RNA–Protein interactions for RNA: ENST00000616253.1

AL353770.3-201, humanhuman

TSL 1 (best) BASIC

Gene AL353770.3, Length 1,988 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL353770.3-201ENST00000616253 KCNK1O00180 336 aa10.3□□□□□ -0.76
AL353770.3-201ENST00000616253 NCAM2O15394 837 aa10.3□□□□□ -0.76
AL353770.3-201ENST00000616253 TBX18O95935 607 aa10.3□□□□□ -0.76
AL353770.3-201ENST00000616253 LAG3P18627 525 aa10.3□□□□□ -0.76
AL353770.3-201ENST00000616253 SSTR1P30872 391 aa10.3□□□□□ -0.76
AL353770.3-201ENST00000616253 HOXC13P31276 330 aa10.3□□□□□ -0.76
AL353770.3-201ENST00000616253 HTR7P34969 479 aa10.3□□□□□ -0.76
AL353770.3-201ENST00000616253 FDFT1P37268 417 aa10.3□□□□□ -0.76
AL353770.3-201ENST00000616253 ELK3P41970 407 aa10.3□□□□□ -0.76
AL353770.3-201ENST00000616253 PSEN1P49768 467 aa10.3□□□□□ -0.76
AL353770.3-201ENST00000616253 TBX4P57082 545 aa10.3□□□□□ -0.76
AL353770.3-201ENST00000616253 GUCY1A3Q02108 690 aa10.3□□□□□ -0.76
AL353770.3-201ENST00000616253 CCDC38Q502W7 563 aa10.3□□□□□ -0.76
AL353770.3-201ENST00000616253 C10orf120Q5SQS8 335 aa10.3□□□□□ -0.76
AL353770.3-201ENST00000616253 PIK3R6Q5UE93 754 aa10.3□□□□□ -0.76
AL353770.3-201ENST00000616253 CAND1Q86VP6 1230 aaKnown RBP10.3□□□□□ -0.76
AL353770.3-201ENST00000616253 MIB1Q86YT6 1006 aa10.3□□□□□ -0.76
AL353770.3-201ENST00000616253 IGDCC3Q8IVU1 814 aa10.3□□□□□ -0.76
AL353770.3-201ENST00000616253 CMTR2Q8IYT2 770 aaKnown RBP10.3□□□□□ -0.76
AL353770.3-201ENST00000616253 ZNF567Q8N184 647 aa10.3□□□□□ -0.76
AL353770.3-201ENST00000616253 TMEM199Q8N511 208 aa10.3□□□□□ -0.76
AL353770.3-201ENST00000616253 COLGALT1Q8NBJ5 622 aa10.3□□□□□ -0.76
AL353770.3-201ENST00000616253 MCUQ8NE86 351 aa10.3□□□□□ -0.76
AL353770.3-201ENST00000616253 DEPDC1BQ8WUY9 529 aa10.3□□□□□ -0.76
AL353770.3-201ENST00000616253 HDAC11Q96DB2 347 aa10.3□□□□□ -0.76
AL353770.3-201ENST00000616253 SLC39A13Q96H72 371 aa10.3□□□□□ -0.76
AL353770.3-201ENST00000616253 CLSTN3Q9BQT9 956 aa10.3□□□□□ -0.76
AL353770.3-201ENST00000616253 HERC2P3Q9BVR0 1158 aa10.3□□□□□ -0.76
AL353770.3-201ENST00000616253 FRMD8Q9BZ67 464 aaPredicted RBP10.3□□□□□ -0.76
AL353770.3-201ENST00000616253 OLA1Q9NTK5 396 aaKnown RBP10.3□□□□□ -0.76
AL353770.3-201ENST00000616253 LGALS13Q9UHV8 139 aa10.3□□□□□ -0.76
AL353770.3-201ENST00000616253 SLC12A6Q9UHW9 1150 aa10.3□□□□□ -0.76
AL353770.3-201ENST00000616253 E9PAM4 449 aa10.29□□□□□ -0.76
AL353770.3-201ENST00000616253 FGF10O15520 208 aaPredicted RBP10.29□□□□□ -0.76
AL353770.3-201ENST00000616253 EFCAB14O75071 495 aa10.29□□□□□ -0.76
AL353770.3-201ENST00000616253 CDH16O75309 829 aa10.29□□□□□ -0.76
AL353770.3-201ENST00000616253 ZNF189O75820 626 aaPredicted RBP10.29□□□□□ -0.76
AL353770.3-201ENST00000616253 APOEP02649 317 aa10.29□□□□□ -0.76
AL353770.3-201ENST00000616253 SLC2A3P11169 496 aa10.29□□□□□ -0.76
AL353770.3-201ENST00000616253 PTPN3P26045 913 aa10.29□□□□□ -0.76
AL353770.3-201ENST00000616253 PSMB4P28070 264 aa10.29□□□□□ -0.76
AL353770.3-201ENST00000616253 GCAP28676 217 aa10.29□□□□□ -0.76
AL353770.3-201ENST00000616253 ATP5DP30049 168 aa10.29□□□□□ -0.76
AL353770.3-201ENST00000616253 PHBP35232 272 aa10.29□□□□□ -0.76
AL353770.3-201ENST00000616253 GARSP41250 739 aaKnown RBP10.29□□□□□ -0.76
AL353770.3-201ENST00000616253 DSG1Q02413 1049 aa10.29□□□□□ -0.76
AL353770.3-201ENST00000616253 ARTNQ5T4W7 220 aa10.29□□□□□ -0.76
AL353770.3-201ENST00000616253 ZNF534Q76KX8 674 aa10.29□□□□□ -0.76
AL353770.3-201ENST00000616253 C14orf80Q86SX3 495 aa10.29□□□□□ -0.76
AL353770.3-201ENST00000616253 PALM2Q8IXS6 379 aa10.29□□□□□ -0.76
AL353770.3-201ENST00000616253 AGGF1Q8N302 714 aaeCLIP10.29□□□□□ -0.76
AL353770.3-201ENST00000616253 SELENOSQ9BQE4 189 aa10.29□□□□□ -0.76
AL353770.3-201ENST00000616253 TTLL2Q9BWV7 592 aa10.29□□□□□ -0.76
AL353770.3-201ENST00000616253 BRD8Q9H0E9 1235 aa10.29□□□□□ -0.76
AL353770.3-201ENST00000616253 CATSPERBQ9H7T0 1116 aa10.29□□□□□ -0.76
AL353770.3-201ENST00000616253 TMEM51Q9NW97 253 aa10.29□□□□□ -0.76
AL353770.3-201ENST00000616253 MARCH2Q9P0N8 246 aa10.29□□□□□ -0.76
AL353770.3-201ENST00000616253 KLHL8Q9P2G9 620 aaPredicted RBP10.29□□□□□ -0.76
AL353770.3-201ENST00000616253 AFF4Q9UHB7 1163 aaKnown RBP10.29□□□□□ -0.76
AL353770.3-201ENST00000616253 TBK1Q9UHD2 729 aa10.29□□□□□ -0.76
AL353770.3-201ENST00000616253 TEX264Q9Y6I9 313 aa10.29□□□□□ -0.76
AL353770.3-201ENST00000616253 NYNRINQ9P2P1 1898 aaKnown RBP10.29□□□□□ -0.76
AL353770.3-201ENST00000616253 POC1B-GALNT4F8VUJ3 575 aa10.28□□□□□ -0.76
AL353770.3-201ENST00000616253 DFFAO00273 331 aa10.28□□□□□ -0.76
AL353770.3-201ENST00000616253 SEC24AO95486 1093 aa10.28□□□□□ -0.76
AL353770.3-201ENST00000616253 HMBSP08397 361 aa10.28□□□□□ -0.76
AL353770.3-201ENST00000616253 ZDHHC11BP0C7U3 371 aa10.28□□□□□ -0.76
AL353770.3-201ENST00000616253 TSHRP16473 764 aa10.28□□□□□ -0.76
AL353770.3-201ENST00000616253 MDH1P40925 334 aaKnown RBP10.28□□□□□ -0.76
AL353770.3-201ENST00000616253 TUFMP49411 452 aaKnown RBP10.28□□□□□ -0.76
AL353770.3-201ENST00000616253 TUBP50607 506 aa10.28□□□□□ -0.76
AL353770.3-201ENST00000616253 IRAK1P51617 712 aa10.28□□□□□ -0.76
AL353770.3-201ENST00000616253 NRG1Q02297 640 aaPredicted RBP10.28□□□□□ -0.76
AL353770.3-201ENST00000616253 EFTUD2Q15029 972 aaKnown RBP eCLIP10.28□□□□□ -0.76
AL353770.3-201ENST00000616253 TMED2Q15363 201 aa10.28□□□□□ -0.76
AL353770.3-201ENST00000616253 TRIP4Q15650 581 aaPredicted RBP10.28□□□□□ -0.76
AL353770.3-201ENST00000616253 C3orf62Q6ZUJ4 267 aa10.28□□□□□ -0.76
AL353770.3-201ENST00000616253 OTOP2Q7RTS6 562 aa10.28□□□□□ -0.76
AL353770.3-201ENST00000616253 CYP4X1Q8N118 509 aa10.28□□□□□ -0.76
AL353770.3-201ENST00000616253 RIBC1Q8N443 379 aaPredicted RBP10.28□□□□□ -0.76
AL353770.3-201ENST00000616253 FBF1Q8TES7 1133 aa10.28□□□□□ -0.76
AL353770.3-201ENST00000616253 ARHGEF2Q92974 986 aaKnown RBP10.28□□□□□ -0.76
AL353770.3-201ENST00000616253 CFAP36Q96G28 342 aa10.28□□□□□ -0.76
AL353770.3-201ENST00000616253 YME1L1Q96TA2 773 aa10.28□□□□□ -0.76
AL353770.3-201ENST00000616253 TMEM106CQ9BVX2 250 aa10.28□□□□□ -0.76
AL353770.3-201ENST00000616253 CCSER2Q9H7U1 834 aa10.28□□□□□ -0.76
AL353770.3-201ENST00000616253 CNOT10Q9H9A5 744 aaKnown RBP10.28□□□□□ -0.76
AL353770.3-201ENST00000616253 EURLQ9NYK6 297 aa10.28□□□□□ -0.76
AL353770.3-201ENST00000616253 SPG21Q9NZD8 308 aa10.28□□□□□ -0.76
AL353770.3-201ENST00000616253 RABGEF1Q9UJ41 708 aa10.28□□□□□ -0.76
AL353770.3-201ENST00000616253 SLC12A8A0AV02 714 aa10.28□□□□□ -0.76
AL353770.3-201ENST00000616253 A6NNZ2 444 aa10.28□□□□□ -0.76
AL353770.3-201ENST00000616253 FOXO6A8MYZ6 492 aa10.28□□□□□ -0.76
AL353770.3-201ENST00000616253 MTSS1O43312 755 aa10.28□□□□□ -0.76
AL353770.3-201ENST00000616253 TLR5O60602 858 aa10.28□□□□□ -0.76
AL353770.3-201ENST00000616253 BAIAP3O94812 1187 aa10.28□□□□□ -0.76
AL353770.3-201ENST00000616253 URODP06132 367 aa10.28□□□□□ -0.76
AL353770.3-201ENST00000616253 ATP2A2P16615 1042 aaKnown RBP10.28□□□□□ -0.76
AL353770.3-201ENST00000616253 MMP13P45452 471 aa10.28□□□□□ -0.76
AL353770.3-201ENST00000616253 ZBTB17Q13105 803 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms