RNA–Protein interactions for RNA: ENST00000618999.4

SRGAP3-213, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 5 BASIC

Gene SRGAP3, Length 3,929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-213ENST00000618999 LRGUKQ96M69 825 aa7.19□□□□□ -1.26
SRGAP3-213ENST00000618999 TSNARE1Q96NA8 513 aa7.19□□□□□ -1.26
SRGAP3-213ENST00000618999 KLHL4Q9C0H6 718 aa7.19□□□□□ -1.26
SRGAP3-213ENST00000618999 STARD7Q9NQZ5 370 aa7.19□□□□□ -1.26
SRGAP3-213ENST00000618999 TRMT13Q9NUP7 481 aaKnown RBP7.19□□□□□ -1.26
SRGAP3-213ENST00000618999 THEGQ9P2T0 379 aa7.19□□□□□ -1.26
SRGAP3-213ENST00000618999 POLIQ9UNA4 740 aa7.19□□□□□ -1.26
SRGAP3-213ENST00000618999 ASB3Q9Y575 518 aa7.19□□□□□ -1.26
SRGAP3-213ENST00000618999 COMMD3-BMI1R4GMX3 469 aa7.19□□□□□ -1.26
SRGAP3-213ENST00000618999 LRRC37A2A6NM11 1700 aa7.18□□□□□ -1.26
SRGAP3-213ENST00000618999 ARID2Q68CP9 1835 aa7.18□□□□□ -1.26
SRGAP3-213ENST00000618999 TMEM191CA6NGB0 347 aa7.18□□□□□ -1.26
SRGAP3-213ENST00000618999 GALR2O43603 387 aaPredicted RBP7.18□□□□□ -1.26
SRGAP3-213ENST00000618999 PRPSAP2O60256 369 aa7.18□□□□□ -1.26
SRGAP3-213ENST00000618999 GNRH1P01148 92 aa7.18□□□□□ -1.26
SRGAP3-213ENST00000618999 APRTP07741 180 aa7.18□□□□□ -1.26
SRGAP3-213ENST00000618999 AXLP30530 894 aa7.18□□□□□ -1.26
SRGAP3-213ENST00000618999 CDH6P55285 790 aa7.18□□□□□ -1.26
SRGAP3-213ENST00000618999 GPX6P59796 221 aa7.18□□□□□ -1.26
SRGAP3-213ENST00000618999 LIN52Q52LA3 116 aa7.18□□□□□ -1.26
SRGAP3-213ENST00000618999 FNBP1LQ5T0N5 605 aa7.18□□□□□ -1.26
SRGAP3-213ENST00000618999 HACE1Q8IYU2 909 aa7.18□□□□□ -1.26
SRGAP3-213ENST00000618999 ARRDC4Q8NCT1 418 aa7.18□□□□□ -1.26
SRGAP3-213ENST00000618999 BEST2Q8NFU1 509 aa7.18□□□□□ -1.26
SRGAP3-213ENST00000618999 OR6Y1Q8NGX8 325 aa7.18□□□□□ -1.26
SRGAP3-213ENST00000618999 FAM81AQ8TBF8 368 aa7.18□□□□□ -1.26
SRGAP3-213ENST00000618999 ADAM32Q8TC27 787 aa7.18□□□□□ -1.26
SRGAP3-213ENST00000618999 JADE3Q92613 823 aa7.18□□□□□ -1.26
SRGAP3-213ENST00000618999 PTPRN2Q92932 1015 aa7.18□□□□□ -1.26
SRGAP3-213ENST00000618999 PTCD3Q96EY7 689 aaKnown RBP7.18□□□□□ -1.26
SRGAP3-213ENST00000618999 SERPINI1Q99574 410 aa7.18□□□□□ -1.26
SRGAP3-213ENST00000618999 NDNQ99608 321 aa7.18□□□□□ -1.26
SRGAP3-213ENST00000618999 FRMD8Q9BZ67 464 aaPredicted RBP7.18□□□□□ -1.26
SRGAP3-213ENST00000618999 ZCWPW1Q9H0M4 648 aa7.18□□□□□ -1.26
SRGAP3-213ENST00000618999 EURLQ9NYK6 297 aa7.18□□□□□ -1.26
SRGAP3-213ENST00000618999 PAK5Q9P286 719 aa7.18□□□□□ -1.26
SRGAP3-213ENST00000618999 ST3GAL5Q9UNP4 418 aa7.18□□□□□ -1.26
SRGAP3-213ENST00000618999 STAMBPO95630 424 aa7.18□□□□□ -1.26
SRGAP3-213ENST00000618999 ATP5BP06576 529 aaKnown RBP7.18□□□□□ -1.26
SRGAP3-213ENST00000618999 SETSIPP0DME0 302 aa7.18□□□□□ -1.26
SRGAP3-213ENST00000618999 MMP8P22894 467 aa7.18□□□□□ -1.26
SRGAP3-213ENST00000618999 GCAP28676 217 aa7.18□□□□□ -1.26
SRGAP3-213ENST00000618999 RAP1GAPP47736 663 aa7.18□□□□□ -1.26
SRGAP3-213ENST00000618999 CDK7P50613 346 aa7.18□□□□□ -1.26
SRGAP3-213ENST00000618999 PCBP1Q15365 356 aaKnown RBP eCLIP7.18□□□□□ -1.26
SRGAP3-213ENST00000618999 PLEKHG4Q58EX7 1191 aa7.18□□□□□ -1.26
SRGAP3-213ENST00000618999 FSCBQ5H9T9 825 aa7.18□□□□□ -1.26
SRGAP3-213ENST00000618999 ANKRD22Q5VYY1 191 aa7.18□□□□□ -1.26
SRGAP3-213ENST00000618999 C1orf228Q6PIY5 440 aa7.18□□□□□ -1.26
SRGAP3-213ENST00000618999 APBB2Q92870 758 aa7.18□□□□□ -1.26
SRGAP3-213ENST00000618999 SKA1Q96BD8 255 aa7.18□□□□□ -1.26
SRGAP3-213ENST00000618999 CMTM5Q96DZ9 223 aa7.18□□□□□ -1.26
SRGAP3-213ENST00000618999 ZNF518BQ9C0D4 1074 aa7.18□□□□□ -1.26
SRGAP3-213ENST00000618999 UPF3AQ9H1J1 476 aaKnown RBP7.18□□□□□ -1.26
SRGAP3-213ENST00000618999 SUDS3Q9H7L9 328 aaPredicted RBP7.18□□□□□ -1.26
SRGAP3-213ENST00000618999 RSAD1Q9HA92 442 aa7.18□□□□□ -1.26
SRGAP3-213ENST00000618999 CISHQ9NSE2 258 aa7.18□□□□□ -1.26
SRGAP3-213ENST00000618999 ASNSD1Q9NWL6 643 aa7.18□□□□□ -1.26
SRGAP3-213ENST00000618999 PCDHB11Q9Y5F2 797 aa7.18□□□□□ -1.26
SRGAP3-213ENST00000618999 HEY1Q9Y5J3 304 aa7.18□□□□□ -1.26
SRGAP3-213ENST00000618999 TCRBV9S1A1TA0A576 114 aa7.18□□□□□ -1.26
SRGAP3-213ENST00000618999 MEI4A8MW99 385 aa7.18□□□□□ -1.26
SRGAP3-213ENST00000618999 GPR182O15218 404 aa7.18□□□□□ -1.26
SRGAP3-213ENST00000618999 KCNN4O15554 427 aa7.18□□□□□ -1.26
SRGAP3-213ENST00000618999 CABYRO75952 493 aa7.18□□□□□ -1.26
SRGAP3-213ENST00000618999 USP1O94782 785 aa7.18□□□□□ -1.26
SRGAP3-213ENST00000618999 IGHA2P01877 340 aa7.18□□□□□ -1.26
SRGAP3-213ENST00000618999 CDKN2BP42772 138 aa7.18□□□□□ -1.26
SRGAP3-213ENST00000618999 SERPINB9P50453 376 aa7.18□□□□□ -1.26
SRGAP3-213ENST00000618999 BMPR2Q13873 1038 aa7.18□□□□□ -1.26
SRGAP3-213ENST00000618999 PRKD1Q15139 912 aaPredicted RBP7.18□□□□□ -1.26
SRGAP3-213ENST00000618999 CNGA3Q16281 694 aa7.18□□□□□ -1.26
SRGAP3-213ENST00000618999 MROH9Q5TGP6 573 aa7.18□□□□□ -1.26
SRGAP3-213ENST00000618999 BSPRYQ5W0U4 402 aa7.18□□□□□ -1.26
SRGAP3-213ENST00000618999 OR52E8Q6IFG1 317 aa7.18□□□□□ -1.26
SRGAP3-213ENST00000618999 DHDDSQ86SQ9 333 aa7.18□□□□□ -1.26
SRGAP3-213ENST00000618999 SLC44A1Q8WWI5 657 aa7.18□□□□□ -1.26
SRGAP3-213ENST00000618999 PYDC1Q8WXC3 89 aa7.18□□□□□ -1.26
SRGAP3-213ENST00000618999 CLPTM1LQ96KA5 538 aa7.18□□□□□ -1.26
SRGAP3-213ENST00000618999 IER2Q9BTL4 223 aa7.18□□□□□ -1.26
SRGAP3-213ENST00000618999 PRKD2Q9BZL6 878 aa7.18□□□□□ -1.26
SRGAP3-213ENST00000618999 TGIF2Q9GZN2 237 aa7.18□□□□□ -1.26
SRGAP3-213ENST00000618999 GPAMQ9HCL2 828 aa7.18□□□□□ -1.26
SRGAP3-213ENST00000618999 FKBPLQ9UIM3 349 aa7.18□□□□□ -1.26
SRGAP3-213ENST00000618999 EFR3BQ9Y2G0 817 aa7.18□□□□□ -1.26
SRGAP3-213ENST00000618999 SNX9Q9Y5X1 595 aa7.18□□□□□ -1.26
SRGAP3-213ENST00000618999 CLUHO75153 1309 aa7.17□□□□□ -1.26
SRGAP3-213ENST00000618999 ARHGAP10A1A4S6 786 aa7.17□□□□□ -1.26
SRGAP3-213ENST00000618999 XPOTO43592 962 aaKnown RBP7.17□□□□□ -1.26
SRGAP3-213ENST00000618999 COL9A1P20849 921 aa7.17□□□□□ -1.26
SRGAP3-213ENST00000618999 NEK3P51956 506 aa7.17□□□□□ -1.26
SRGAP3-213ENST00000618999 RAP1GDS1P52306 607 aa7.17□□□□□ -1.26
SRGAP3-213ENST00000618999 DPYSL3Q14195 570 aa7.17□□□□□ -1.26
SRGAP3-213ENST00000618999 OASLQ15646 514 aaKnown RBP7.17□□□□□ -1.26
SRGAP3-213ENST00000618999 SWI5Q1ZZU3 235 aa7.17□□□□□ -1.26
SRGAP3-213ENST00000618999 PRPF38BQ5VTL8 546 aaKnown RBP7.17□□□□□ -1.26
SRGAP3-213ENST00000618999 BBS12Q6ZW61 710 aa7.17□□□□□ -1.26
SRGAP3-213ENST00000618999 KLHDC9Q8NEP7 349 aa7.17□□□□□ -1.26
SRGAP3-213ENST00000618999 GDPD5Q8WTR4 605 aa7.17□□□□□ -1.26
SRGAP3-213ENST00000618999 DCAKDQ8WVC6 231 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms