RNA–Protein interactions for RNA: ENST00000617428.2

AC008878.3-201, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene AC008878.3, Length 4,964 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC008878.3-201ENST00000617428 DNMT3LQ9UJW3 386 aa18.91■□□□□ 0.62
AC008878.3-201ENST00000617428 ASTN2O75129 1339 aaPredicted RBP18.91■□□□□ 0.62
AC008878.3-201ENST00000617428 PPLO60437 1756 aa18.91■□□□□ 0.62
AC008878.3-201ENST00000617428 CARNS1A5YM72 827 aa18.91■□□□□ 0.62
AC008878.3-201ENST00000617428 NR5A2O00482 541 aa18.91■□□□□ 0.62
AC008878.3-201ENST00000617428 CSH1P0DML2 217 aa18.91■□□□□ 0.62
AC008878.3-201ENST00000617428 CSH2P0DML3 217 aa18.91■□□□□ 0.62
AC008878.3-201ENST00000617428 CYP2A7P20853 494 aa18.91■□□□□ 0.62
AC008878.3-201ENST00000617428 ZACNQ401N2 412 aa18.91■□□□□ 0.62
AC008878.3-201ENST00000617428 MTSS1LQ765P7 747 aa18.91■□□□□ 0.62
AC008878.3-201ENST00000617428 SLC22A9Q8IVM8 553 aa18.91■□□□□ 0.62
AC008878.3-201ENST00000617428 NLGN2Q8NFZ4 835 aa18.91■□□□□ 0.62
AC008878.3-201ENST00000617428 GRIN3AQ8TCU5 1115 aa18.91■□□□□ 0.62
AC008878.3-201ENST00000617428 MCOLN3Q8TDD5 553 aa18.91■□□□□ 0.62
AC008878.3-201ENST00000617428 FAM84AQ96KN4 292 aa18.91■□□□□ 0.62
AC008878.3-201ENST00000617428 PTPRHQ9HD43 1115 aa18.91■□□□□ 0.62
AC008878.3-201ENST00000617428 YDJCA8MPS7 323 aa18.91■□□□□ 0.62
AC008878.3-201ENST00000617428 SLC9A3R1O14745 358 aaPredicted RBP18.91■□□□□ 0.62
AC008878.3-201ENST00000617428 TOMM70O94826 608 aa18.91■□□□□ 0.62
AC008878.3-201ENST00000617428 OR56A5P0C7T3 313 aa18.91■□□□□ 0.62
AC008878.3-201ENST00000617428 SP100P23497 879 aaPredicted RBP18.91■□□□□ 0.62
AC008878.3-201ENST00000617428 ALDH9A1P49189 494 aa18.91■□□□□ 0.62
AC008878.3-201ENST00000617428 ZNF135P52742 658 aaPredicted RBP18.91■□□□□ 0.62
AC008878.3-201ENST00000617428 MAMLD1Q13495 774 aa18.91■□□□□ 0.62
AC008878.3-201ENST00000617428 ITGA7Q13683 1181 aa18.91■□□□□ 0.62
AC008878.3-201ENST00000617428 IL17AQ16552 155 aa18.91■□□□□ 0.62
AC008878.3-201ENST00000617428 FAM183BPQ6ZVS7 135 aa18.91■□□□□ 0.62
AC008878.3-201ENST00000617428 ANKRD52Q8NB46 1076 aa18.91■□□□□ 0.62
AC008878.3-201ENST00000617428 MYLPFQ96A32 169 aa18.91■□□□□ 0.62
AC008878.3-201ENST00000617428 C18orf25Q96B23 403 aaPredicted RBP18.91■□□□□ 0.62
AC008878.3-201ENST00000617428 ZDHHC6Q9H6R6 413 aa18.91■□□□□ 0.62
AC008878.3-201ENST00000617428 APPL1Q9UKG1 709 aa18.91■□□□□ 0.62
AC008878.3-201ENST00000617428 ZNF541Q9H0D2 1346 aa18.91■□□□□ 0.62
AC008878.3-201ENST00000617428 TRAV19A0A0A6YYK7 116 aa18.91■□□□□ 0.62
AC008878.3-201ENST00000617428 SLCO1B7G3V0H7 640 aa18.91■□□□□ 0.62
AC008878.3-201ENST00000617428 LBX2Q6XYB7 198 aa18.91■□□□□ 0.62
AC008878.3-201ENST00000617428 USP6NLQ92738 828 aa18.91■□□□□ 0.62
AC008878.3-201ENST00000617428 TM6SF2Q9BZW4 377 aa18.91■□□□□ 0.62
AC008878.3-201ENST00000617428 ZKSCAN7Q9P0L1 754 aaPredicted RBP18.91■□□□□ 0.62
AC008878.3-201ENST00000617428 CRYL1Q9Y2S2 319 aa18.91■□□□□ 0.62
AC008878.3-201ENST00000617428 ADH1AP07327 375 aa18.9■□□□□ 0.62
AC008878.3-201ENST00000617428 ZSCAN5DPP0CG00 497 aa18.9■□□□□ 0.62
AC008878.3-201ENST00000617428 SLC2A4P14672 509 aa18.9■□□□□ 0.62
AC008878.3-201ENST00000617428 TGM3Q08188 693 aa18.9■□□□□ 0.62
AC008878.3-201ENST00000617428 SETMARQ53H47 684 aaPredicted RBP18.9■□□□□ 0.62
AC008878.3-201ENST00000617428 PDPK2PQ6A1A2 396 aa18.9■□□□□ 0.62
AC008878.3-201ENST00000617428 TDRD5Q8NAT2 981 aaKnown RBP18.9■□□□□ 0.62
AC008878.3-201ENST00000617428 MYCBPAPQ8TBZ2 947 aa18.9■□□□□ 0.62
AC008878.3-201ENST00000617428 NXF3Q9H4D5 531 aaKnown RBP18.9■□□□□ 0.62
AC008878.3-201ENST00000617428 IMPAD1Q9NX62 359 aa18.9■□□□□ 0.62
AC008878.3-201ENST00000617428 HAO1Q9UJM8 370 aa18.9■□□□□ 0.62
AC008878.3-201ENST00000617428 CYP2A6P11509 494 aaPredicted RBP18.9■□□□□ 0.62
AC008878.3-201ENST00000617428 BRCC3P46736 316 aa18.9■□□□□ 0.62
AC008878.3-201ENST00000617428 ZNF438Q7Z4V0 828 aa18.9■□□□□ 0.62
AC008878.3-201ENST00000617428 HDAC7Q8WUI4 952 aa18.9■□□□□ 0.62
AC008878.3-201ENST00000617428 SH3BP4Q9P0V3 963 aa18.9■□□□□ 0.62
AC008878.3-201ENST00000617428 RAD51BO15315 384 aa18.9■□□□□ 0.62
AC008878.3-201ENST00000617428 RIPK2O43353 540 aa18.9■□□□□ 0.62
AC008878.3-201ENST00000617428 PSMA4P25789 261 aaKnown RBP18.9■□□□□ 0.62
AC008878.3-201ENST00000617428 RPL9P32969 192 aaKnown RBP18.9■□□□□ 0.62
AC008878.3-201ENST00000617428 ALDH6A1Q02252 535 aaKnown RBP18.9■□□□□ 0.62
AC008878.3-201ENST00000617428 MEA1Q16626 185 aa18.9■□□□□ 0.62
AC008878.3-201ENST00000617428 KATNAL2Q8IYT4 538 aa18.9■□□□□ 0.62
AC008878.3-201ENST00000617428 C12orf29Q8N999 325 aa18.9■□□□□ 0.62
AC008878.3-201ENST00000617428 BUD23O43709 281 aaKnown RBP18.9■□□□□ 0.62
AC008878.3-201ENST00000617428 PEX10O60683 326 aa18.9■□□□□ 0.62
AC008878.3-201ENST00000617428 PRKCIP41743 596 aa18.9■□□□□ 0.62
AC008878.3-201ENST00000617428 DPYSL3Q14195 570 aa18.9■□□□□ 0.62
AC008878.3-201ENST00000617428 PSMD5Q16401 504 aa18.9■□□□□ 0.62
AC008878.3-201ENST00000617428 DENND1CQ8IV53 801 aa18.9■□□□□ 0.62
AC008878.3-201ENST00000617428 SLC9A9Q8IVB4 645 aa18.9■□□□□ 0.62
AC008878.3-201ENST00000617428 ALBP02768 609 aa18.89■□□□□ 0.62
AC008878.3-201ENST00000617428 PTPN3P26045 913 aa18.89■□□□□ 0.62
AC008878.3-201ENST00000617428 CHKAP35790 457 aa18.89■□□□□ 0.62
AC008878.3-201ENST00000617428 ZNF143P52747 638 aaPredicted RBP18.89■□□□□ 0.62
AC008878.3-201ENST00000617428 THOP1P52888 689 aa18.89■□□□□ 0.62
AC008878.3-201ENST00000617428 CHRNB3Q05901 458 aa18.89■□□□□ 0.62
AC008878.3-201ENST00000617428 ATP13A4Q4VNC1 1196 aa18.89■□□□□ 0.62
AC008878.3-201ENST00000617428 AGKQ53H12 422 aa18.89■□□□□ 0.62
AC008878.3-201ENST00000617428 TRAPPC5Q8IUR0 188 aa18.89■□□□□ 0.62
AC008878.3-201ENST00000617428 FAM71AQ8IYT1 594 aa18.89■□□□□ 0.62
AC008878.3-201ENST00000617428 PPTC7Q8NI37 304 aa18.89■□□□□ 0.62
AC008878.3-201ENST00000617428 PPP1R10Q96QC0 940 aaKnown RBP18.89■□□□□ 0.62
AC008878.3-201ENST00000617428 TRPC4Q9UBN4 977 aa18.89■□□□□ 0.62
AC008878.3-201ENST00000617428 PLK1P53350 603 aa18.89■□□□□ 0.61
AC008878.3-201ENST00000617428 TBX2Q13207 712 aaPredicted RBP18.89■□□□□ 0.61
AC008878.3-201ENST00000617428 CYLC2Q14093 348 aaPredicted RBP18.89■□□□□ 0.61
AC008878.3-201ENST00000617428 DDR2Q16832 855 aa18.89■□□□□ 0.61
AC008878.3-201ENST00000617428 GRTP1Q5TC63 336 aa18.89■□□□□ 0.61
AC008878.3-201ENST00000617428 ZNF557Q8N988 423 aaPredicted RBP18.89■□□□□ 0.61
AC008878.3-201ENST00000617428 THAP11Q96EK4 314 aa18.89■□□□□ 0.61
AC008878.3-201ENST00000617428 MFSD1Q9H3U5 465 aa18.89■□□□□ 0.61
AC008878.3-201ENST00000617428 HIPK3Q9H422 1215 aa18.89■□□□□ 0.61
AC008878.3-201ENST00000617428 GIT1Q9Y2X7 761 aa18.89■□□□□ 0.61
AC008878.3-201ENST00000617428 UBDO15205 165 aa18.89■□□□□ 0.61
AC008878.3-201ENST00000617428 RASSF9O75901 435 aa18.89■□□□□ 0.61
AC008878.3-201ENST00000617428 FMO4P31512 558 aa18.89■□□□□ 0.61
AC008878.3-201ENST00000617428 GRK4P32298 578 aa18.89■□□□□ 0.61
AC008878.3-201ENST00000617428 CYP2C18P33260 490 aa18.89■□□□□ 0.61
AC008878.3-201ENST00000617428 SMAD3P84022 425 aaKnown RBP18.89■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms