RNA–Protein interactions for RNA: ENST00000616944.4

CBWD1-225, Transcript of COBW domain containing 1, humanhuman

TSL 2

Gene CBWD1, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-225ENST00000616944 GBE1Q04446 702 aa15.64■□□□□ 0.09
CBWD1-225ENST00000616944 SLC10A2Q12908 348 aaPredicted RBP15.64■□□□□ 0.09
CBWD1-225ENST00000616944 USP4Q13107 963 aa15.64■□□□□ 0.09
CBWD1-225ENST00000616944 CBX2Q14781 532 aaPredicted RBP15.64■□□□□ 0.09
CBWD1-225ENST00000616944 OASLQ15646 514 aaKnown RBP15.64■□□□□ 0.09
CBWD1-225ENST00000616944 CHSY1Q86X52 802 aa15.64■□□□□ 0.09
CBWD1-225ENST00000616944 NPWQ8N729 165 aa15.64■□□□□ 0.09
CBWD1-225ENST00000616944 MYRIPQ8NFW9 859 aa15.64■□□□□ 0.09
CBWD1-225ENST00000616944 NKD2Q969F2 451 aaPredicted RBP15.64■□□□□ 0.09
CBWD1-225ENST00000616944 IGSF8Q969P0 613 aa15.64■□□□□ 0.09
CBWD1-225ENST00000616944 PABPC5Q96DU9 382 aaKnown RBP15.64■□□□□ 0.09
CBWD1-225ENST00000616944 PRICKLE1Q96MT3 831 aaPredicted RBP15.64■□□□□ 0.09
CBWD1-225ENST00000616944 OLFM3Q96PB7 478 aa15.64■□□□□ 0.09
CBWD1-225ENST00000616944 KRT12Q99456 494 aa15.64■□□□□ 0.09
CBWD1-225ENST00000616944 FAM118BQ9BPY3 351 aa15.64■□□□□ 0.09
CBWD1-225ENST00000616944 FRMD8P1Q9BZ68 369 aaPredicted RBP15.64■□□□□ 0.09
CBWD1-225ENST00000616944 SLITRK6Q9H5Y7 841 aa15.64■□□□□ 0.09
CBWD1-225ENST00000616944 HOMER3Q9NSC5 361 aa15.64■□□□□ 0.09
CBWD1-225ENST00000616944 TDP1Q9NUW8 608 aa15.64■□□□□ 0.09
CBWD1-225ENST00000616944 CLDND1Q9NY35 253 aa15.64■□□□□ 0.09
CBWD1-225ENST00000616944 DTLQ9NZJ0 730 aa15.64■□□□□ 0.09
CBWD1-225ENST00000616944 CFAP97Q9P2B7 532 aa15.64■□□□□ 0.09
CBWD1-225ENST00000616944 PCYOX1Q9UHG3 505 aa15.64■□□□□ 0.09
CBWD1-225ENST00000616944 DNPEPQ9ULA0 475 aa15.64■□□□□ 0.09
CBWD1-225ENST00000616944 MYO18AQ92614 2054 aaKnown RBP15.63■□□□□ 0.09
CBWD1-225ENST00000616944 FSHRP23945 695 aa15.63■□□□□ 0.09
CBWD1-225ENST00000616944 COILP38432 576 aaPredicted RBP15.63■□□□□ 0.09
CBWD1-225ENST00000616944 NR2C2P49116 596 aa15.63■□□□□ 0.09
CBWD1-225ENST00000616944 ZNF77Q15935 545 aa15.63■□□□□ 0.09
CBWD1-225ENST00000616944 RWDD4Q6NW29 188 aaKnown RBP15.63■□□□□ 0.09
CBWD1-225ENST00000616944 CCDC137Q6PK04 289 aaKnown RBP15.63■□□□□ 0.09
CBWD1-225ENST00000616944 DDX42Q86XP3 938 aaKnown RBP eCLIP15.63■□□□□ 0.09
CBWD1-225ENST00000616944 ARID3BQ8IVW6 561 aaPredicted RBP15.63■□□□□ 0.09
CBWD1-225ENST00000616944 KLHL7Q8IXQ5 586 aa15.63■□□□□ 0.09
CBWD1-225ENST00000616944 SH3RF2Q8TEC5 729 aa15.63■□□□□ 0.09
CBWD1-225ENST00000616944 P3H4Q92791 437 aa15.63■□□□□ 0.09
CBWD1-225ENST00000616944 FGF13Q92913 245 aa15.63■□□□□ 0.09
CBWD1-225ENST00000616944 SLCO2A1Q92959 643 aa15.63■□□□□ 0.09
CBWD1-225ENST00000616944 MAGOHBQ96A72 148 aaKnown RBP15.63■□□□□ 0.09
CBWD1-225ENST00000616944 E2F8A0AVK6 867 aa15.62■□□□□ 0.09
CBWD1-225ENST00000616944 F5H5T6 163 aa15.62■□□□□ 0.09
CBWD1-225ENST00000616944 DAPK3O43293 454 aa15.62■□□□□ 0.09
CBWD1-225ENST00000616944 CTIFO43310 598 aaKnown RBP15.62■□□□□ 0.09
CBWD1-225ENST00000616944 RHOQP17081 205 aa15.62■□□□□ 0.09
CBWD1-225ENST00000616944 IGFBP4P22692 258 aa15.62■□□□□ 0.09
CBWD1-225ENST00000616944 VCPP55072 806 aaKnown RBP15.62■□□□□ 0.09
CBWD1-225ENST00000616944 ALFQ53S48 1182 aa15.62■□□□□ 0.09
CBWD1-225ENST00000616944 RFWD3Q6PCD5 774 aa15.62■□□□□ 0.09
CBWD1-225ENST00000616944 C1orf228Q6PIY5 440 aa15.62■□□□□ 0.09
CBWD1-225ENST00000616944 TMCO3Q6UWJ1 677 aa15.62■□□□□ 0.09
CBWD1-225ENST00000616944 LRRC31Q6UY01 552 aa15.62■□□□□ 0.09
CBWD1-225ENST00000616944 RTL3Q8N8U3 475 aaKnown RBP15.62■□□□□ 0.09
CBWD1-225ENST00000616944 GAS2L1Q99501 681 aaPredicted RBP15.62■□□□□ 0.09
CBWD1-225ENST00000616944 CDX2Q99626 313 aaPredicted RBP15.62■□□□□ 0.09
CBWD1-225ENST00000616944 ZYG11BQ9C0D3 744 aa15.62■□□□□ 0.09
CBWD1-225ENST00000616944 CATSPERBQ9H7T0 1116 aa15.62■□□□□ 0.09
CBWD1-225ENST00000616944 NDFIP2Q9NV92 336 aa15.62■□□□□ 0.09
CBWD1-225ENST00000616944 TMEM248Q9NWD8 314 aa15.62■□□□□ 0.09
CBWD1-225ENST00000616944 MPP6Q9NZW5 540 aa15.62■□□□□ 0.09
CBWD1-225ENST00000616944 STIM2Q9P246 746 aa15.62■□□□□ 0.09
CBWD1-225ENST00000616944 AMACRQ9UHK6 382 aa15.62■□□□□ 0.09
CBWD1-225ENST00000616944 LSM7Q9UK45 103 aaKnown RBP15.62■□□□□ 0.09
CBWD1-225ENST00000616944 ZNF510Q9Y2H8 683 aa15.62■□□□□ 0.09
CBWD1-225ENST00000616944 HEY1Q9Y5J3 304 aa15.62■□□□□ 0.09
CBWD1-225ENST00000616944 SCAMP3O14828 347 aaKnown RBP15.61■□□□□ 0.09
CBWD1-225ENST00000616944 CNTN5O94779 1100 aa15.61■□□□□ 0.09
CBWD1-225ENST00000616944 KCNJ1P48048 391 aa15.61■□□□□ 0.09
CBWD1-225ENST00000616944 SGSHP51688 502 aa15.61■□□□□ 0.09
CBWD1-225ENST00000616944 TUBB4BP68371 445 aa15.61■□□□□ 0.09
CBWD1-225ENST00000616944 BYSLQ13895 437 aaKnown RBP15.61■□□□□ 0.09
CBWD1-225ENST00000616944 TEX35Q5T0J7 233 aa15.61■□□□□ 0.09
CBWD1-225ENST00000616944 BBS7Q8IWZ6 715 aa15.61■□□□□ 0.09
CBWD1-225ENST00000616944 LGI2Q8N0V4 545 aa15.61■□□□□ 0.09
CBWD1-225ENST00000616944 CPXM2Q8N436 756 aa15.61■□□□□ 0.09
CBWD1-225ENST00000616944 SMRP1Q8NCR6 262 aa15.61■□□□□ 0.09
CBWD1-225ENST00000616944 ZSCAN18Q8TBC5 510 aaPredicted RBP15.61■□□□□ 0.09
CBWD1-225ENST00000616944 ASB16Q96NS5 453 aa15.61■□□□□ 0.09
CBWD1-225ENST00000616944 RPRD1AQ96P16 312 aaPredicted RBP15.61■□□□□ 0.09
CBWD1-225ENST00000616944 LRRC1Q9BTT6 524 aa15.61■□□□□ 0.09
CBWD1-225ENST00000616944 RETREG1Q9H6L5 497 aa15.61■□□□□ 0.09
CBWD1-225ENST00000616944 KIF9Q9HAQ2 790 aa15.61■□□□□ 0.09
CBWD1-225ENST00000616944 GDE1Q9NZC3 331 aa15.61■□□□□ 0.09
CBWD1-225ENST00000616944 SH3BP1Q9Y3L3 701 aa15.61■□□□□ 0.09
CBWD1-225ENST00000616944 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP15.61■□□□□ 0.09
CBWD1-225ENST00000616944 RAD51CO43502 376 aa15.61■□□□□ 0.09
CBWD1-225ENST00000616944 MAP3K6O95382 1288 aa15.61■□□□□ 0.09
CBWD1-225ENST00000616944 ITGAVP06756 1048 aa15.61■□□□□ 0.09
CBWD1-225ENST00000616944 SERPINB6P35237 376 aa15.61■□□□□ 0.09
CBWD1-225ENST00000616944 PTGIRP43119 386 aa15.61■□□□□ 0.09
CBWD1-225ENST00000616944 XRCC4Q13426 336 aa15.61■□□□□ 0.09
CBWD1-225ENST00000616944 SNX1Q13596 522 aa15.61■□□□□ 0.09
CBWD1-225ENST00000616944 DHX34Q14147 1143 aaKnown RBP15.61■□□□□ 0.09
CBWD1-225ENST00000616944 ATAT1Q5SQI0 421 aa15.61■□□□□ 0.09
CBWD1-225ENST00000616944 AFMIDQ63HM1 303 aa15.61■□□□□ 0.09
CBWD1-225ENST00000616944 CES5AQ6NT32 575 aa15.61■□□□□ 0.09
CBWD1-225ENST00000616944 C8orf74Q6P047 294 aa15.61■□□□□ 0.09
CBWD1-225ENST00000616944 GET4Q7L5D6 327 aaPredicted RBP15.61■□□□□ 0.09
CBWD1-225ENST00000616944 ARHGAP12Q8IWW6 846 aa15.61■□□□□ 0.09
CBWD1-225ENST00000616944 TP53INP2Q8IXH6 220 aa15.61■□□□□ 0.09
CBWD1-225ENST00000616944 KIAA1958Q8N8K9 716 aa15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms