
TNFAIP3-210ENST00000620204 CCR10P46092 362 aa10□□□□□ -0.81
TNFAIP3-210ENST00000620204 NPTX2P47972 431 aa10□□□□□ -0.81
TNFAIP3-210ENST00000620204 TUFMP49411 452 aaKnown RBP10□□□□□ -0.81
TNFAIP3-210ENST00000620204 RARRES1P49788 294 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms